Labrus mixtus (cuckoo wrasse): 132984889
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Entry
132984889 CDS
T10666
Symbol
htt
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
lmix Labrus mixtus (cuckoo wrasse)
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmix03019
]
132984889 (htt)
04131 Membrane trafficking [BR:
lmix04131
]
132984889 (htt)
03029 Mitochondrial biogenesis [BR:
lmix03029
]
132984889 (htt)
Messenger RNA biogenesis [BR:
lmix03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
132984889 (htt)
Membrane trafficking [BR:
lmix04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
132984889 (htt)
Mitochondrial biogenesis [BR:
lmix03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
132984889 (htt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_EF3_N
HEAT_ECM29
DUF6406
Motif
Other DBs
NCBI-GeneID:
132984889
NCBI-ProteinID:
XP_060907903
LinkDB
All DBs
Position
2:11354837..11391974
Genome browser
AA seq
3173 aa
AA seq
DB search
MATMEKLMKAFESLKSFQQQQGPPTAEELVQKQKKEQATTKKDRVTHCLTICENIVAQSL
RTSPEFQKLLGIAMEMFLLCSDDSESDVRMVADECLNKIIKALMDSNLPRLQLELYKEIK
KNGASRSLRAALWRFAELAHLIRPQKCRPYLVNLLPCLTRITKRQEETVQETLAAAMPKI
MAALGHFANDGEVKVLLKSFIANLKSSSPTIRRTAASSAVSVCQHSRRSSYFYTWLLNVL
LGLLVPVDEEHPSHLILGVLLTLRYLMPLLQQQVNTASLKGSFGVMRKEADVQPTPEQLL
QVYELTLHYTQHWDHNVVTAALELLQQMFRTPSPELLHMLITPGSISHVTVFRQDIESRA
RSGSILELIGKILSGDEDGLEDDAERTEVTTGSFTASVVGADGSSPAQVDIITEQPRSQH
TLQPGESVDLSASSEQGGGTSASDTPESPNDNEEEMLSRSSSGGANITPETADYTTPENA
TPEGGPLGAGGTLLGTNDRSLPPSDSSQTTTEGPDSAVTPSDVAELVLDGSESQYSGMQI
GTLQDEEDEGVAPSSQEEPSEPFLQSALALSKPHLFEGRGHNRQGSDSSVDHLIPKDEPA
EPEPDNKPSRIKGPIGHYTDQGVEPLVHCVRLLAASFLLTGQKNGLTPDKEVRVSVKALA
VSCVGAAAALHPEAFFNSLYLEPLDGTPVEEQQYVSDILGLIDHGDPQIRGATAILSAAI
IQAALTKTRFNIHTWLASVQSATGNPLSLVDLVPLLQKTLKDESSVTCKMACSAVRQCLM
TVCSSTLSELGLQLVIDLLALRDSSYWLVRTELLETLAEMDFRLLNFLEMKTETLHKGDH
HYTGRLRLQERVLHDVVINLLGDDDPRVRHVAASAVSRLVPRLFFECDQGQVDPVVAIAR
DQSSVYLQLLMHETQPPSQLTVSTITRTYRGFNLSNNVADVTLENNLSRVVTAISHAFTS
STSRALTFGCCEALCLLTTKFPPCTWNTGWFCGYVSSSSGFSSRSSLNRSRGRAFSAPAT
STTSSSAADTERRTLTVGMANMALSLLSSAWFPLDLSSHQDALVLSGNLLAAVAPKCMRN
PWAGDEEGSSGSTNTSGGPNKMEEPWAGLSERSLVAMVEQLFSHLLKVLNICTHVMDDTP
PGPAVKATLPSLSNTPSLSPIRRKGKDKDSAEPSAAPMSPKKSSEVNTGRPADNTGSTAV
NKSTTLGNFYHLPPYLKLYDVLKATHANYKVSLDLHSSQEKFGGFLRSTLDVLSQLLELA
TLHDISKCVEEILGYLKSCFSREPTMATVCVQQLLKTLFGTNLASQYEGVLSGPSRTQGK
