Labrus mixtus (cuckoo wrasse): 132981872
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Entry
132981872 CDS
T10666
Symbol
pcdh11
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
132981872 (pcdh11)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lmix01009
]
132981872 (pcdh11)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lmix04515
]
132981872 (pcdh11)
Protein phosphatases and associated proteins [BR:
lmix01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132981872 (pcdh11)
Cell adhesion molecules [BR:
lmix04515
]
Cadherins
Protocadherins
132981872 (pcdh11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
TMEM154
DUF6249
Motif
Other DBs
NCBI-GeneID:
132981872
NCBI-ProteinID:
XP_060903963
LinkDB
All DBs
Position
10:9319203..9445995
Genome browser
AA seq
1267 aa
AA seq
DB search
MDLAGQAHVLVVLLASVVLLCLAQERDYTVKEEQPENVRIGNLRRDLDLSLDPNIRLSSP
LQFKPVYKTGDVPLVRVEASTGEIFTTNHRIDREKLCSGVFAEKRCYYEIEVAVLPDEIF
RLVKIRFLIEDVNDNAPLFQSTVINISIPENTAINTRYPVPSAFDPDVGINGIQHYELVK
SVSEFGLDIIETPEGDKWPQLIVQQNLDREQKDTFVMKIKVEDGGNPPKSSTAILQVTIS
DVNDNRPIFKDSELEVTVPENAPMGTSVAQLHATDADLGSNAQIHFAFSNQISASTKRHF
AIDSSTGLITVKQPLDREVTPVHKLIVLASDGSSTPSRATVIVNVTDVNDNVPTIDTRYI
INLVNGTVLLSENAPLNTKIALITVTDKDADLYGKVACYTDHDVPFRLKPVFNDQFLLET
AAPLDYETTREYAIKIVASDRGTPPLNTSAMVLIKIKDENDNAPIFPQPEIQLSIPENND
PSTQLIKISATDADSGHNAEIIYTLGPDAPDGFNVDRRSGILSVGKRLDREKQERYSFTV
IAKDNGSTSLQSNVTVRLIVQDLNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAG
DNAVITLSILNGKDNFIIDPQTGVIKPNITFDREQQSSYTFMVKAVDAGQPPSSSYAKVT
INVVDVNDNRPVFVIPSSNYSYDLVRATTTPGAVVTRVFAIDNDTGMNAELQYSIISSII
ITSRVSPRGLFAIDKITGNITLQEKIVVADQGLHRLVVKVKDLGQPESLHAIALIHLFVN
DTVSNATFIQEQLRKSMETPLDRNIGDSEVSPQANGYVIVVIAIIAGTMTVILVIFVTAL
VRCRQTPRHKVVQKGKQSGEWVSPNQENRQIKKKKKRKKRSPKSLLLNFVTIDESKPDDP
THEHVNGTLDLPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPV
APKKHHVIQELPLDNTFVVGCDSLSKCSSTSSDPYSVSECSCQGGFKTAGQITTRQNLGQ
TPEKSFNSPPPLCPHKEACQLSKITSVNTQRRVTFHLPDGSQESCSDSGLGDPEPSSTAS
NTQPLPLSFHQDEYYEQTSPNSRTEGDGNSDPESTIEVNLQKALAEASETCTQECLILGH
SDSCWMPPALAQFQGSGSNSPSTTPTTAAITATMSSFGFQQSFSRGAKANMGCMGVMDGR
HTLGRSVPKKEDLDKGMNRPQFYNTLDRHSSKKEDPVKVIPLASFSAPGQHTPTGVGSGS
FLHEHQL
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggacttagcaggtcaggctcatgtgctggtggtcttgctcgccagcgtggtcctgctg
tgtctggcccaggagagagactacacggtgaaggaagagcaaccggagaacgtccgcatc
gggaacctgcgcagggacctggacctcagcctagaccctaacatcaggctgtcctctccg
ttgcagttcaagcctgtgtacaagacaggtgacgtgcctttagtgagggtggaggccagc
acgggggagatctttacaaccaatcaccgaatcgaccgggagaagctgtgctcaggggtc
ttcgctgagaaacgctgctactatgagatagaggtggccgtgctgcccgatgagatcttc
agattggtcaagatccgcttcctgatcgaggatgtaaatgacaacgcaccacttttccag
tcaactgttataaacatctccatcccagagaacacagccatcaacactcgataccctgtg
ccctcagcatttgaccctgatgtagggatcaatgggatccaacattacgagctggtcaag
agtgtcagcgagtttggcttagacatcattgagactcctgaaggggacaagtggccacag
cttattgttcagcagaaccttgaccgcgagcagaaggacaccttcgtaatgaagataaag
gtggaggacggtggcaaccctcccaagtccagcactgccattctccaagtcaccatttct
gatgtcaatgacaatcgtcccatcttcaaggacagtgagctggaggtcacagtaccagag
aatgcccccatggggacatcagttgctcagctccatgccacggatgcagacctgggctcc
