Labrus mixtus (cuckoo wrasse): 132981844
Help
Entry
132981844 CDS
T10666
Symbol
rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmix04121
]
132981844 (rnf20)
Enzymes [BR:
lmix01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132981844 (rnf20)
Ubiquitin system [BR:
lmix04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
132981844 (rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
zf-C3HC4
zf-C3HC4_3
CC_Bre1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
BRE1
zf-RING_2
zf-rbx1
SOGA
Motif
Other DBs
NCBI-GeneID:
132981844
NCBI-ProteinID:
XP_060903920
LinkDB
All DBs
Position
10:8560368..8569594
Genome browser
AA seq
1030 aa
AA seq
DB search
MSGQKRPADPGSASSSSSGAPPEKRREREGEDGGPGVSAAAGGSTAVTETVIKLGGVSNS
EEQDIKALQAKNRKLGESLDLRQVIEDELRERIERLETRQATDDASLLILNRYWNQFDEN
VKLTIRRYDQSTSEPEKPLASEGRSLKPETPEPDGDSNQERAKDRGHPGETTNSFLATLA
SSSSEEMEAELQERVESSQKQANHVVEIYECLRSTVDKLKTELDSGADEMKQRAGLKGSL
WQVASNLNSLLTRENKRLQQQTEDLKQKYSQMTSETRPLGRAANKADQRVGELQVLIDEL
QWDMEKIRRRENRLNAHLSEILERVNSKGYKVCGEASSVCGTITINKRKFEEMNSEMDES
RELADNRLIELQKLQQDLQNVQQENNSMKAELMSRAESMVKETSEYRCLQSQFSVLYNES
LILKAQLDETRARLNTTRTARLRQLEHMENDEVALQRKVRTEVFQLEDTLAQVRKEYEML
RIEFEQTLAANEQAGPINREMRHLISTLQTHNQQMKGEVVKYKIRLRETQAELNQVRASK
GNAILQSQSSTELDVKDETTSPSNTAISGEPAIKTEPDNGSSTPSSTGASVKTEPGVEPE
ATVKEDEKEEKKEKEEKKEKDVLKKEEKEREKEKERPTRGGGGVIKEEKEKPGSSSQPEE
LAGERLSVVGGSKRKEIEQLKIVRAELKKAQESQREMKLLLDMYRSAPKEQRDKVQLMAA
EKKSKSEGEELRQRLRELEERERREGKKMADEEALRKIRSVEEQIDILNKKLSIAKQEED
ALLSEMDVTGQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELAD
QLLTLKTQVDAQLQVVRKLEEKERLLQGTISTAERELALRTQALDMNKRKAQDSASLSEE
VRTQLEQVQQRLKLVREEVVENSISREKESFNARRAQEDISKLRRKIEKAKKPAEKISNG
DDILNEEINDYKARLTCPCCNSRVKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFG
ANDFHRIYIG
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggacagaagcgtcctgctgaccccggcagtgcctcctcctcgtcgtccggtgct
ccgcctgagaagcggagggagcgggagggagaggatggaggtcccggggtcagcgcggct
gctggggggagcaccgcagtgacagagacggtcatcaaactcggaggagtgtccaactca
gaggagcaagacatcaaagccctccaggcaaagaatcgaaagttgggagaatcccttgat
ctaagacaggtgattgaggacgaattgcgagagcgaattgagagactggagacgcgccag
gctactgatgatgccagtctgctgatcctcaatagatactggaaccagtttgatgaaaac
gtcaaactaacaatcaggcgttatgaccaatcaaccagtgagcctgagaagcctctggca
agcgaggggcggagcttgaagccagaaaccccagaaccggatggcgactccaaccaggag
agggcaaaggacagaggccacccgggagagacgaccaactccttcttagccacactggca
agtagcagcagcgaagagatggaggccgagcttcaagagagggtggagtccagccagaag
caggccaatcatgtggtggagatctatgaatgtctgaggagcacagtggataaactgaag
