Labrus mixtus (cuckoo wrasse): 132980928 Help Entry 132980928         CDS       T10666                                  Symbol col4a3 Name (RefSeq) collagen alpha-5(IV) chain   KO K06237   collagen type IV alpha Organism lmix  Labrus mixtus (cuckoo wrasse) Pathway lmix04382   Cornified envelope formation lmix04510   Focal adhesion lmix04512   ECM-receptor interaction lmix04518   Integrin signaling lmix04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:lmix00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     132980928 (col4a3)    04518 Integrin signaling     132980928 (col4a3)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     132980928 (col4a3)   09142 Cell motility    04820 Cytoskeleton in muscle cells     132980928 (col4a3)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     132980928 (col4a3)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:lmix04147]     132980928 (col4a3)    00536 Glycosaminoglycan binding proteins [BR:lmix00536]     132980928 (col4a3) Exosome [BR:lmix04147]  Exosomal proteins   Exosomal proteins of other cancer cells    132980928 (col4a3) Glycosaminoglycan binding proteins [BR:lmix00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    132980928 (col4a3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  132980928 NCBI-ProteinID:  XP_060903290 LinkDB All DBs Position 9:29863603..29902108 Genome browser AA seq 1667 aa AA seqDB search MEAPGGPRRRIVSLLVLLVCCSAAPGHAERVCHCSGKSLCHCDGVKGQKGEPGYLGYDGL PGVIGYPGNEGNQGLNGEKGDPGAGGSPGLKGSRGLSGKPGFPGSPGLPGLPGHEGPIGR PGLPGCNGTKGDVGYPGYSGDPGSVGLPGRPGLRGTKGHTYAFPTTGEIKGAQGPQGPDG KNGLSGNPGVPGLPGPPGSAGLPGRSGLPGLPGEKGQEGPSPVIPGPRGQRGHRGPTGIP GPKGIKLYIEGPTELKGEPGEVGQKGCRGLLGVSGKLGDKGQKGERGDPGTLGKPGKNGV IGELGLPGDPGDRGYLGPPGIEGARGETGDRGFPGLPGETVWSYRFLKGQPGAPGSLGPP GFPGQQGLIGFPGLQGEPGLAPTGPPGLQGPPGSTGTKGDQGQPGPFIIGPPGQDGVPGG PGVDGEPGEPGIPDFLPGDVGPPGSKGLKGLTGFPGIRGDEGQTGEKGDLCYICSPLPGP PAPPGRPGEPGEDGLPGSAGFLGPKGNKGFKGIGGPPGSQGTFGSPGVQGSTGPVGDPGV MWRVGQKGEDGDPGQPGPPGFEGADGVPGAAGPKGVLGERGNPGPLGEKGERGPLGETGA RGLLGQMGPPGPPGIGAPGPPGPKGNVGVLGPRGDPGKPGDKGSPGEIQTYPGNPGPEGE KGLPGNPGPEGVTGPPGVPGFAGPKGEKGDKGFSVQGPPGFPGVKGNKGVPGGPGLPSFG IKGRAGPSGPPGMPGSKGDRGIGFPGQQGRSGPQGEDGSVGPQGDPGLQGSDGAPGAPGQ DGPPGPKGHRGLDGITGPVGPVGVCLPGATGPEGERGSMGVIGFTGNRGPKGLKGDPGLP GIGAIGSQGPYGAPGFNGDKGLVGEVGLKGLSGANGEPGSPGIRGDVGPPGAPGSPGEDG KPGETGQLGQKGDDGVDGVKGSQGPVGIQGDRGAPGPKGIQTSVAVYGDPGDPGDPGPQG FTGLKGERGPMGPQGPDGSDSRSGNPGPQGPTGEPGSKGQNGPPGPFELNGNQGVMGIPG YKGEKGSTGPCGSAGLNGIPGPGGSKGPKGEPSPPGPGSKGFLGEKGNAGCPGPQGTKGT PGDLGVPGTPGECGPCGPKGEKGPPGCRGPPGPSGEKSCDGPSGKNGPPGPTGLTGNKGP PGDPGPAGLRGNQGQDGIPGPPGEKGAMGAPGNGPQGREGRKGPPGCAGEQGPPGPCGPP GPSGLGGHPGCTGPPGPPGPPGCPGKEGICIEGAKGESGFPGGRGPKGSNGCRGPPGPPG PGFKGEKGNKGATGNSGPPGCLGEPGQQGRRGEDRPPGPPGQKGLMGYTGVSGPIGLKGE