Labrus mixtus (cuckoo wrasse): 132980895
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Entry
132980895 CDS
T10666
Symbol
supt5h
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03250
Viral life cycle - HIV-1
Brite
Transcription machinery [BR:
lmix03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
132980895 (supt5h)
RNA polymerase I system
132980895 (supt5h)
Messenger RNA biogenesis [BR:
lmix03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
132980895 (supt5h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132980895
NCBI-ProteinID:
XP_060903254
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Position
9:28971474..28991922
Genome browser
AA seq
1090 aa
AA seq
DB search
MSDSDDSDFSDNQSERSSDGEAEEVENEEETASPVGSDKVAEEEGEDLEDEEEYDEEEEE
DDDERPRKKPRHGGFILDEADVDDEYEDEEDQWEEGAEDILEKAEEAEVSNIDHVVLDED
HSGSRRLQNLWRDSREEALGEYYMRKYAKSSGGEHFSGGSEELSDDITQQQLLPGVKDPN
LWTVKCKIGEERATAIALMRKFIAYQFTDTPLQIKSVVAPDHVKGYIYVESYKQTHVKSA
IEGIGNLRMGLWNQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGLYKDDIAQVDYVEP
SQNTISLKMIPRIDLDRIKAKMSLKDWFAKRKKFKRPAQRLFDAEKIRSLGGEVSHDGDF
MIFEGNRYSRKGFLFKSFAMSAVITDGVKPTLSELEKFEDQPEGIDLEVVTESGKEREHN
LQAGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDPLEFPAHELRKYFRMGDHVK
VIAGRYEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDAGGQHEWGEL
VQLDPQTVGVIVRLERETFQVLNMHGKVMTVRHQAVNRRKDNRFAVALDSEQNNIHVKDI
VKVIDGPHSGREGEIRHLFRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTV
GGFAPMSPRISSPMHHGGGGAQQRGGGGGGGGGGGGGGGMGRGRGRRDNELIGQTVRISQ
GPYKGYIGVVKDATESTARVELHSTCQTISVDRQRLTTMGAKRPSGMTSAHGRTPSYGSQ
TPMYGTGSRTPMYGSQTPLHDGSRTPHYGSQTPLHDGSRTPGQSGAWDPSNPNTPSRNDE
EYDFGFDDEPSPSPQGYGGTPNPQTPGYPEVPSPQVNPQYNPQTPGTPAMYNTEQYSPYA
APSPQGSYQPSPSPQSYHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMT
PGAPSPGGYNPHTPGSNIEQGGSDWVTTDILVRVKDSLMDLMGQMGVIRSVTGGMCSVFM
QESEKVVSISSDHLEPVTPTKNNKVKVILGEDREATGILLSIDGDDGIVRMELDDQLKIL
NLRFLGRLEH
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagcgatgacagcgacttctccgacaaccagagtgagcgcagcagcgacgga
gaggcggaggaggtggagaatgaggaggagacagccagccctgtaggcagcgacaaggta
gcagaggaggagggagaagacctggaggatgaggaggagtatgatgaagaggaggaagag
gatgatgatgaacgtcccagaaagaagccaagacacgggggctttatcctggatgaagcc
gatgtggatgatgagtatgaggacgaggaggatcagtgggaggagggagctgaagatatt
ctggagaaagcagaggaggccgaggtgtcgaacatcgaccatgtggttctggatgaagat
cactctggatccaggaggctgcagaacctctggagagactccagagaggaagctctgggt
gaatactacatgaggaagtatgccaagtcgtctggaggggagcatttctctggagggtcc
gaggagctctctgatgacatcactcagcagcagctacttcctggagtcaaggatcccaat
ctgtggacggtcaagtgtaagatcggagaggagagggcgacggccatcgcattgatgagg
aaattcatcgcctaccagttcacagacacgcctctgcagatcaagtccgtggtcgccccg
gatcacgtcaaaggttacatctacgtggagtcgtacaaacagacgcacgtcaagtcggcc
