Labrus mixtus (cuckoo wrasse): 132984683
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Entry
132984683 CDS
T10666
Symbol
trim54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
132984683 (trim54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmix04121
]
132984683 (trim54)
Ubiquitin system [BR:
lmix04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
132984683 (trim54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-B_box
RING_XB3-XBAT31
zf-RING_6
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
zf-RING_2
TRIM_CC
Sina_RING
DUF1664
CoiA_N
DUF1421
Zn_ribbon_FGT1_2
Hex_IIIa
Motif
Other DBs
NCBI-GeneID:
132984683
NCBI-ProteinID:
XP_060907547
LinkDB
All DBs
Position
12:complement(4115686..4139261)
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AA seq
367 aa
AA seq
DB search
MNFALGFKPPSAGSSGPGAGRGATMENLEKQLICPVCLEIFSKPVVILPCQHNLCRKCAN
DIFQSANPLWQSRGSSGISVSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENILDLYRQH
ESTRLVDMKPEPQQQQHLMCDDHDEEKINIYCLSCQTPTCSMCKVFGKHKDCDVAPLSSV
YIRQKTELSDGIATLVATNDHIQAVISQMEESCRSIEENGKRTGEKLADSFDTLVAILEE
RKQELVGLIAKQQDDKLKHVRCLIRQHHDDLEGAVTLVESAIQLMEEPHMPLFIQSAKVI
LEKMTETARASDIERPELGFESMSHFSIDTDDLAVMLMNIDFCSGVGDDGEEDLEEGEEE
SELELRY
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgctctcggcttcaagcctccatcagcaggcagctcggggcccggtgctgga
aggggagccaccatggagaaccttgagaagcagctaatctgcccggtctgcctcgaaatc
ttctccaaacccgtggtcatcctgccctgccagcacaacctctgccgcaagtgtgccaat
gacatcttccagtcagcgaaccctctgtggcagtcccgcggctcctccggcatctctgtg
agcggcggtcgctttcgctgtccgtcttgccgccacgaggtggtgctcgaccgccatgga
gtctacggtctgcagaggaacctgctggtggagaacatcttagacctgtacagacagcat
gaatcaaccaggcttgtagacatgaagcccgagccgcagcagcagcagcatctgatgtgt
gacgaccacgatgaagaaaagatcaacatctactgcctgtcctgtcagacgccgacctgc
tccatgtgcaaagtgttcggcaaacacaaagactgtgatgtggcgccactcagcagcgtc
tacatcagacagaagactgagctgagcgacggcatcgcaaccttggttgccactaacgac
cacatccaggcggtgatctctcagatggaggaaagctgccgctctatagaggagaacggg
aaacgaaccggagaaaagctggccgacagtttcgacaccctggtcgccatcttggaggag
cgtaaacaggagctggtggggctcatcgccaaacaacaggacgacaaactcaaacacgtc
cgctgtctcatacgtcagcaccacgacgacctggagggcgccgtgacgctggtggagtcg
gccattcagctgatggaggagcctcacatgccgctgtttattcagagtgccaaagtcatt
ctggagaaaatgacagagacggcccgggcctctgacattgagcgtcctgagcttggcttt
gagagcatgagccacttctctatcgacaccgacgacctcgccgtcatgctgatgaacatt
gacttctgctctggtgttggagatgatggagaagaggatcttgaagaaggggaagaggag
tcagaacttgaattgagatattaa
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