Labrus mixtus (cuckoo wrasse): 132982639
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Entry
132982639 CDS
T10666
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132982639 (taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmix03021
]
132982639 (taf5l)
03036 Chromosome and associated proteins [BR:
lmix03036
]
132982639 (taf5l)
Transcription machinery [BR:
lmix03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132982639 (taf5l)
Coactivators
SAGA/TFTC/STAGA complex
132982639 (taf5l)
Chromosome and associated proteins [BR:
lmix03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
132982639 (taf5l)
STAGA complex
132982639 (taf5l)
TFTC complex
132982639 (taf5l)
SAGA complex
132982639 (taf5l)
SLIK complex
132982639 (taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
TFIID_NTD2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
NBCH_WD40
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
RMC1_N
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_WDR19_1st
WD40_like
PEP5_VPS11_N
Beta-prop_IP5PC_F
PROPPIN
Nbas_N
Beta-prop_ELP1_1st
WD_LRWD1
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
132982639
NCBI-ProteinID:
XP_060905137
LinkDB
All DBs
Position
2:complement(6890541..6895488)
Genome browser
AA seq
600 aa
AA seq
DB search
MKRVRAEQIQYAVAQYLKRRQYVDTDGSLKGAKLFQTAEEMAASLTVQTESGCANIVSAA
PCQSDPHQYETQYCRLRTFLSETDILWAKEVSSILYPLFVYLHLDMVQCGLKGAVDGFYS
RFHSTFLQESEQCAIIEQLRHVLTTQDIAANPRLSAFLEHKYIVHLTEPAYSYLLRYLQS
EDNSALCRAISTHLQVEVTASKRTDYQLYGAAGGAAAATNSTSSWAGVDGAEAREGVEVP
AGVSQSEAALEVLQDCIKKVREGPPTLTTVCFYAFHHTEQMLNTAEVSADSRLLSAGFDS
STVKLWSLRARKLKAKPHQADVSLIHLACDVLEEEVDEEDCSGSEIKTLRGHSGPVFRTA
FLTDSSGLLSCSEDTTIRYWDLSSFTNTALYQGHAYPVWDVDVSPCSLYFASGSHDRTAR
LWTFSRTYPLRLYAGHLSDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGASVRLFTGHRG
PVLSLAFSPNGKYIASAGEDQRVKLWDLSSGTLFKDLRGHTDSVTSLSFSPDSSLVASSS
MDNSVRVWDIRNSHSGTPADGSSSELVGLYTGNTNNVLNVQFMACNLLLVTGTAQEKTEQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgggttcgagctgagcagatccagtatgctgtggctcagtacctgaagaggagg
cagtatgtggacactgatggctccctaaaaggagccaaactcttccagactgctgaggag
atggctgcaagtctcacagtgcagacagagtcggggtgtgccaacatcgtgtctgctgca
ccatgccagtccgacccacatcagtatgagacccagtactgcaggctgcgcacctttctg
tcagaaaccgacatactatgggcaaaggaggtgagcagcatcctctacccactcttcgtc
tacctccacctggacatggtgcagtgcggcctgaagggggcagttgatggtttttacagt
cgtttccacagtacgtttctccaggagagtgagcagtgcgccatcatagagcagctccgc
catgtactcaccactcaggacatagcagcaaaccccaggctgagcgctttcctcgagcac
aagtatattgttcatttgacggagccggcatacagctacctgctgcgttacttgcagagc
gaggacaacagcgcactctgcagggcaataagcacacacctgcaggtggaggtcacggcc
tcaaagcgtacagactaccagctttacggagctgcgggcggggcagctgcggccaccaac
tccacctcatcctgggcgggagtcgacggagcagaggccagggaaggggtggaggtccca
gcgggcgtctcacagagtgaagcggcccttgaggttctgcaggactgcattaagaaagtc
cgcgagggcccccccacgctcaccaccgtgtgtttttacgctttccaccacacggagcag
atgttgaacacagccgaggtgtcagctgacagccggctgctgagcgccgggttcgacagc
tctaccgtgaagctgtggagcctcagagcaagaaaactgaaggctaaaccgcaccaggct
gatgtgtcgctcatccatctggcctgtgatgtgctggaggaggaggtggatgaagaggac
tgctctggcagcgagataaagactctgcgaggtcacagcggcccagtgtttcgcactgcc
ttcctgacggacagctctggcctgctctcctgctctgaggacacgaccatccgttactgg
gacctcagcagtttcaccaacacggcgctctaccagggccacgcctacccggtgtgggac
gtggacgtcagcccctgcagtctttacttcgccagcggctcccacgatcgaacggctcgc
ctctggacgttctcgcgcacctacccactgcggctctatgccgggcatctctctgatgtc
gattgtgtcaaatttcacccaaactccaactacctggctacaggctccacagacaagact
gtccgtctgtggagcacccagcagggggcgtcagttcgcctctttacaggtcatcgcggc
cctgtgttgtcacttgctttctctcctaatgggaagtacatcgcatcagctggtgaggac
cagagggtgaagctgtgggacttatcgtcagggactttgtttaaagacctgcgaggacac
acagacagcgtcactagcctgtccttcagtccggatagcagcctggttgcctcgtcatct
atggacaactcagtccgggtttgggacattcggaactcccacagcgggacgccagccgac
ggctcgtccagtgaacttgtgggactctacactggaaacaccaacaacgtgcttaatgtc
cagttcatggcctgtaacctgctgctggtgacgggaactgcacaagagaaaacagagcag
tag
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integrated database retrieval system
