Labrus mixtus (cuckoo wrasse): 132982226
Help
Entry
132982226 CDS
T10666
Symbol
pcdh1b
Name
(RefSeq) protocadherin-1 isoform X1
KO
K16498
protocadherin delta 1
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
132982226 (pcdh1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lmix01009
]
132982226 (pcdh1b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lmix04515
]
132982226 (pcdh1b)
Protein phosphatases and associated proteins [BR:
lmix01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132982226 (pcdh1b)
Cell adhesion molecules [BR:
lmix04515
]
Cadherins
Protocadherins
132982226 (pcdh1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
PDGLE
Motif
Other DBs
NCBI-GeneID:
132982226
NCBI-ProteinID:
XP_060904569
LinkDB
All DBs
Position
10:18323801..18525859
Genome browser
AA seq
1210 aa
AA seq
DB search
MAVLRWKVLLFLAITFIVSCVGAPTDILYRVPEEQPPNTLIGSLAADQGLPDTGHLYKLE
VGSPHLRVDGKTGDIYTTEVSIDRETLKDCRNLFEGDKCFLEFEVSITDMVKGLGSGPRL
IEGRIEVMDINDNTPQFASPILTLSIPENTHIGALFSIPMASDRDSGSNGVAEYSLSTGS
DADQLFSLQVAVDSDEKLPQLVVMGNLDREKKDSYDLNIRVVDGGRPARASSALLRVTVT
DQNDNAPKFERSHYEAELPENSPLGHSVLQVRANDADTGTNGEIDYSLHQASETVQRLLR
IDRSTGIIYVKGLVDREEENFLKFFVVAKDRGPNSKTSKVLVTIVVRDQNDNAPAIEIRG
IGLVTHQDGVANISEDMPIGTPVALVQVSDRDEGENAVVTCVVAGDVPFQLRPASESAND
RKRKYFLQTTTLLDYERIKDYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNSPSFSPALL
EVDFFEGNQPGDKVLDVIATDADSGTNAELVYNIIEHSANFEIDTHSGAVRVKNLLDREE
TERYEFRVAAADKGVPSKTGTATIVINVLDRNDNDPKFMLSGYSFSVIENMAPLNPVGVV
TVTDEDKGENARVNLFVEPDNGKFVIQNGTGTILSHISFDREKESTYTFRLRAVDSGDPP
RSSYVGVTINVLDENDNAPYVTKPANSSYTYMSPITPTETRVEVVEAEDIDSGLNAELVY
TITGGNPYGLFHISPSSGEITLAQEFTGKHNGLHRLVVRVSDKGKPPRHTTALVHVFVND
TKSNVSLIEALVGHSLYTPLDRDIAGDPNYALAQRSNILYGSLAGIAGVIMVIVAVVVIR
HRLQKDTKSGYQAGKKESKDLYAPKQGPKNGKGKKSKKGKAPKPAKPLEEDEEASLQKGL
KFNLINDTVNDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQAVQDL
PATNTFVGTGDNNSTGSDQYSDYSYKANPPKYSSKQHPHRRVTFSTANQAQDLQDASQHS
YYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMT
GNCTRECTEYGHSDSCWMPGQTSPNRKVSMNAPALSTFVPYQEMDGQEQLMANGSPKPMM
MEERGTGGGGGSSSKVANMRFMTPYSSAYPGGGDSTGKDCGLEEIPLSQAVEYHSATTPT
GQTSKREIYL
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgctgaggtggaaggtcctgctgttcctggcgatcaccttcattgtttcttgc
gtcggtgcgcccactgacatcctgtatcgggttcctgaggagcagcctcccaacacactg
atcgggagcctggcggcagaccaaggcctgcccgacaccggccacctctacaagctggag
gtgggctcgccgcacctgagagtggacggaaagaccggtgacatctacaccacagaggtc
tccatcgaccgcgagacgctaaaggactgccgaaacttgtttgaaggcgacaaatgcttc
ctggagtttgaggtgtcgatcacagatatggtaaaaggtctcggttcagggccgcggctg
attgagggacgcatcgaggtgatggacatcaacgacaacacgccacaatttgcctccccc
atcctcaccctttccatccctgagaacacgcacatcggcgccctcttctccattcccatg
gcctctgacagggactctggctccaatggcgtggcagagtactcgctgagcaccgggtcg
gacgcagaccagctcttcagcctgcaggtcgccgtggactcagacgagaagctgcctcag
ttggttgtcatggggaacttggaccgagagaagaaggactcgtatgacctgaacatccgg
gtggttgacggagggaggccggcgagggcgagcagcgcactgttgcgggtcaccgtgact
gaccagaatgacaacgcaccgaagtttgagaggagtcactacgaggctgaactgccggag