EGPPGSVGLRGPPGPPGRRGEMGKDVTREVVLIPGDPGIPGEQGPLGQMGPPGSRGSSGG PGPKGFRGGAGGRGVDGGPGLKGDQGEPGYPGVKGLEGFRGAVGSKGPRGWPGSIREAPE HDGFLFTRHSQELFIPECPAGSAQVYSGYSLLFINGNNRAHGQDLGTLGSCLPRFTTMPF LFCGTDRTCRYAARNDYSYWLSTDETLPSSMPFISGDSLKNYISRCTVCEARANVIAVHS QTSLIPNCPSGWDPLWFGYSFVMETGVGAEGSGQPLASPGSCLENFRKIPFIECHGRGTC NYYTDSYSYWLAALNPNDMFSKPKPQADTGAFPGSLIGRCRVCMKSL NT seq 5004 nt NT seq  +upstreamnt  +downstreamnt atggaggctccgggcggcccgagacggaggatcgtgtcactgctggttctgctggtgtgc tgctccgctgctccgggacacgccgagagggtctgtcactgcagcgggaagtctctctgt cactgtgacggcgtcaaaggccaaaagggtgaaccgggttacctcggatacgatgggctt cctggggtgattggttaccctggaaacgagggcaaccagggcttaaatggagaaaagggc gatccaggagctggagggagtccaggactgaaaggttcacgaggtctttcaggaaaacca ggtttcccaggatctccaggactgcctggactccctggacatgaaggacccatcggccga ccaggactcccaggatgcaacgggacaaagggggatgttggttacccagggtactccggg gatcctggatctgtcggtctcccaggacgacctggactgcgaggcacaaagggacacacg tacgccttcccaacaactggagaaatcaagggagcacaaggaccgcagggaccagatgga aaaaatgggctgagtggaaatccaggtgtaccaggtctgccaggaccacctggatctgct ggacttcctggacgttccgggttgccgggtcttcctggagagaagggtcaggagggtccc agtccagtgatacctggtccccgcgggcagaggggacaccgcggaccaactgggatccct ggacccaaaggaatcaagctgtatatagagggacccacagagctgaagggagaaccaggg gaagtcggacagaaaggctgtcgtggacttcttggtgtgtcggggaaactgggggacaaa ggacagaagggcgagcgaggagatccgggcacacttggtaaacctgggaagaatggagtc attggagagcttggattaccgggagacccaggggatcgtgggtaccttggccctccaggt attgaaggagccaggggggagacaggtgatcggggttttccaggtcttccaggagagaca gtctggagttatagatttctgaagggccagcctggggcaccgggatctctcggaccccca ggattccccgggcaacaaggactcattgggtttccaggactgcagggcgagccaggcctg gctcctactggtccaccgggtctccaggggccaccgggctcaactggaactaaaggagat caaggacagccagggcccttcatcatagggcccccaggacaggatggtgtcccgggaggt cctggagttgatggagaacctggagaacctggaataccagatttcctgccgggagatgtt ggtcctcccgggtctaaaggtctgaaaggcctgacgggatttcctggaatcagaggggac gaagggcagacgggtgagaagggggacctgtgctatatctgctctcctttaccaggccct cctgcacctccaggtagaccaggagagccaggggaagacggactgccaggctcagctggt ttccttggacccaaaggtaacaaagggttcaaaggtattggaggaccacctggttcacag ggcaccttcggtagccctggcgtccagggctctacaggacctgtcggtgaccctggagtc atgtggagggttgggcagaagggtgaggatggggatcctgggcaaccaggaccaccaggt tttgagggggctgatggagttccaggagcagcaggaccaaaaggtgttctgggagagaga ggaaaccccggacctctgggggaaaaaggtgagaggggcccattaggcgaaactggtgcc agaggactgttaggacagatgggacctccaggaccacctgggataggggctccaggacct ccaggacctaaaggcaatgttggagtcctgggaccccgaggagatcctggaaaaccagga gacaaaggttctccaggtgaaatccagacctatccgggaaatccaggaccggaaggagag aaaggtctaccaggaaaccctggccctgaaggtgtgacaggacctccaggtgttccagga tttgccggtccaaagggagaaaagggagataaaggattttcagtccaggggcctccaggc ttcccaggggtcaaaggaaacaaaggtgttccaggaggcccaggtttaccaagttttggt atcaagggacgggcagggccatcaggcccgccagggatgccgggctccaagggggacagg gggattggttttccaggtcagcagggtcgctcaggcccccaaggagaagatggctcagtg gggccacaaggagaccctggacttcaagggtcagatggggctccaggagctccaggacaa