Labrus mixtus (cuckoo wrasse): 132981746
Help
Entry
132981746 CDS
T10666
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RNF12-A
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmix04121
]
132981746 (rlim)
Enzymes [BR:
lmix01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132981746 (rlim)
Ubiquitin system [BR:
lmix04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132981746 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
132981746
NCBI-ProteinID:
XP_060903777
LinkDB
All DBs
Position
10:complement(6950897..6957101)
Genome browser
AA seq
662 aa
AA seq
DB search
MEGSDSLDQSGSDQPESQRTSQQDRLSREEAFYQFVNNLSDEDYRLMRDNNLLGTPGEAT
EDELLSRLQQLKDGPEQQNNTPTPENGEDPVEPPENSEDPASGDSLLDWLNTVRRTGNTT
RTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQESPEESQEESPEVP
QEESPEVSLEETPEVQEVVANAEPQVVPMETEVVEEPVVEELAVVVEPEPELEEIVSQEV
LADPPSSPAAASLPEQPPLSPSPRRGQRRPRSRSPEPRRTRARTARSRSPLNLDQMDGLP
NPRNTQSSQGQDTLPINLPVPQVEGSSRTRQHVPARQSTVDSDVQPSRASPETVLETQNV
TSQEGDAAGGEGGVAGRRPPTIMLDLQVRRVRPGEYRQRDSIASRTRSRSQNSNNTFLYE
SERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLGEATSMALQSMIRQIMTGFGELG
YLMDSDSDSSDSNRGVNTPADLAEAVNNPEVAPAADVDEPPVAAGVRARTAEPDVDESLA
TGPPASSGRARPRPPISLEEPSSLPFLRLAHFFLLNDDDEDQPQGLTKEQIDNLSMRNFG
ESDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRES
VV
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggaggggtctgacagtttagatcagagtggcagtgaccaaccagagtcgcagcgcaca
agtcagcaggaccgcctgagcagggaagaggctttctatcagtttgtcaacaatctcagt
gatgaagactatcgactcatgagagacaacaatctgttgggcactccaggagaagcaaca
gaagatgagctgttaagtagacttcagcaactcaaagatggtcctgagcagcagaacaac
acccccacccctgaaaatggagaagatccagttgaaccaccagagaactctgaggatcct
gccagtggggatagcctcttggactggctgaacaccgtaaggcgcaccggcaacacaaca
agaactggacatcgtggaaaccaatcatggcgggccgtaagccaaacaaacccaaacagt
ggcgatttccgcttcagcctggagataagtgtcaaccgcaacctggctgaacagcaggca
gccgctgagggggagcaggagtctcctgaggagtctcaagaagagtctccagaggtccct
caagaggaatctccagaggtgtccctggaggagacaccagaggtccaagaagttgtggca
aacgctgaaccccaagtcgtccccatggagacagaagtggtggaagaaccagttgttgag
gagttggctgttgtagtagaaccagagcctgaactagaagagattgtttcacaagaggtt
ttagcagatcctcccagctcacccgctgcagcttccttgccagaacaaccgccactttcc
ccttctccacgcagaggacaaaggagaccccgcagccgcagtccagagccacgcaggact
agggcccgtacagcaaggagccgctcccctcttaacttggatcagatggatggtctccct
aatcctcgtaatactcaaagctctcaaggccaggacaccttacccattaacctccctgtc
cctcaagtggagggcagttctcggactcgacaacatgtgcccgccaggcaaagcactgta
gatagtgatgttcagccatctagggctagcccagaaactgtcttggagacacaaaatgtc
acatctcaggaaggagacgccgctgggggggaagggggtgtggctgggcgtcgtccccct
actattatgcttgacctccaggtgcgtcgtgtgcgtccaggcgagtatcgccagagagac
agcattgccagtcgtacccgctcacgttcccagaactctaacaacacatttctttatgaa
agtgagcgtggtggatttcgtaggactttctcccgctctgagcgtgctggtgtgcggacc
tatgtcagcacaattcgcatccctatcagaagaatctctgatgcaggtttgggagaggca
acctcaatggctctccagtctatgattcgacagattatgactggttttggtgaactcggc
tacctcatggattcagactctgattcttcagattcaaatcgaggagtaaacacacctgct
gatctggctgaagctgtcaataacccagaagttgctcctgctgctgatgttgatgaaccc
cctgtggctgctggagtcagagcaaggacagctgagccagatgtggatgagagtcttgcc
accggtccacctgcctctagtggcagagctcgaccaagaccacctattagcctagaagag
cccagctcattaccattcctgcgactcgcccacttcttcctcttaaatgatgatgatgag
gaccagccccaagggctgaccaaagagcagattgacaacctctccatgcgcaattttggt
gagagtgatgccttgaagacttgcagtgtctgcataacagagtatgcagaaggtaacaag
ctacgcaagcttccctgctctcatgagtaccatgtgcactgcattgatcgttggctgtca
gaaaactccacttgcccaatctgccgcagggccgtcctagtttcagccaaccgagagagc
gtggtgtag
DBGET
integrated database retrieval system
