Labrus mixtus (cuckoo wrasse): 132980990
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Entry
132980990 CDS
T10666
Symbol
atg16l1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04136
Autophagy - other
lmix04140
Autophagy - animal
lmix04145
Phagocytosis
lmix04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
132980990 (atg16l1)
04140 Autophagy - animal
132980990 (atg16l1)
04136 Autophagy - other
132980990 (atg16l1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
132980990 (atg16l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmix04131
]
132980990 (atg16l1)
03029 Mitochondrial biogenesis [BR:
lmix03029
]
132980990 (atg16l1)
Membrane trafficking [BR:
lmix04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
132980990 (atg16l1)
Others
Specific organelles associated proteins
Auto phagosome
132980990 (atg16l1)
Mitochondrial biogenesis [BR:
lmix03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
132980990 (atg16l1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
ATG16
WD40
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
EIF3I
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_NOL10_N
WD40_RFWD3
Beta-prop_NWD2_C
Beta-prop_VPS8
CFAP251_N
Beta-prop_ACSF4
Beta-prop_IFT140_1st
Beta-prop_SPT8
Tricorn_2nd
Beta-prop_DCAF12
ASA1
KASH_CCD
CLIP1
NET2A
HALZ
CC_Bre1
HEF_HK
Motif
Other DBs
NCBI-GeneID:
132980990
NCBI-ProteinID:
XP_060903395
LinkDB
All DBs
Position
9:31184545..31213870
Genome browser
AA seq
605 aa
AA seq
DB search
MAEWRGECTWKRHVSEQLKLRDRVQRQSFEELIHQYNRLLERSDLQAVLSERYQADKYEV
QRGHETSSGAESSRSDALQQEMAQMRIRHQEELTELHKKRGELAQSVIELNNQIQQKDKE
IQSNEAKMLEYQQQISGLQGDCRELRSSLQDLERANQTLKDEYDALQITFSALEEKLRKT
TEDNQELVSRWMAEKAQEANKLNAENEKDTRRRQAKLQKELADAAKEPLPVDPDDDIEVL
AEDGGKGGGETSPNRAVSRTPSKMSSQPPPGGLRISISNIFGRRPAGSFSSSPENTEAPS
GVCADVRVPSTALHVFDAHDGEVNAVRFSPGSRLLATGGMDRRVKLWEVVAGRCEPKGAL
TGSNAGITSIDFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLAARFLLDNAR
IVSGSYDRTLKLWDLRSKVCMKTVFAGSSCNDIVCTEQCVMSAHFDKKVRFWDIRSESIV
RELELQGRVTSLDLNHDRSELLTCSRDDLLKIIDLRTNAVRQTFSAQGFKCGADWTRVTY
SPDGAYVVGGSADGALYVWNVLTGKVERTLDRNHNSAINAVSWSPSGSFVVSVEKGSKAI
LWSDM
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtggcggggggagtgcacgtggaagagacacgtctcagaacagctgaagctc
agagaccgagtgcagagacaatcctttgaagaactcatccaccagtataaccgtctgctg
gagaggtcggacctgcaggccgttctgtcagagaggtaccaggccgacaagtatgaggtg
cagagaggacacgagaccagctcgggggcggagtcaagtcgcagtgacgccctgcagcag
gagatggctcagatgagaatcagacaccaggaggagctgactgagctgcacaagaaacga
ggagagctcgcccagagtgtgattgaactgaacaaccagattcaacagaaagacaaagag
atccagagcaacgaggccaagatgttggagtaccagcagcagatcagcggtcttcagggt
gactgtcgggagctcaggagcagcctgcaggacctggagagagccaatcagacgctgaag
gatgagtatgacgctctgcagatcaccttctcagccctagaggagaaacttagaaaaacc
acagaggacaaccaggagctagtgtctcgctggatggctgagaaggcacaggaggccaac
aagctgaacgcagagaacgagaaggacaccaggcgcagacaggcgaagctgcagaaggag
ttggcggatgccgccaaagagccgctgcccgtggaccctgacgatgacatcgaggttttg
gctgaggatggagggaaggggggtggagagacttcacctaacagagcagtcagcaggacc
cccagtaagatgagctctcagcctcctcctggtggtctgcgcatctccatctccaacata
tttggacgtcgccctgccggctcgttcagctcatcacctgagaacactgaggctccttca
ggtgtgtgtgccgacgtccgggtcccttccactgccctgcacgtgtttgatgcccatgac
ggtgaagttaatgctgtaaggttcagtccaggctcccgtctcctagcaacaggagggatg
gaccgcagagtgaaactgtgggaggtggtggcagggcgttgtgagcctaaaggtgctctg
acgggcagtaacgcaggtatcaccagcatcgactttgacagcgctgggtcatacctgctg
gcggcctctaacgactttgcgagtcggatctggaccgttgacgactacagactgaggcac
acactgacaggtcacagtgggaaggtgttggcagctcgtttcctattggacaacgctcgg
atcgtctctggaagctacgaccgaacgctcaaactctgggacctgcgcagcaaagtctgt
atgaagacggtgtttgcgggctccagctgtaatgacattgtgtgtacagagcagtgtgtg
atgagcgcccactttgataagaaggttcgattctgggacatcagatcggagagtatagtc
cgggagctcgagctacagggcagagtcacatctttagacctaaaccacgaccggagtgag
ctgctgacctgctccagagacgacctgctgaagatcatagacctgcgcaccaacgccgtc
agacagacgttcagtgctcagggtttcaagtgtggagcagactggaccagagtgacctac
agtcctgacggggcctacgtggtcggaggatcagctgatggcgctctgtatgtctggaat
gttctgacggggaaagtggagcggactctggaccgaaaccacaactcagccatcaacgcg
gtgtcctggtctccgtccgggtcgttcgtggtcagcgtggagaaaggaagcaaggccatc
ctgtggtctgacatgtga
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