Labrus mixtus (cuckoo wrasse): 132982243
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Entry
132982243 CDS
T10666
Symbol
nfkb1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04010
MAPK signaling pathway
lmix04210
Apoptosis
lmix04218
Cellular senescence
lmix04620
Toll-like receptor signaling pathway
lmix04621
NOD-like receptor signaling pathway
lmix04622
RIG-I-like receptor signaling pathway
lmix04623
Cytosolic DNA-sensing pathway
lmix04625
C-type lectin receptor signaling pathway
lmix04920
Adipocytokine signaling pathway
lmix05132
Salmonella infection
lmix05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
132982243 (nfkb1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
132982243 (nfkb1)
04218 Cellular senescence
132982243 (nfkb1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
132982243 (nfkb1)
04621 NOD-like receptor signaling pathway
132982243 (nfkb1)
04622 RIG-I-like receptor signaling pathway
132982243 (nfkb1)
04623 Cytosolic DNA-sensing pathway
132982243 (nfkb1)
04625 C-type lectin receptor signaling pathway
132982243 (nfkb1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
132982243 (nfkb1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132982243 (nfkb1)
09171 Infectious disease: bacterial
05132 Salmonella infection
132982243 (nfkb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmix03000
]
132982243 (nfkb1)
Transcription factors [BR:
lmix03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
132982243 (nfkb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
132982243
NCBI-ProteinID:
XP_060904586
LinkDB
All DBs
Position
10:19462862..19495512
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AA seq
940 aa
AA seq
DB search
MAGDDHYLHSSIPIFDNMMDPSWEFTQYPVMSINTSLRTVSMDGPSLQIVEQPKQRGFRF
RYGCEGPSHGGLPGASSEKNRKTYPTVKVSNYQGPARVVVQLVTALTPLTHLHAHSLVGK
QCDKGICVADLQPKDSNISFPNLGILHVTKKNVAKTLEERMIEAYRMGHNCGVSIHPDID
SLQGEVRVPRELNDHQRTAISSAAAVQAKEMDLSVVRLMFTAFLLDSDGGFSRRLEPVVS
EPIYDSKAPNASNLKIVRMDRTAGCVSGGEEVYLLCDKVQKDDIQVRFYEEDDNGPTWEA
LGDFSPTDVHRQFAIVFKTPKYRDQNLQKPTSVFVQLKRKSDNETSEPKPFTYHPQIIDK
EEVQRKRQKTLPNFHDFSGHGGGGGGGGGGGLYRGGGGGGPAAGGGPGSAGGGGYFQGFN
TYNYGGGGAGGGGFSTGYSAGLGGGGGGIKHASRGDTADDNSDDSNPDDDSRSGAALRLS
AQTGGLEVRERTEEGGVSVEPQPDRDERLFEETSRQLQALFQYSVTGDSAYLLAAQRPLM
DTQDEDGDTGLHLAVLHSQQEALKSLTQVVSALPGEEVLNMRNHLYQTPLHLAVITQQRE
AVEALLLAGADPTLTDRHGNTVLHLASQLEDGGVVRFLLQHRELRGLLEHTNTAGLCAIH
LAVLSNQLSSLRELLEGGANAEAQERSCGRTALHLATEAENVSLAGCLLLEGNAKVDCCT
FNGSTPLHIAAGRSSVKLTALLMAAGADPLRENFEPLFFREEDCCEEEMEKEGEDEDEGY
IPGTTPLNMTANTQVLELLNGKEYKPKTLQRDFDPPQGDMSSLDVEVKLEVCRSLESEGC
WENLAHSLGLGILNTAFRLSPSPAKTLLDSYEVSGGTVQDLLAGLRSVGESRSLSILEEA
LGHHDDQEAAGALSVQVQELKVDVRIDSGVCDSGVELSTA
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggctggagacgaccactaccttcattcttcaatcccgattttcgacaatatgatggat
ccatcttgggagtttacacaatatcctgtgatgtctatcaacacgtcactgcgcacagtt