ALRLGSSNLRPGLYHYCFMAPYTHFTQALADASLRNMVQAEAEQDTSGWFDVMQKASNQL
RSNIANATRHRGDKNAIHNHIRLFEPLVIKALKQYTTSTSVTLQRQVLDLLAQLVQLRVN
YCLLDSDQVFIGFVLKQFEYIEVGQFRDSEAIIPNIFFFLVLLSYERYHSKQIISIPKII
QLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGSNKADAGKELDTQKEVVVSMLLRLVQY
HQVLEMFILVLQQCHKENEDKWKRLSRQIADVILPLIAKQQMHLDSPEALGVLNTLFETV
APSSLRPVDMLLKSMFTTPASMASVTTVQLWVSGILAVLRVLISQSTEDIVLSRIHELSL
SPHLLSCHTIHRLHQQSPSQNEQTTIDTLCNQESKDETQKAPPEETFARFLLQLVGVLLD
DISSRQIKVDITEQQHTFYCQQLGTLLMCLIHVFKSGMFRRITAAASRLLKDESGGGQTS
TEANLFYPLEGLNSMVQCLITTHPSLVLLWCQVLLIINYTNYSWWAEVHQTPRRQSLSCT
KLLSPHSSGEGEEDKPEARLAMVNREIVRRGALILFCDYVCQNLHDSEHLTWLIVNHVRD
LISLSHEPPVQDFVSAVHRNSAASGLFIQAIQSRCDNLSAPTMLKKTLQCLEGIHLSQSG
SLLMLYVDKLLSTPFRVLARMVDTLACRRVEMLLAETLQNSIAQLPVEELDRIQEYLQTS
GLAQRHQRFYSLLDRFRATVTDTKSPTPPVTSHPLDGNPPPAPELVIADKEWYVALVKSQ
CCLRGDVSLLETTELLTKLPPADLLSIMSCKEFNLSLLCPCLSMGLQRLARGQGSLLFET
ALQSTLERLAAITGSLPVPHQSFLPASQPQPYWEQLAAVYGEPGFYPRVLSLCRALSQYL
LSVSQLPSSLHIPSEKEHLITTFTCTAAEVVVWHLLRDKLPLSVDLQWALSCLCLSLQQP
CVWNKLSTPEYSTHTCSLIYCLRLIIVAVAVSPGDQLLHPEKKRTKADRDGEEDQVDSAH
ADHMLEWRACEIMAELVEGLQSILALGHHRNGSFPAFLTPTLRNIVISLSRLPLVNSYTR
VPPLVWKLGWSPQPGGEFGTTLPEIPVDFLQEKDVFREFLYRINTLGWSSRTQFEETWAT
LLGVLVTQPITMDQEEETQQEEDLERTQLNVLAVQAITSLVLSAMTLPTAGNPAVSCLEQ
QPRNKSLKALETRFGRKLAVIRGEVEREIQALVSKRDNVHTHHPYHAWDPVPSLSSASAA
GTLISHEKLLLQINTEREMGNMDYKLGQVSIHSVWLGNNITPLREEEWGEDEEDETDIPA
PTSPPVSPINSRKHRAGVDIHSCSQFLLELYSQWLIPGSPTNRRTPTILISEVVRSLLAV
SDLFTERNQFEMMFTTLMELQKLHPPEDEILNQYLVPAICKAAAVLGMDKAIAEPVCRLL
ETTLRSTHLPSRMGALHGVLYVLECDLLDDTAKQLIPIVSDYLLSNLRAIAHCVNLHNQQ
HVLVMCAVAFYMMENYPLDVGADFMAGVIQLCGVMVSASEDSTPSVIYHCVLRGLERLLL
SEQLSRVDGEALVKLSVDRVNMPSPHRAMAALGLMLTCMYTAVLASGSDVTGVRGQGDSG
SAVAEALGVTTGHVGFSSGKEKASPASRPTHSDPQAPDSESIIVAMERVSVLFDRIRKGL
PSEARVVSRILPQFLDDFFPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQTLHATGQS
SMVRDWVLLSLSNFTQRTPVAMAMWSLSCFFVSASTSQWISALLPHVISRMGSSEVVDVN
LFCLVAMDFYRHQIDEELDRRAFQSVFETVASPGSPYHQLLGCLQSIHQDTTL
NT seq
9522 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaaactgatgaaggcctttgagtctctgaagtctttccagcagcaa
cagggcccaccgacagcagaggagcttgtccagaaacagaaaaaggaacaggctaccacg
aagaaggacagggtcacccactgcttgacaatatgtgaaaacattgtggctcagtctctg
agaacgtctccagagttccagaaactgctcggcatcgccatggagatgttcctgctctgc
agtgatgacagtgaatcagatgtccgtatggtagcagatgaatgcctgaacaaaatcatc
aaagcactgatggactccaacctgcctagactgcagctggagctgtacaaagaaataaag
