KEGG   Labrus mixtus (cuckoo wrasse): 132981702
Entry
132981702         CDS       T10666                                 
Symbol
rnf4
Name
(RefSeq) RING finger protein 4
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
lmix  Labrus mixtus (cuckoo wrasse)
Brite
KEGG Orthology (KO) [BR:lmix00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lmix04121]
    132981702 (rnf4)
Enzymes [BR:lmix01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     132981702 (rnf4)
Ubiquitin system [BR:lmix04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    132981702 (rnf4)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4 zf-RING_5 zf-C3HC4_3 zf-RING_4 zf_RING_Vps8 zf-rbx1 Prok-RING_4 RING_XB3-XBAT31 zf-C3HC4_4 Rtf2 zf-UDP zf-RING_11 IBR_1 zf-RING_16 zf-RING_6 zf-RING_10 zf-ANAPC11 DZR
Other DBs
NCBI-GeneID: 132981702
NCBI-ProteinID: XP_060903690
LinkDB
Position
10:6011950..6017775
AA seq 228 aa
MSGSAQRKRRTTGSPLVSRPSIKTSRGASTRRAANANRAANANRAANASRAASRLANIAA
NTTANVSSTSDGDSATPTETIDVMDNTVEGVDDVVDLTCEGSEAAVVDLTHNDSVVLLDE
GPRNRQVTTGGSYVVSSDEDEDTPPVLKGSILSSLQSNSSSRSTPGTISCPVCLDSYSEI
VESGRLVVSTKCGHVFCSQCLRDALTSSHTCPTCRKRLNHRQYHPLYV
NT seq 687 nt   +upstreamnt  +downstreamnt
atgagcggctctgctcagagaaagaggaggaccacgggaagtcctctggtgtccagaccc
agtatcaagaccagcagaggagctagcacgagaagagcggctaacgctaacagagctgct
aacgctaacagagcagctaacgctagcagagcagccagcagattggctaacatagcagct
aacacaacagctaatgtaagcagcacctctgatggtgactctgctaccccgacagagacc
atcgatgtgatggacaacacggtagaaggtgtggacgacgtggtggatctcacctgtgag
ggctcagaggctgctgtggtggacctgacccacaacgactcagtagtgctgctggatgaa
ggtcctcggaacagacaagtcaccacaggcgggagttatgttgtcagcagtgacgaagac
gaggacacgccccctgtcctcaaaggctcaatcctgtcctctttacagtccaacagctcg
tccagatcgactccggggacaatcagctgtccagtctgtttggactcgtactctgagatc
gtagagagcggccgattggtcgtttccactaaatgtggtcatgtgttctgcagccagtgt
ctgagagacgccctgacatcatcacacacctgtcctacctgtaggaagagacttaaccac
cgtcagtaccaccccctctatgtctag

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