acagagctggactctggagctgatgagatgaaacagagagcaggtttgaagggcagcctg
tggcaggtagcttccaatctgaactccctcttgacccgggagaacaagcggctgcagcag
cagacagaggacctcaagcaaaagtacagtcaaatgacaagcgagacccggcctttgggt
cgtgcagctaacaaagcagaccagcgcgtcggagagctgcaggttttgatcgatgagctc
cagtgggacatggagaagatccgccgcagagagaacagactgaatgcacacctgagcgag
atcctggaaagggtgaatagtaaaggctacaaagtgtgtggagaggcaagcagcgtctgt
ggaaccatcactataaacaagagaaagtttgaggaaatgaacagtgagatggacgagagc
agggagctggcagataaccgcctcatcgagctgcagaagctccagcaggacctgcagaat
gtgcaacaggagaacaacagcatgaaggcggagctgatgagtcgagcagagagcatggta
aaagagacttcagagtaccgctgcctgcagtcgcagttttctgttctctataacgagtct
ctgatccttaaggctcagttagatgagacgcgtgctcgtctcaacactaccagaactgca
aggcttcggcagctcgagcacatggagaatgatgaggtggctctgcagaggaaggttcgt
acagaggtgtttcagctggaggacactctggctcaggtcaggaaggagtacgagatgctg
cgcattgagtttgaacagactcttgctgccaatgagcaagcaggtcccatcaacagagag
atgcgccacttgatcagcacgctgcaaacacacaaccagcagatgaaaggagaggtggtg
aaatacaagattaggctgagagaaactcaagctgagctcaatcaagtccgcgcttcaaag
ggaaacgccatcctccaatctcagtcgagcacagagctggacgtgaaggatgagacgacc
tcgccttcaaacacagccatttccggggaacctgcgatcaagacagagcctgacaacggc
tcctcaacacccagcagcacaggggcctcagtgaaaacagagcccggagtagaaccagaa
gcaaccgtaaaagaggacgagaaagaggagaaaaaagagaaggaggaaaagaaagaaaag
gatgttctgaagaaggaggagaaagagcgggagaaggaaaaggagaggccgacacgcggc
ggtggcggtgtgataaaggaggagaaagagaagccagggagtagcagccaacccgaggag
ttggccggggagcgcctgtcagtggttggaggatcaaagaggaaggagatcgagcagctg
aagattgtcagagcagaactcaagaaagcccaggagtctcagagggagatgaagctgctg
ctggacatgtaccgctcagcaccgaaggagcagagggacaaagtgcagctcatggctgca
gagaagaagtccaagtcagagggagaggagctacggcagaggctgagggagctggaggag
agagaaaggagagagggcaagaaaatggcagatgaagaggcactgaggaagatccgctct
gtggaggagcagattgatattctcaataagaagctttcaatagcaaaacaggaggaggac
gcgctcctgagcgagatggacgtgacgggccaggccttcgaggacatgcaggaacagaac
attcgactgatgcagcagctccgggaaaaagacgatgcaaatttcaagttgatgagcgag
cggatcaagtccaaccagatccacaagctcctgaaagaggagaaggaggagctggcagac
cagctgctcactctaaaaactcaggtcgatgcccagcttcaggtggtgcggaagctggag
gaaaaagagcgcctcctgcagggcaccatcagcaccgcagagagagagttggcactgcga
acacaagccttagacatgaacaaacgcaaggcacaggactctgcgtcgctgtcagaggag
gtgcgaactcagctggagcaggttcaacagaggctcaagctggtcagagaggaggtggta
gagaacagcatctccagagagaaagagtcatttaacgcccgaagagcacaggaggacatc
tccaaactcaggagaaagatcgaaaaggccaagaaaccggctgagaaaatcagcaacgga
gacgacatcctaaatgaagaaatcaacgattataaggcacgtcttacatgcccatgctgc
aactctcgggtaaaggacgctgttctgacaaagtgcttccacgtcttctgcttcgagtgc
gtcaagacacgctacgacacacgccagagaaagtgcccaaagtgcaacgccgccttcgga
gcgaacgacttccaccgcatttacatcggctaa
DBGET
integrated database retrieval system