aagaatggtgcctcccgcagtctaagggcagctttgtggaggtttgctgagcttgcccac
ctcatcagaccacagaaatgcagaccctacctggtcaacttgttgccatgcctcaccaga
attaccaagaggcaggaggagacagtacaggagacgcttgctgcagcaatgcctaagatc
atggctgccctgggacactttgccaatgatggcgaggtcaaggtgctgctcaagtcattt
attgccaacctgaaatccagttcccccaccatcagacggacagcggccagctcagctgtc
agtgtgtgccaacactccagacgctcgagctacttctacacctggcttcttaatgtgctc
ctgggtctgcttgtcccagtggatgaggagcaccctagtcacctaattctgggggtgctg
ttaacccttcgctatctgatgcctctgctgcagcaacaagttaacacagccagcctcaaa
ggaagctttggagtcatgaggaaggaggctgatgttcagcctactcctgaacaacttctt
caggtgtacgagctgaccctacactacacacaacactgggatcacaatgtggtcacggcg
gctctggagcttttgcagcagatgttcaggactccctctccagagcttctgcacatgctc
atcacccctggcagcatttcacatgtaactgtgtttcgccaggacatcgagagccgcgcg
cgctctggcagcatcctcgagctcattggtaaaatcctttctggggatgaggatgggctg
gaagatgatgcagagagaacagaggtcactactggttcctttacagcatctgttgttggg
gcagatggctcctccccggcgcaggtggacatcatcactgagcagccacgctcacagcat
accttgcaacctggtgaatctgtggacctcagtgcgtcctctgagcaaggaggcgggaca
tctgcatcagacactccagagtcacccaacgacaatgaggaggaaatgctgagtcggagc
tctagcggcggggccaacatcactccggagacggctgactacaccacaccagagaatgct
acccctgagggagggcccttaggagcaggcgggactttgcttggtactaatgaccgctcg
cttccgcccagtgactcctcccagaccaccaccgagggaccagattcagctgtcactcct
tcagacgtagcagaactggtgctggatggcagtgagagccagtactctgggatgcagatc
ggaacactacaggatgaagaagatgaaggagttgcaccttcctcccaagaagaaccctca
gaaccattcctgcagtcagcactggctctgagcaagcctcatctctttgagggcagaggc
cacaacaggcagggttcagacagcagtgtggaccaccttatacccaaggatgaacctgct
gaacctgaacctgacaacaagccttcacggattaagggtccaattggacattatacagac
cagggggtggagccgcttgtgcactgtgtacggcttctcgctgcttccttcttgctgaca
ggacagaagaatgggcttacccctgacaaggaggtgcgagtgagtgtaaaagctctggct
gtcagttgtgttggggcagcagcggcgctgcatccagaagcgttctttaattccctctac
ctggagccgctggacggcacaccagtggaagagcagcagtatgtcagtgacatactgggc
cttattgaccacggggaccctcagatcagaggggccacagccatcctctctgcagccatt
attcaggcagcactcaccaaaacccgtttcaacatacacacctggctggccagtgtgcaa
agtgcaacaggtaaccccctgtccctggtggacttggttcctttgctccagaaaaccctg
aaagatgaatcatctgtcacctgcaagatggcctgctcggcagtgaggcaatgcctcatg
actgtgtgcagcagtaccctgagtgagcttggtctgcagttggtgatagacctgcttgct
ttgagggactcctcctattggcttgttcgcacagagctcttggagaccctggctgagatg
gacttccggttactcaatttcttagagatgaaaacggagactttgcacaaaggggatcat
cactacactgggcggctgcggctccaggaacgagtcttacatgacgtggtcatcaatctg
ctgggagatgatgacccaagagttcggcacgtggcagcctcagctgtcagcaggctggtt
