Labrus mixtus (cuckoo wrasse): 132984083
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Entry
132984083 CDS
T10666
Symbol
tnxba
Name
(RefSeq) tenascin
KO
K06252
tenascin
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04510
Focal adhesion
lmix04512
ECM-receptor interaction
lmix04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132984083 (tnxba)
04518 Integrin signaling
132984083 (tnxba)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132984083 (tnxba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lmix00536
]
132984083 (tnxba)
Glycosaminoglycan binding proteins [BR:
lmix00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
132984083 (tnxba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_C
fn3
EGF_Teneurin
EGF_TEN
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
EGF_2
Fn3_Dep-1_3rd
EGF_Tenascin
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
132984083
NCBI-ProteinID:
XP_060906712
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Position
11:complement(20474519..20482205)
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AA seq
1224 aa
AA seq
DB search
MLLTLGLLLLLTPFPSFQTPTNEGRHSTGSEASKPNAVFTLSKPKTTAALTRQTIRPTLK
PNTVNQTISTPQAAKSKPSPAVIQTTPSASVKATIVSDTNTISEKHTVSVNQTALAKATK
DKLASASSAKTPKEKVQPAPTGVQNVQSTSTKSALARGATTTKNKPTASVNLSAVAKSSS
TSDAKNPKSKPDKATPSANQTAVVKPPTSTATKEKPAPSQPIKVVISDGCESSKAKEQEL
KLKPGAPLVMTHKISLLPGGCVGGCDAEMAALKGRVARLEMEMSSLKDKCPCSGNCPRDC
SGNGECQKGKCVCQQGFMGPDCSKCAQGAECNKKTAKGNVKVKVETVTLQLSKDKENMQE
KHTHVEQTLFQKKDQKKGSDTKVTDTKPKVATGAKAKHESSVKKITITKDSTSTGTRASR
PTVGQVLLKHEGRKQEEARKGKTIVLTSKKVLQRTDLKVVKEGTTSKTHPKSDQLKDQPH
ANVTAGNVRKSNGTAKIVTILTKVAGTNKTRAEKETLEQSTLTEKNATKSSGHKRIKVET
SNVQSVDNRNTDNSKIVKDKGAQRSQYLVNATTAGEAQILQDKTTSHSSGSARRIGGSGL
GSVKVVNISSYSFTITWSAPQGMFKNFTVVRREPRADGEEEDHDEFEGESFEREKVSTAK
NTTEVQVQSESLNSTAASGTAAGSKSKSETKRISMVVPGNVRSVEFSNLRANTGYVLQVY
GTTAERQSKIHRATAITGPEPATEIVFSNVTESSFTVSWSKPKTTFSGFKVTYTNIVTGE
SSFVTVDSQQSYVVLSKLSAGSSFIITVTTTHGRLQSDGLTSIMTTVPAPPTHLQVVNVT
DTRALLQWKPSLGKVDRFIISYESSKTPNVTVTVMLSGNSVAHQLRGLQRGTLYTVKVLS
QKDSLQSMAISTSFTTANVVKANEVGARSAVITWRTTTIVYHSYRLIYQVAGEETKELTL
DSSITEYKFTGLLPMSRYIVLVQGERDGQYTSVVTTEFLTGKLRFPFPTECSQELLNGAL
QSGEVDIYPQGKEGRAVRVYCDMEADGGGWTVFQRRMNGKTDFYRTWSEYSAGFGNLSEE
FWLGNELLHNLTSVGPVSLRVDMRSGNDTAYAHYANFSIDSAERHYSLEVSGYTGTAGDS
MRYHNGRPFSTRDKDPDPLGIHCARAYIGGWWYKNCYKTNLNGLYGINSNNQGIVWIDWK
GKDSSIPFTEMKFRPSRFSPATHG
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgctgttgacactaggacttctcctccttctcaccccattcccctcctttcaaacccca
accaatgaggggagacactcaacaggaagtgaagcatccaaaccaaatgccgtattcacc
ctttcaaagccaaaaaccactgcggctctcactagacaaaccattcgcccaaccctaaag
ccaaacacagtcaatcagactatttcgacccctcaagctgcaaaaagcaagcccagccca
gcagtaattcaaaccactccatcagcatcagtaaaggccactatagtcagtgacaccaat
acaatttcagaaaagcacacagtctctgtcaatcaaaccgctttagctaaggctaccaaa
gacaagcttgcatcagccagcagtgctaaaaccccaaaagagaaagtccaacctgcacca
actggagttcaaaatgttcagtcaacatccacaaaatcggctcttgcccgtggagctact
accaccaaaaacaagcccacagcctctgtcaatctgtctgctgtagctaaatcctcctcc
accagtgacgccaagaacccaaaaagcaagcctgataaggcaacaccctctgccaatcag
actgctgtagttaaacctcccacctccactgccactaaagaaaagccagccccttcccaa