aacagcccgctaggacactctgtgcttcaggtcagagcaaatgatgcagacactggaact
aacggagagatagactacagcctccatcaggcctcagagaccgtccagaggcttctacgc
attgaccgctcaaccggcatcatctatgtcaagggtctagtggatcgcgaggaggagaac
ttcctcaagttctttgtggttgccaaagatcgtgggccaaactcaaagacctcaaaagtc
ctggtgaccattgttgtgagggaccagaatgacaacgcaccagccatcgaaatccgtgga
attggcttggtaacacatcaggatggcgtggccaacatctctgaggacatgcccataggc
actcctgtggcgttggtccaggtttctgatcgtgatgagggtgaaaatgcggtggtgaca
tgtgtggttgctggtgatgtcccatttcagctccggcctgcaagcgagtcagctaatgat
cgcaagaggaaatacttcctgcagacaactaccctgctggattatgagcgtattaaggat
tacaggattgagattgttgctgtggattctgggaacccagccctgtccagcacgaactcc
cttaaagtccaggtcacagatatgaacgataattcaccaagcttttcccctgcgctgctt
gaggtggacttttttgagggcaaccagcctggcgacaaggtcctggatgtcattgctaca
gatgcagacagtggcacaaatgcagagctagtgtataacatcattgagcactcggccaac
tttgaaattgatacccacagtggagcagtgcgtgtgaagaacctgctagatagggaagag
acggagcggtatgagtttcgcgtggcggcagcagacaagggcgtcccaagcaaaactggc
actgctacaattgtgataaatgttctggaccgcaatgacaatgaccccaagtttatgctt
agtggctacagcttctctgtaattgaaaacatggcgcctctcaatcctgttggggtagtg
actgtcactgatgaagataagggggagaatgcccgagtgaatctgtttgtggaaccagac
aatggcaagtttgttatccagaatggcacaggaacgatcctgtcccacatatcctttgac
cgtgaaaaggaaagcacttacaccttccgcctgagggctgttgattctggtgacccacct
cggtcctcatatgtgggtgtgaccatcaatgtccttgacgagaacgacaatgccccctat
gtcaccaaaccagcaaactcctcttacacatacatgtcacctatcaccccaacggagact
cgtgtggaggtggtggaggctgaggacattgactctggactaaatgctgagctggtctac
accatcacaggtggcaacccatatgggctgttccatatctcaccgagcagtggggaaata
actctggcacaggagttcactgggaaacacaacggcctgcaccgccttgtggtgagagtc
agcgataaaggcaaacctccccgtcacaccacggccctggtccatgtttttgtcaatgac
accaagtccaatgtctccctcattgaggcactggtcggacacagcctctacactcctttg
gacagggacattgctggagacccaaactatgcccttgctcagcgcagcaacatcctgtac
ggcagccttgcgggtattgctggtgtgattatggtcattgttgctgtggttgtcattaga
catcgtcttcagaaggacaccaagagcggctaccaggctggcaaaaaggaaagtaaggac
ctgtatgctccaaagcaaggccccaaaaatggtaaagggaaaaagagcaaaaaggggaaa
gctcccaaaccggctaagccactagaggaggacgaggaggccagcttacagaaaggcctc
aagttcaacctcatcaatgacactgtcaacgacagtcccagaatccaccttccccttaac
tacccaccaggaagccctgacttgggccgtcactaccgctctaactcccccctcccctcc
attcaactacagcctcagtcaccctctgcctccaagaagcaccaggctgttcaggacctt
cccgccaccaacacctttgtgggaacgggcgacaacaactcaacaggctccgaccaatat
tcggattacagctacaaggccaaccctccaaaatacagcagcaaacagcacccccaccgt
cgagtgaccttctccacagccaatcaggcgcaggacctgcaggacgcgtcccagcacagc
tactacgacagcggcctggaggagtcagagacgcccagctccaagtcgtcgtcagggcct
cggatcgggcccctggcgctgccggaggaccactacgagcggaccacgcctgacggcagc
atcggcgagatggagcacccggagaacgacctcaggcctcttcccgacgtggcgatgact
ggtaactgcacccgcgagtgcaccgagtatggccactctgactcctgctggatgcccggc
cagacttcccccaaccgcaaggtgtccatgaatgcccccgcgctctccacctttgtgcct
taccaggagatggacgggcaggagcagctgatggccaacggcagcccaaagcccatgatg
atggaggagcgcgggacagggggcggtggaggaagcagttccaaagtggccaacatgcgg
tttatgacgccctacagcagtgcctaccctgggggcggagactcaaccggtaaagactgt
gggctggaggagatcccgctgagccaggcggtggagtatcactcagccaccactccaact
ggccagacctcgaagagggagatctacctgtga
DBGET
integrated database retrieval system