ccaaggttgttctttgaatgtgaccagggtcaagtcgacccagtggtggcaattgcccgg
gaccaaagctcagtctacctgcagctgttgatgcatgagacccaacctccctctcagttg
acagttagcacaatcacaaggacatacagaggcttcaacttgtccaacaatgtggctgat
gtcacattggagaataatttgtccagagtggttactgccatctcccatgcttttacctcc
tcgacctccagagcccttacttttggctgctgtgaggcattgtgcctattgaccacaaag
tttccaccctgcacttggaacacaggctggttctgtggctatgttagctccagtagtggt
ttttcttctcgctctagtctcaaccgcagcaggggaagagctttcagtgcaccagccact
tcaaccacttcctcatctgctgcagacactgagcggagaactctgacagtgggaatggcc
aacatggccctctccttactgtcatctgcctggtttccactagatctttcttcacaccag
gatgcacttgtgctttctggcaatctgcttgccgctgtggctcctaaatgcatgcgcaac
ccctgggctggagatgaagaaggcagcagtggcagcacaaacactagtggaggcccgaat
aagatggaggaaccctgggcagggctgtctgagcgctccttggtagcaatggtggagcag
ctcttctcccacctgctgaaagtcctcaacatttgcacccatgtcatggatgacacacca
cctggaccagctgttaaggccacccttccatccctgagcaacactccctcactcagtccc
attcggagaaaaggcaaggacaaggattctgctgagcctagtgctgcccctatgagccca
aagaaaagcagtgaggtcaacacaggtaggccagcagacaacacagggtcaacagctgta
aacaaatcaaccacccttggcaacttctaccatcttccaccctatctcaagctgtacgat
gtcctcaaagctactcatgccaactataaggtatcactggacctccacagtagccaggag
aagtttggaggtttcctgcgctccaccttagatgttctgtctcagctcctggagctggcc
acactacatgacatcagcaagtgtgttgaggaaatcttgggctacctaaagtcctgtttc
tccagagaaccaacaatggctactgtttgtgtacaacagctgctgaagactctgtttggc
accaacttggcttcccagtacgagggcgtcctgagtggaccaagccgaacccagggcaag
gctctccgcctaggctcgtccaatctgcgaccaggcctctaccactactgcttcatggca
ccatacactcactttactcaggctcttgctgatgcaagtctgcgcaacatggtgcaggct
gaagcggagcaagacacttccggatggtttgatgtaatgcaaaaagcttcaaaccagctt
aggtccaacattgcaaatgcaacacgccacagaggagacaagaatgccatccacaaccac
attcgtctctttgagcctctggtgatcaaagctttgaagcagtacactacgagcacttct
gtgaccctgcagagacaagtactggacctgctggcccaacttgtgcagctcagagtcaac
tattgtctgctggactcagatcaggtgttcatagggtttgtcctgaagcagtttgagtac
attgaggttggccagttcagagattccgaggcgatcattcccaacatctttttcttcctg
gtgttgctgtcttatgagcgttaccattctaagcaaataatcagcatcccaaagatcatc
cagctgtgtgatggcattatggcgagtggcaggaaagctgtcacacatgccattccagcc
ttgcagcccatagtgcatgacttgtttgttttgaggggctcaaacaaagcagatgcaggc
aaagagctggacacacagaaagaagtggtggtctccatgctgcttagacttgtgcaatac
catcaggtgctggagatgtttatccttgtgctgcagcagtgtcacaaagagaatgaagac
aagtggaagcgattgtccaggcagattgctgatgtgatacttccattgattgctaagcag
cagatgcaccttgactctccggaggcgttgggggtgttaaacactctgtttgagaccgtg
gccccctcctctctgagaccagtggacatgctactcaagagtatgttcaccaccccggca
agcatggcatcagtaactacagtccaactgtgggtgtctggtatcctggcggtgctccga