ccaatcaaggtggtcataagcgatggctgtgagtctagcaaagccaaggagcaggagctg
aagctgaagcctggtgctccattggtgatgactcataaaatcagcttgttgcctggcggc
tgcgtcgggggatgtgatgctgagatggctgcgctgaaaggacgtgtggcgcgactggaa
atggagatgtcctccctcaaggacaaatgtccatgttctggaaattgtccacgtgactgt
agtggcaacggggaatgtcagaaggggaaatgtgtttgccaacagggattcatgggtccg
gactgtagtaaatgtgcacaaggggctgagtgtaataaaaagactgctaaaggaaatgtc
aaggtaaaagtggaaacagtgaccctgcagctgagcaaagacaaggaaaacatgcaagaa
aaacacacacatgtggagcagacacttttccagaagaaggaccaaaaaaaggggtctgac
actaaggtgactgacaccaaacctaaagtggctactggtgctaaagcaaaacatgaatct
tctgttaagaaaattaccattaccaaagactcaacttcaactggcacaagagctagtcgc
ccaacagttggtcaagttctgctgaaacatgagggaagaaagcaagaagaggcccgcaaa
ggaaaaacaatagtcctgacctcgaaaaaggtccttcaaagaactgacctcaaggttgtt
aaagaaggaactaccagtaaaacacatcccaaatctgaccaactaaaagaccaacctcat
gccaatgtaactgctggtaatgttaggaaatctaatggcacagccaaaattgtcaccatt
ctgaccaaagttgcaggaacaaacaaaacacgagcagagaaggagaccttggagcagtca
acacttactgagaagaatgctactaaatcatctgggcacaaacgcatcaaggtagaaact
tcaaatgtgcaatctgttgacaacagaaacactgacaacagcaagattgtaaaggacaaa
ggtgcacagaggagtcagtacttagtgaatgcaacaacagcaggtgaagctcagattctt
caggacaaaacgactagccacagttccgggagcgcaaggagaataggaggatctggatta
ggttctgtaaaggttgtaaacatctcctcctacagctttacaattacttggtctgcaccc
caagggatgttcaagaactttaccgtggtcagaagggagccaagggcagatggtgaggaa
gaggaccatgatgagtttgaaggagaatcttttgaaagggaaaaggtctccacagccaag
aacacaactgaagtccaggtacagagtgagagccttaactcaactgctgcctctggtaca
gccgctggatccaaaagcaaatctgaaaccaagaggatttctatggttgtccctggcaat
gtacgctcagtggagttcagtaaccttcgtgcaaacacaggctatgtcctgcaagtatat
ggtacaacagctgagagacaatcaaagattcacagagcaactgcaatcacaggtcccgag
ccagccacagagattgttttcagcaatgtcactgagtcttctttcactgtttcctggtcc
aaaccaaagaccacattctcaggcttcaaggtcacatacaccaacattgtcacaggggaa
agcagctttgtgaccgtggactcccagcaatcttatgtggttctgtccaagttatctgct
ggatcctcgttcatcatcactgtaacaaccacacacggcagattgcagagtgacggcctt
acatccattatgaccacagtgcccgcccctccaacacatctgcaagtggtcaatgtgaca
gataccagagctttgcttcaatggaaacccagtctggggaaagtggaccgcttcattatc
agctatgagtcctcgaagactcctaacgtgacagtgacagtgatgctatctggaaactca
gtggcgcaccagctgagaggcctgcagagaggtaccctgtacacagtcaaagtcctgagc
cagaaggacagtctccagagcatggccatctcaacttcatttactacggccaatgtggtt
aaagctaacgaggtgggtgctcgctctgcagtgataacatggaggacaaccactattgtt
tatcacagctacagactgatctaccaggtggcaggagaggagacaaaggagttgaccctg
gactcttctatcacggagtataagtttacaggactgttgccaatgtcccgttatattgtt
ctggtacaaggcgagagagatggacaatacacatctgttgtcaccacagaatttcttaca
ggaaaactgcgctttcccttccctactgagtgctctcaggagctgctgaacggggctctg
cagtcaggagaggtagatatctacccacaaggaaaagaaggacgggcagtgagagtctac
tgtgacatggaggctgatggaggtggctggacggtgttccaaaggaggatgaatggaaag
acagatttctacagaacatggagtgaatacagcgcaggcttcggaaaccttagcgaagag
ttctggctcggaaacgagcttctccacaacctcaccagtgtcggccctgtgagtctgaga
gtggatatgcgttcaggaaatgatactgcttacgctcattacgccaacttctccatcgac
tcagcagagaggcactatagtcttgaggtgtcaggctataccggaactgcaggggactct
atgaggtaccataatggccgtccattctcgacccgggacaaggatcccgatcctctgggg
atccactgtgccagggcttacattggaggctggtggtacaaaaactgctacaagaccaac
ctcaatggtctttatgggatcaacagtaataatcagggaatagtctggatagactggaaa
ggtaaagactcatccattcccttcactgagatgaagttcagaccgtccaggttctctcct
gcaactcatggctga
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