Labrus mixtus (cuckoo wrasse): 132982313
Help
Entry
132982313 CDS
T10666
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04120
Ubiquitin mediated proteolysis
lmix04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132982313 (syvn1)
04120 Ubiquitin mediated proteolysis
132982313 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmix04121
]
132982313 (syvn1)
Enzymes [BR:
lmix01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132982313 (syvn1)
Ubiquitin system [BR:
lmix04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132982313 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
FANCL_C
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
132982313
NCBI-ProteinID:
XP_060904716
LinkDB
All DBs
Position
10:complement(21467596..21481190)
Genome browser
AA seq
627 aa
AA seq
DB search
MVRAALVTATSLALTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWIFHMRVLSLMGLLAIMDFLFVTHACQSIITRGASVQLVFGFEYAI
LLTMVLTTFIKYVLHTVDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNNQTPAQAQAPPPAPAAPANAP
AAPPANVAPGMLPGFPPGMFPFWGPFPAVPPPAAEAAAPGTGDASQDSTEATQAAGSSQP
PSSSADTTAAPGSAMPGFPFSFPPPPFPTAPWLPMPPPPPFVSSMPPPPPSLSRLSEEEL
RELEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLTPPQPEGITGESSRTNHA
ASSPAADSSKDSPRQEKDSQRSEGEDRDTVSFEPTDSTPVDLDIEGTEEIQEGVAVEDGE
PNTAELRRRRLRKLETSSPSSSPPPDN
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggtacgagcagccttggtgacagccaccagtctggctttgactggggctgtggtggca
catgcttacctcctcaaacaccagttctacccaactgtggtctacctaaccaaaagcagc
cccagcatggcggtgttgtacattcaggcctttgttctggtgtttctgttgggaaagttc
atgaggaaagtattctttggacagctaagagctgcagaaatggagcatctcattgagcgc
tcctggtacgcagtgaccgagacgtgccttgcattcactgtattcagggacgacttctcc
cctcgctttgttgccctcttcaccctcctgctcttcctcaagtgctttcattggctggct
gaggaccgggtggactttatggaaaggagtccaaacatatcctggatttttcacatgaga
gttttatctctcatgggattgctggcgatcatggatttcctgtttgtcacccatgcatgt
cagagcatcatcactcggggagcctcagtccagctggtttttggatttgagtatgccatc
ctgctgaccatggtgttgacgaccttcatcaagtacgtgctgcatacagttgacctgcag
agtgaaaacccttgggacaataaggccgtctacatgctgtacactgagctcttcacaggt
ttcatcaaagtgctcctgtacatcgcctttatgaccatcatgataaaggtccataccttc
cccctgtttgcaatccgccctatgtatctggctatgaggcagttcaagaaagctgtaaca
gatgctataatgtctcgaagagccatccgcaacatgaatacattataccctgatgctact
cctgaagacctgcaggcctctgacaacgtctgtatcatctgtcgagaggaaatggtcact
ggagccaagaaactaccttgtaatcacatttttcactccagctgcttgcgttcttggttc
cagaggcaacagacctgccccacctgtcgcatggacgtcctccgtgcatctaataacaac
caaactccagcccaggcccaggccccgccccctgctcctgcagcacctgctaatgctcct
gcagccccacctgcaaatgtcgccccaggcatgttacctggatttccacctggcatgttc
cccttctggggtcccttccctgcagtccctcctcctgctgcagaagctgcagctcctggg
actggtgatgcttcacaagacagtacagaggctacacaggcagctggctccagccagccg
ccctcatcgtctgcagacaccactgctgctccaggatcggcgatgccgggcttccccttt
tccttcccgcctcctccttttcccactgcaccatggttacccatgccaccacctcccccc
tttgtgtcttcaatgccgccgcctcccccgtctctatcccgactctcggaagaggaattg
agggagctggaggcagaaggccgacggggccttgaggccaggctccagtgtctccagaat
attcacaccctactggatgctgccatgctcaacatccaccactacctaagcactgttgca
acgctcactcctcctcagcctgaaggtatcactggagaatccagcaggacaaatcatgcc
gcttcatctcctgcagctgacagtagcaaggacagccctagacaggaaaaagactcccaa
agatctgaaggggaggacagagacactgtttcctttgagccaacagactccactcctgtt
gatttggacatagaaggaacagaagagattcaggaaggagtggcagtagaggatggagaa
cccaataccgctgagctcaggcgtcgccgtctccgcaaattagagacatcttcgccatca
tcctcacccccccctgacaactga
DBGET
integrated database retrieval system