gtactcatctcccagtccactgaggacattgtcctctcccggatccatgaactttccctc
tctccgcatctcctctcctgccacacaatccatcgcctccatcagcagagcccttcccaa
aatgaacaaaccactattgatactctctgtaaccaggagtctaaggatgagacacaaaaa
gctccacctgaggaaacctttgccaggtttctgctccagcttgtaggagtgttgttggat
gacatttcctccagacagattaaggtggacattacagagcagcaacacaccttttattgc
cagcagctggggacactactcatgtgtctcatacatgtcttcaaaagtggaatgtttcgc
aggatcacagctgcagctagccgtctcctaaaggacgagagcggaggcggacagactagc
actgaggcaaaccttttttaccccttggagggtctcaacagcatggtgcagtgcttgatc
accacccacccctccctagtgctgctgtggtgccaggttctcctcatcatcaactacacc
aactactcctggtgggcagaggtgcaccagacacccaggagacaaagcctgtcatgtacg
aagctactgagccctcattcctcgggggaaggagaagaggacaagcctgaggctcgttta
gccatggtcaacagagagattgtacgcaggggagccctcatcctcttctgtgactatgtg
tgtcagaacctccatgactcagaacacctgacgtggctgattgtcaaccatgtgcgtgac
ctcatcagcctttcccatgagcctccagtgcaggatttcgtcagtgctgtgcaccgcaac
tcagctgccagtggtcttttcatccaggcaatccaatcccgctgtgacaacctctctgct
cctaccatgttaaaaaagactctgcagtgtttagaaggcattcacctgagtcagtctggc
tccctgctgatgttgtatgttgacaagctgctaagcacacccttcagggttctggctcgc
atggtggatacacttgcatgtcgcagggtggagatgctgctggctgagaccttgcagaac
agtatagcccagctgcctgtggaagaactggaccggatccaggaatacctgcagaccagc
ggcctggctcagaggcatcagaggttctactccctgctggacaggttcagggccactgtt
acagacaccaaaagcccaacacctcctgtaacatctcacccattggatgggaatccacca
cctgcccctgaactggtcattgcagataaggagtggtacgttgctctggtgaagtctcag
tgttgccttcgtggagatgtctccctgttggagacgacggaactccttaccaaactacct
cctgctgacctgttaagcatcatgagctgcaaggagttcaacctgagcctgctatgtccg
tgcctgagtatggggttgcagcggttagcccggggtcagggttcactcttgttcgagact
gccttgcagtccaccctggagcgtcttgcagcaatcactggatcacttccagtccctcac
cagtccttcctgccagcctcccagccacagccctactgggagcaactagctgctgtgtat
ggggagcctggtttctacccgagggttctgtcactctgcagagctctttcccagtacctg
ctgagtgtaagccagctgccttcctccctacacatcccctctgaaaaggagcaccttatc
accactttcacttgcactgctgctgaggtggttgtatggcacctcctccgggacaagctg
cccctgagtgtggacctccagtgggctctgtcctgcctttgtctgtccctgcagcagccc
tgcgtctggaacaagctctccacccctgagtacagcacacacacctgctccctcatctac
tgcctacgcctcatcattgttgcagtcgctgtgagtcctggtgaccagcttctgcatcca
gagaagaaaaggacgaaggcagacagagacggtgaagaagaccaagtggactctgcacac
gctgaccacatgttagagtggcgagcttgtgaaatcatggcagagctagtggaaggcctg
cagagcatccttgctcttggtcaccatagaaatggttcattccctgctttccttacacct
accttgcgcaacattgtcatcagcctgtctcgtctcccactggtcaacagctacactcga
gtacctccattggtctggaaactgggctggtcccctcagccgggaggtgagtttggcaca
