Labrus mixtus (cuckoo wrasse): 132981939
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Entry
132981939 CDS
T10666
Name
(RefSeq) nuclear receptor ROR-alpha A-like isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
lmix Labrus mixtus (cuckoo wrasse)
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmix03000
]
132981939
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lmix03310
]
132981939
Transcription factors [BR:
lmix03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
132981939
Nuclear receptors [BR:
lmix03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
132981939
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
132981939
NCBI-ProteinID:
XP_060904115
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Position
1:complement(7294127..7384621)
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AA seq
543 aa
AA seq
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MESSPQDSASDPGRSGSEPATPVTETPANVETLPGGKHLTPARRSSGSGSGSGKGSSAAV
KKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCLIDRT
SRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQQQQQQGSLLLS
HPSLGTPSPGEAEPLSPHYSLSSGGLTELPDDLGGYIEQNSPEGGSVSSKADSGGGGGGG
FYLDFQPSPDQSGLDINGIKPEPLCDYGSSNGFFPYCSFSNGDASPTVSMAELDHLAQIT
SKSHLETCQYLREELQQMSWQNFPQDEVDSYQSKPQELMWQLCAVKITEAIQYVVEFAKR
IDGFMDLCQNDQIVLLKAGSLEVVFVRMCRMFDSQNNAVYFDGKFAGPDVFKALGCDDLI
SSVFDFAKSMCSLHLSEDELALFSAFVLLSADRSWLQEKLQVEKLQQKTQLALQHVLQKN
QREDGLIIKLRCKVSALRSLCSRHTEKLSAFRAIYPDVVGTHFPPLYKELFGGDLEVTLQ
TDD
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgtccccgcaggattcggcgagcgacccgggcaggagcggctctgagcccgcc
acgccggtcacagagacgccggcgaacgtggagacactgccgggcggaaagcacctgacc
ccggcgaggagaagcagcggctccggctccggctccggcaaaggttcgtcagctgctgta
aagaagactcacacatctcagattgaaatcattccctgtaagatctgtggagataaatcc
tcggggatccactacggggtgatcacctgtgagggctgcaagggtttcttcaggcggagt
cagcagagtaacgccgcctactcgtgtccccgccagaaaaactgtctgatcgaccgaacg
agccgcaaccgctgccaacactgccgtctgcagaaatgtctggctgtgggcatgtcccga
gacgctgtaaagtttggtcgcatgtcgaagaagcagcgggacagtttgtacgctgaggtg
cagaaacatcgcctccagcagcagcagcagcagcagcagcagggttccctcctcctgtcc
caccccagcctgggcaccccgagcccgggcgaggccgagccgctgtcccctcactacagc
ctctcctccggcggcctcacagagctgccggacgatctgggaggctacatcgaacagaac
tcacctgaaggaggatcggtgtcttccaaggcagattctggaggaggaggaggaggcggg
ttctacctggacttccagccctccccggaccagtcaggactcgatataaacggcatcaaa
ccggagcctctgtgtgactacggatccagtaacggcttcttcccgtactgctccttcagc
aacggggacgcgtcccccaccgtgtctatggctgaactcgatcacctggctcagatcacc
tccaagtctcacctggagacgtgtcagtacctgagggaggagctgcagcagatgagctgg
cagaacttcccgcaggatgaagtggacagctaccagagcaagccgcaggagttgatgtgg
cagctctgtgcggtaaagatcacagaggccatacagtacgtggtggagtttgccaaacgg
atcgacggcttcatggatctctgtcagaatgaccagatagtgctgctgaaagctggctcc
ctggaggtcgtctttgtccgaatgtgtcgcatgtttgactctcagaacaacgccgtctac
ttcgacgggaaatttgcgggtcctgacgtctttaaagctttaggttgtgatgacttgatc
tcgtcagtgttcgacttcgctaaaagcatgtgttcgctgcatctgtcggaggacgagctc
gctctgttctctgcgttcgttctgctctctgcagaccggtcgtggctgcaggagaagctg
caggtggagaagctgcagcagaagactcagctggctctgcaacacgtcctgcagaagaac
cagagagaggacggactgatcatcaagctcaggtgtaaggtgtcagcgttgcgttcgctg
tgcagtcgacacacagagaagctgtctgcgttcagagccatctaccctgacgtcgtcggc
acgcacttccctcctctttataaggagctgtttggaggcgacctcgaggtgactctgcag
accgacgactga
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