aacgcacagatccactttgccttcagcaaccagatctctgcctcaaccaagcgtcacttt
gccatcgatagctctacaggactcatcacagtgaagcagcctcttgaccgggaggtaact
cctgttcacaaactcattgtcctggccagtgatggcagctccactccttccagagccaca
gtgattgttaatgtaacagatgttaatgacaatgttcctaccatagacactcgctacatt
atcaacctggttaatgggactgttcttctgtctgagaatgcacctctaaacaccaaaata
gccctaattactgttactgacaaggatgcagatctttatggtaaagtagcttgctacact
gaccatgatgttcctttccggctgaagcctgtctttaatgatcaattcctactagagacg
gctgcccccctagattatgagacgactcgagaatatgcaattaagatagtggcctcggat
agagggacgcctcctttgaacacttcagctatggttttaattaaaatcaaggatgagaac
gacaatgcacccatcttcccccagccggaaatccaactttccataccggagaacaatgat
ccttctacacagttaataaaaatcagtgccactgacgcagacagcggacataatgctgag
attatttatactcttggccctgatgcgcctgatggttttaacgtagacaggcggtcagga
atcctttctgttggcaaacgactggacagagagaagcaggagaggtactcattcactgtc
atagcgaaggacaatggctccacatccctgcagagcaatgtcactgtcaggctaatcgtc
caggaccttaatgacaacagcccagctttcacacacccagagtacaacttctatgtgcct
gagaacctgcccctctacggaaccgtgggcttaatcacagtgactgatgcagatgcggga
gataatgctgttataaccctgtccattttgaatggcaaagacaatttcatcatcgacccc
caaactggtgtgataaaacccaatatcacctttgacagggagcagcagagctcttacaca
tttatggtcaaggcagttgatgcagggcaacctccaagctcctcttacgccaaggtcact
atcaatgtagtcgatgtgaatgacaatcgcccagtttttgtcatcccatcatccaattac
tcatatgacctagtacgggccaccaccacacctggcgctgtggtcaccagagtgtttgcc
attgacaatgacacaggtatgaatgctgagctgcagtacagtattatcagtagcatcatc
atcacatctagggtctctcctcgaggtctcttcgccattgacaaaataacgggtaacatt
acactgcaggagaaaatagtagtagctgaccaggggctgcataggctggtggtcaaggtc
aaagatctaggccagcctgagtcattacatgccatagcccttattcacttgtttgtcaat
gacactgtgtcaaatgccacctttatccaagagcagctacgaaaaagcatggagacacct
ttggaccgtaacataggggacagtgaggtatcacctcaggccaatggatatgtgattgtt
gtcatagctatcatagcagggaccatgactgtcatcttggtgatttttgtgactgccttg
gtgcggtgccgacagacgcccagacacaaagttgtacagaagggcaaacagagtggagaa
tgggtttcacctaaccaagagaaccgtcagatcaaaaagaagaagaagagaaagaagcga
tccccaaaaagcctcctcctgaactttgtgaccatagatgaatccaagcctgacgaccct
acccatgagcatgtaaatggtacactcgatctccccgtggagttagaggagcaaaccatg
gggaagtacaactgggccaccacgcctaccaccttcaaacccgacagcccagatttagcc
aagcattacaagtcagcttcccctcagcctacatttcaaatcaaaccggagaccccagtg
gccccaaagaaacaccacgtgatccaggagctccctttggacaacacatttgtggtgggc
tgtgactcactctccaagtgctcatcgactagttccgacccatacagtgtctcagagtgc
agctgtcaggggggattcaagactgcggggcaaatcaccacccgacagaacctgggccag
acaccagagaagtcttttaactcaccgcccccactttgtcctcataaggaggcctgtcaa
cttagcaagataacctctgtgaatacccagcgtcgtgtgaccttccatcttcccgacggt
tcccaggagagctgcagtgacagcgggcttggagatcccgagcccagcagcacggccagc
aacactcagcctctccccctcagcttccaccaggacgagtactacgagcaaacatcaccc
aacagccgcacggagggagatggaaactcagacccagaatctaccatagaggtgaacctg
cagaaagctttggcagaggcctctgagacctgcacccaggagtgtctgatactgggccac
tccgacagctgctggatgcccccagccctggcccagttccaagggtctggtagcaacagc
cccagcaccaccccgaccaccgccgccatcacagctacaatgtcctcttttggcttccag
cagagcttttccaggggggccaaagctaacatgggctgcatgggggtcatggatggtcgc
catacgctgggcaggtctgtgcccaaaaaagaagacctggacaaagggatgaaccggccg
cagttctacaacaccctggatagacactccagtaagaaggaggaccccgtcaaggtcatc
cccctggcgagcttctctgcccccgggcagcacacgcctactggagtaggcagcgggtct
ttcttacatgagcaccagctgtaa
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