Labrus mixtus (cuckoo wrasse): 132984304
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Entry
132984304 CDS
T10666
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132984304 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmix03021
]
132984304 (taf5)
03036 Chromosome and associated proteins [BR:
lmix03036
]
132984304 (taf5)
Transcription machinery [BR:
lmix03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132984304 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
132984304 (taf5)
Chromosome and associated proteins [BR:
lmix03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
132984304 (taf5)
STAGA complex
132984304 (taf5)
TFTC complex
132984304 (taf5)
SAGA complex
132984304 (taf5)
SLIK complex
132984304 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_Vps41
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_SPT8
Tricorn_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_Nup120_160
WD_LRWD1
PEP5_VPS11_N
LisH_PAC1
PROPPIN
VPS8_N
LisH_TPL
CDK5RAP3
Beta-prop_ACSF4
RAB3GAP2_N
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
132984304
NCBI-ProteinID:
XP_060907078
LinkDB
All DBs
Position
2:10221873..10227958
Genome browser
AA seq
749 aa
AA seq
DB search
MAAVQGGLVDAVEEKDIKTEPSNDSGGNNNAGEARLLSPSPGSSASAGSAKSTTGAPEDQ
STLLAVLQFLRKNKLTESVDILRREAGLPEDVLDSKGTDGSGAGSGAAADSADAAGGDAS
ALLSRVTGSSSAPAPAPTKAPGEDQPDVNVVLSAYSQQGDPALYGVYYNGLKRFIESVLD
CHRAELSQLFYPLFVHMYLELVYNNHENEAKVFFEKFSGDQECYYADDLRVLSSLTKKEH
MRGNETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPRSKS
QIDAMSGSLAGEAKREANKAKVYYGLLKEPEIELPLDDEDEEAENEEGKPKKKKPKKDSM
GSKSKKQDPNAPSQTRIPLPELKDSDKLDKIMYMKEATKRIRLAPDNLPSICFYSFLNAY
QGLTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRKVKSAADLNLIDKESDDVLERIMDE
KTASESKILHGHSGPVYGISFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWD
TQFSPHGYYFISGGHDRVARLWATDHYQPLRMFSGHLADITCTRFHPNSNYVATGSSDRT
IRLWDVLSGNCVRIFTGHKGPIHALAFSPNGKYLASGATDGRVLLWDIGHGLMIGELKGH
TDTIYSLKFSRDGEILASGSMDYTVRLWNAMKAYDDLETDDFTATTGHVHLQDNSQELLL
GTYMTKSTPVIHLHFTRRNLLLAAGAYNP
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtgcagggtggtctggtcgacgctgttgaggaaaaagatataaaaacagaa
ccatcgaacgatagcggaggaaataataatgcaggcgaagcccgactgctctccccgtcc
cctggctccagtgcgtcggcgggaagtgctaaaagtacgacgggagccccggaggaccag
tctacgctgctggctgtcctgcagttcctcagaaagaacaaactcaccgagtccgtggac
attttgcgtcgtgaagcgggattaccggaggatgtactcgattcaaaaggtaccgatggc
tccggggcaggttcgggtgctgcagcggacagtgcggacgcagcaggcggagatgcgagc
gctttactcagccgagtgaccggctcatcctccgcgccagccccggcgcccaccaaagct
cctggggaggatcagccggatgtcaacgtggtgctgtcggcttacagccagcagggagac
ccggcgctgtatggggtttactacaacggcctgaagaggttcatagaatctgttctggac
tgtcaccgagcagagctgtcccagttgttttacccgctgttcgtgcacatgtacctggag
ctggtgtacaacaatcacgagaatgaagccaaggtgttctttgaaaagttcagcggggat
caggagtgctactatgcagacgacttgcgcgttttgtcaagtctgacaaagaaggagcac
atgagaggcaacgagaccctgctggacttccgcaccagcaagttcgtactccgtatctcc
cgcgactcttaccagctgctcaagaggcatctgcaggagcgtcagaacaaccagatctgg
aatatcatccaggagcacctctacatcgacatctttgatggcatgccgcgcagtaagagc
cagatcgacgccatgtcgggcagcttggctggagaagcgaagcgggaggcgaacaaggct
aaggtttactacggactgctgaaggagccagaaatagagctgcctcttgatgatgaggat
gaggaggcagagaatgaggaaggtaaacccaagaagaagaaacccaagaaggacagcatg
ggctccaagagcaagaagcaggatcctaatgcaccttcacagaccaggatacctctacca
gagttaaaggattcagacaagctggacaagatcatgtacatgaaggaggccaccaaaagg
atccgcctggcaccagataacctcccctccatctgcttctactcttttctcaacgcttac
cagggtttgactgcagtggatttcacagatgactccagcctgatcgccggaggcttcgct
gactccaccgtacgagtgtggagtgtcacaccgaaaaagctccgcaaggtcaagtctgca
gcagacttgaatctgattgacaaagagtcggacgacgtgctggagaggatcatggacgag
aagacggccagcgagtcaaagatcctccatggacacagtggcccggtatacggcatcagc
ttcagcccagacaggaactatttgttgtcaagttctgaagatggtacaatcaggctgtgg
agtctgcaaacattcacttgtctggtgggctacaaaggccacaactacccagtgtgggac
acccaattctcccctcatgggtactactttatctctgggggacatgaccgagtggcccgc
ctgtgggcaacagatcactaccagcccctgcggatgttttctggtcacctagcagatatc
acttgcacccgcttccaccccaactccaattatgttgccacaggatcatctgatcgaacc
atccggctctgggacgtcctgagcggaaactgcgttcgcatctttaccggtcacaagggt
cctatccatgcgctggctttttctcccaatgggaagtacttggcttcaggagcgactgat
ggcagagttcttctgtgggacatcggccatggacttatgattggggagcttaaaggccac
actgacacaatctactccctcaaattcagcagagacggagagatcctggcctctggctca
atggactacactgtccgtctgtggaacgcgatgaaagcttacgatgatttagagacggac
gatttcacagcaaccacaggacacgtccatctacaagacaactcccaggagcttctgcta
ggaacctacatgaccaaatccacacccgtcattcaccttcacttcacccgcaggaacctg
ctgctagccgctggggcctacaatccatga
DBGET
integrated database retrieval system