tcaatggatggaccgtccctgcagatcgtggagcagccaaaacagcgtggcttcaggttc
aggtacggctgtgagggtccatctcacggcggtctgcccggagcctccagtgagaagaac
aggaagacctaccccactgtcaaggtcagtaactaccagggtccggcccgggtggtggta
cagctggtgacggcgttgacccccctcacccatcttcatgctcacagtctggtggggaaa
cagtgtgataaagggatctgcgttgctgatttacagcccaaagactcaaacatcagtttt
ccaaatctaggtatacttcatgtgacgaagaagaacgttgcaaagactctggaggagagg
atgatcgaggcctacaggatgggacacaactgtggagtctccatccaccccgatattgat
tccctgcagggggaagtccgagtcccccgagagctcaacgatcaccagcgcaccgcgatc
agctctgcagccgctgttcaggctaaagaaatggacctcagcgtagttcggctcatgttc
acggcgttcctcctcgacagtgacggaggtttctccagacgattggagcccgtcgtttct
gaaccgatctacgacagcaaggctcccaacgcctccaacctgaagattgtgaggatggat
cgaactgccggctgtgtgagcggaggagaggaggtctacttactctgtgacaaagtccag
aaagacgacattcaggtcaggttctatgaagaagacgacaatgggccaacctgggaggct
ctgggagatttctcccccacagatgttcacagacagtttgccatcgtcttcaagactcca
aagtatcgagatcagaatcttcagaagccaacgtctgtgttcgtccagctgaagagaaag
tctgacaacgagaccagcgagcccaaaccctttacctaccacccacagatcatagataag
gaggaggtgcagaggaagaggcagaagacattaccaaacttccatgacttcagtggtcat
ggaggaggagggggagggggaggaggaggaggtctgtaccgaggaggaggaggaggaggt
cctgcagcaggaggaggaccaggctctgcaggaggaggaggttactttcagggcttcaac
acctacaactatggtggaggaggagcaggaggaggaggtttttctacaggatactcagct
gggctgggaggaggaggcggaggcatcaaacatgcctctcggggcgacacagcagacgac
aacagtgacgacagcaacccagacgatgactcgaggtcaggagctgctctgagactttca
gcccagacaggaggcctggaggtgcgggagaggactgaggagggaggggtcagtgtggag
ccacagccggacagagatgagcggttgtttgaagagaccagcagacagctgcaggctctc
tttcagtactcggttacaggagattcagcgtacttgctggctgcacagcgccccctgatg
gacacacaggacgaggatggagacactgggctccatctggcagttctccacagtcagcag
gaggcactgaagagtctgacgcaggtcgtctctgctttgcctggagaggaggtgctcaac
atgaggaaccacctttaccagactcctttgcacctggctgtgatcacccagcagagggag
gcggtggaagcactgctattggccggcgccgacccaactctgacagatcgtcatggcaac
acggttctccacctggcgtcccagctggaggacggaggggtggttcgttttttactccaa
catcgagagctgagaggactgctggaacacaccaacacagcaggtctgtgtgcgatccac
ctggccgttctttccaatcagctctcttctcttagggagctgctagagggcggggctaac
gccgaggctcaggagcgtagttgtggacggaccgccctacaccttgccacggaggctgag
aatgtgtctttggccggctgcctactgctggagggtaacgccaaggtggactgctgcacc
tttaatggctccacccctctacacattgctgctgggcggagctccgtcaagctaacagct
ctcctgatggctgcaggagcagaccctctcagggagaactttgagccgctgttcttcagg
gaggaggactgctgtgaggaggaaatggagaaggagggtgaagatgaagatgaaggctac
atcccaggaaccactccgctcaacatgactgccaacacacaggtgttggagcttctgaac
ggtaaagaatacaaaccgaaaactcttcagagagactttgaccctcctcaaggcgacatg
tcgagtctggacgtggaggtgaagctggaagtgtgtcgctctctagagagtgaaggatgt
tgggagaatctggctcacagtctaggtctcgggatcctgaacacagccttcagactgagt
ccctccccggcaaaaacactgctggacagctacgaggtttcaggtgggacagtacaggac
ctgctggctggtctgaggtcagtcggggagagccgatctctgagcatcctggaggaggcg
ctgggtcaccatgacgaccaggaggcggccggggctctgagcgttcaggttcaggaactg
aaggtggacgttcggatcgacagcggggtttgtgacagtggggtggagctctctacagcg
tga
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