atcgagggcatcgggaacctgaggatgggtctgtggaaccagcagatggtcccaatcaaa
gagatgacggacgtcctcaaggtcgtcaaagaggtcaccaacctgaagcccaagtcctgg
gtccgactgaagagaggcttgtacaaagacgacatcgctcaggtggactacgtggagccg
agtcagaacaccatctccctgaagatgatccctcgcatagacctggaccgcatcaaggcc
aagatgagcctgaaagactggttcgctaagaggaagaagtttaagagacctgctcagaga
ctgtttgatgctgaaaagatcaggtccctcggtggggaggtcagccacgacggagacttc
atgatctttgaggggaaccgttacagccgcaagggattcctgttcaagagctttgccatg
tcggctgtgatcacagacggagtgaagcccactctgtccgagctggagaagtttgaagac
cagcctgaaggaatcgacctggaggtggtcactgagtcaggtaaggagcgtgaacacaac
ctgcaggccggggataacgtggaggtgtgtgagggagagttgatcaacctgcagggaaaa
atcctcagtgtggacggaaacaagatcaccatcatgcccaaacacgaagacctgaaggac
cctctggagttcccggctcacgagttgagaaaatacttccgcatgggcgaccacgtgaag
gtgatcgccgggcgctacgagggagacacgggcctcatcgtcagagtggaggagaacttt
gtcatcctgttctccgacctcaccatgcacgagttgaaggtgttgcccagagacctgcag
ctctgctcggagacggcgtccggcgtcgacgcaggagggcagcatgagtggggggagctg
gtccagctggacccccagactgtgggagtcatcgtcagactggagagggagacgtttcag
gtgctcaacatgcacgggaaggttatgacggttcggcaccaggcggtgaaccgcaggaag
gacaaccgcttcgctgtggcgctggactcagagcagaacaacatccacgtcaaggacatc
gtcaaggtcatcgacgggccgcactctggccgtgaaggtgagatccgtcacctgttccga
ggcttcgccttcctgcactgtaagaagctggtggagaacggaggcatgttcgtgtgtaag
acgaggcacctggtgttagctggaggatccaagcccagagacgtgaccaacttcaccgtg
ggaggatttgctccgatgagtcctcgtatcagcagccccatgcaccacggcggaggaggt
gctcaacagagaggaggaggagggggaggtggtggaggaggaggaggaggaggaggaatg
gggcggggccgagggcggagagacaacgagctgattggtcagacggtccgtatctcccaa
ggtccttacaaaggttacatcggcgtggtgaaggacgccacagagtcgacggcccgagta
gagctgcactccacctgtcagaccatctctgtagacagacagcgcctcaccaccatgggc
gcaaagagaccgagtggaatgacctccgcccacggccgtactcccagctacggctcgcag
actcccatgtacggtacgggctccaggacgcccatgtatgggtctcaaacgccgctgcat
gacggaagtcgcacacctcactacggctctcagaccccactgcatgatgggagcaggacg
ccaggtcagagcggagcctgggaccccagcaaccccaacacaccttcccggaacgacgag
gagtacgatttcggcttcgacgacgagccctcaccgtcccctcagggctacggggggacc
cccaacccccagaccccgggttacccagaagtcccgtctccacaggtcaaccctcagtac
aaccctcagacacctggcacacctgctatgtataacaccgagcagtattccccctacgcg
gcgccgtcacctcagggctcataccagcccagccccagtcctcagagctaccaccaggtg
gcgccctcgccggtcggctaccagaacacacactctcctgccagctaccatccgacgccc
tcgcccatggcataccaggctagtcccagtcccagtcctgtgggctacagtcccatgact
cccggagcgccctctcctggaggttacaaccctcacacccccggctccaacatcgagcag
ggcggcagcgactgggtgaccacggacatcctggtccgggtcaaggactccttaatggac
ctgatgggacagatgggggtcatcaggagcgtcacgggagggatgtgttcagtgttcatg
caggagtcggagaaggtggtcagtatcagcagtgatcacctggagcccgtcaccccgacc
aagaacaacaaggtgaaggtgattctgggagaagaccgcgaggccacggggatcctcctg
agtatagacggagacgacggcatcgtccgcatggagctggacgaccagcttaagatcctc
aacctgcggttcctgggacgcctggagcactga
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