acactgcctgagatccctgtggacttcctgcaggaaaaagatgtcttcagagagtttctg
taccgcatcaacacactgggttggagcagcaggactcagtttgaggagacctgggctact
ctgttaggggtgctggtcacccaaccaatcactatggaccaggaggaggagacacagcag
gaggaggacttggagcgtacccagttgaatgtgttagcagtgcaggccatcaccagcctg
gtgctgagtgccatgaccctgcctactgctggaaaccctgcagtcagctgtctggaacag
cagccccgcaataagagcctcaaagccctggagacaaggtttggtaggaaacttgcagtg
atcaggggtgaggtggagagagagattcaggcccttgtgtcaaagagagacaatgtccat
acacaccacccataccacgcctgggaccctgtaccctcgctgtcgtccgcctcagctgcc
ggcaccctaatcagccatgagaagctgctgcttcagatcaacacagagagggaaatggga
aacatggactacaaattaggacaggtctccatccactcagtttggctagggaacaacatc
accccactgagagaggaagaatggggtgaggatgaagaagatgaaacggacattccagcc
cccacttccccccctgtttctcccatcaactccaggaagcatcgtgcaggtgtggacatt
cattcatgttcccagtttctcctggagctctacagccagtggctgatccctggctctcca
actaacaggaggaccccaaccatactcatcagtgaagtggtccgatcgctgctggcagtg
tctgacctgttcacagagaggaaccagtttgaaatgatgttcaccaccctgatggaactg
cagaagctccaccctccagaagatgagatccttaatcaatacctcgtccctgccatctgt
aaggctgctgctgtactgggcatggacaaagcaatagccgagcctgtgtgtcgactgctg
gaaactaccctgcgtagcacccacctgcccagccgtatgggggctctgcatggagtactg
tatgtgttggagtgtgacctgctggatgacacggccaaacagcttataccaattgtctct
gattatctactgtcaaacctcagggctattgctcactgtgtgaacctgcataaccagcag
catgtgttggtaatgtgtgcagtggccttctacatgatggagaactaccctctggatgtt
ggagctgactttatggctggggttatacagttgtgtggtgtgatggtgtcagcaagcgag
gactctactccctcagtcatctatcactgtgtgcttcgtggtctggagcgccttctgctg
tcagagcagctgtctcgtgttgacggagaagcgctggtcaaactaagtgtggacagagtc
aacatgccgtcgccgcacagagccatggctgccttgggcctcatgctcacctgcatgtac
actgcggtgcttgcgtcgggttcagacgtgacaggggttagaggtcagggtgactctggc
tctgccgtagcagaggcgctgggcgttacgacgggtcatgttggtttctcctcaggcaag
gagaaagccagccctgccagtcgccccacccactctgacccacaggccccagacagtgaa
tccatcattgttgccatggagagggtctcggtgctctttgacaggatccggaaaggttta
ccaagcgaggctcgggtggtgtccaggattttaccccagtttctagacgacttcttcccg
ccacaggacgtcatgaacaaggtcatcggagagttcttgtctaatcagcagccttaccca
cagttcatggccactgttgtctacaaggttttccagacactccatgccactggccagtct
tctatggtgcgagactgggtgctgttgtccttgtctaacttcacgcagaggacaccagta
gccatggccatgtggagtctctcctgtttctttgtctctgcgtcaacctcccaatggatc
tcagccctactgccacatgtgatcagcagaatgggctccagtgaggtagtggatgtaaac
ctgttttgtctcgtggcaatggatttctaccggcaccagattgacgaggagctggaccgc
agggctttccagtccgtctttgagacagtggcgtctccaggcagcccttaccaccagctg
ctgggctgcctgcagtcaatccaccaggacacaaccctgtga
DBGET
integrated database retrieval system