gatggaccgccaggaccaaaaggtcatagaggtctggatggtattaccggtcctgtcggt cctgttggagtgtgtttacctggagctactggtcctgaaggagagcgcggatcaatgggt gtcattggattcacagggaaccgtggcccaaagggtttgaagggcgaccctgggctgcca ggcattggagccattgggtctcaagggccatatggggccccagggtttaatggagataaa gggctagtaggagaagttggactgaagggcttgagtggggccaatggggagccaggaagt ccaggtatcagaggggacgtgggtcctccaggagcgcctgggagtccaggggaggatgga aaaccaggagagaccggtcaacttggacagaaaggtgatgatggtgttgatggggttaag ggttctcaggggcctgttgggattcaaggagaccgaggagcaccaggaccaaaaggaatc caaacatccgtggcagtgtacggagaccctggagacccaggagatcctggaccccaaggt ttcactggtttgaagggagagaggggccccatgggtccccagggcccagatggcagcgac agtagatctggaaaccccgggccacagggacctacaggagaacccgggagtaaaggacag aacggacctcctggtccttttgaactcaacggtaaccaaggagttatggggattccaggc tacaaaggtgagaaaggctctacaggaccgtgtggatcagctggtttaaatggaatacca ggaccaggaggatcaaaaggccctaaaggagaaccaagcccacctggaccaggatccaaa ggatttctaggagagaaggggaatgcagggtgtcctggtcctcaaggtacaaaggggacc ccaggggacttgggagtccctggtaccccgggagaatgtggtccctgcggtcctaaagga gagaaaggacccccaggatgcagaggtcctccagggccttctggtgaaaagagctgtgat ggaccttctggaaaaaatggccctccaggacccacaggcctcacaggaaacaaggggcct cctggagatcctggtccagctggtctcagaggaaaccagggacaggacgggatacctgga cctcctggagaaaaaggagccatgggagctcctgggaacgggccccagggccgggaggga aggaaaggtccacctgggtgtgctggggaacagggtccacctggcccctgtgggcctcct ggtccctctggtcttggtggacatccaggttgtactggtcctcctggaccccctggtcca cctggttgtcctggcaaggagggaatttgcattgaaggagccaaaggagaaagtggattc ccaggaggacgaggacccaaaggttcaaatggctgccgaggtcctccaggtcctccaggt cctggttttaaaggagagaagggaaacaaaggagcaacaggaaactcaggaccacctgga tgtcttggtgaacctggacaacaaggcaggcggggtgaagacagaccacctggcccacct ggacagaaaggcctgatggggtacacaggtgtatcaggacccatcggtctaaagggggag gaaggaccgccaggaagcgttggcttacgaggacctccaggaccacctgggaggagaggt gagatggggaaggacgtaaccagggaagtggtgctgataccaggagacccaggcataccc ggagaacagggacccctaggacaaatgggcccacccgggtccagagggagttctggaggt ccaggccctaagggcttcaggggcggggcaggtggacgaggagtcgatggtggacctgga ctgaaaggagatcagggagaaccaggataccccggagtaaaaggtctcgaaggtttccga ggtgcggtcggctctaagggtcctcgaggttggccgggttccatcagagaggccccggag cacgacggcttcctgtttacgagacacagccaggaactctttatcccagaatgccctgcg ggatcagctcaagtgtacagcggatactcactgctgttcatcaatgggaacaaccgagct cacggacaggacctgggtaccttaggtagttgtctccctcgttttaccaccatgcccttc ctgttctgtggcactgacaggacctgtcgctacgccgcacgcaacgactactcctattgg ctgtccaccgatgaaacacttcccagcagcatgcccttcatctccggggactcactgaag aactacatcagccggtgtaccgtctgtgaagccagagccaacgtgatcgctgtccacagt cagaccagcttgattccaaactgtccgtcaggctgggaccctctctggtttggatactcc ttcgtcatggaaacgggagtcggggcagagggatccggtcagcctctggcttctcctgga tcgtgtttggaaaacttccggaagattcccttcatcgagtgtcacggccgaggaacctgc aactactacacggactcgtacagctactggctggctgctctcaaccccaacgacatgttc agtaaaccgaagcctcaggcggacaccggagcgtttccaggaagtctgatcggccgctgt cgagtgtgtatgaagagtctgtga

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