Labrus mixtus (cuckoo wrasse): 132984997
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Entry
132984997 CDS
T10666
Symbol
fdft1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix00100
Steroid biosynthesis
lmix01100
Metabolic pathways
Module
lmix_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
132984997 (fdft1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lmix01006
]
132984997 (fdft1)
Enzymes [BR:
lmix01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
132984997 (fdft1)
Prenyltransferases [BR:
lmix01006
]
Terpene biosynthesis
Squalene/phytoene synthase
132984997 (fdft1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Octopine_DH
HAUS4
GBP_C
TM1266-like
Motif
Other DBs
NCBI-GeneID:
132984997
NCBI-ProteinID:
XP_060908075
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All DBs
Position
12:complement(13508505..13517202)
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AA seq
458 aa
AA seq
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MAGACCKCPVSLSVLRRSLTVAPRGCGSAPPRSHLLGWRLGERGLQEAARPSSAFRPAGV
YRHTALLCVSCQESMSESLRTCYLYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDT
VEDDMSIPLDKKVPMLNDFHTYLYQDEWCFTESQEKDRQVLEDFPTISLEFRNLAKEYRD
VISDICNRMGVGMADFLEKKVGSMKEWDLYCHYVAGLVGIGLSQLFSASQLEDPEVGRDT
DLANSMGLFLQKTNIIRDYLEDTQQGRAFWPQEAWSQFAGHLEDLAQPEKLDSALSCLNL
LVTDALRHVPDVIAYLSRLRNQSVFNFCAIPQVMAIATLSTCYNNPMVFQGVVKIRKGQA
VTLMMEATNMRAVQSIIAQYSQEILQKVSLTDPSRDKTLHILALIREKSALSQSSLPSRT
HHLSPMYLSAAMLLAALSWQYLSTTAAQAQDTGDMQGQ
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggccggagcatgctgcaagtgtccggtgtctctctccgtgctcaggcgttctctcacg
gtggctccgcggggctgcgggtccgctcctcctcggtcccaccttctgggctggaggctg
ggggagcggggcctgcaggaggccgccagaccctccagtgcgtttagacctgcgggagtt
taccgacacactgcccttctctgtgtctcctgtcaggagtccatgagcgagagtctgcgg
acctgttacctgtacctgaaccagaccagccggagtttcgcagctgtgattcaggctctg
gacggagagttaagacacgcagtttgtatcttctacctggtgctgcgagcgctggacacc
gtggaggatgacatgagtatccctctggacaagaaggtgcccatgctgaatgatttccac
acctacctgtaccaggatgagtggtgcttcacagagagccaggagaaagaccgacaggtt
ctggaggatttccccacgatatcactggaatttagaaaccttgccaaggagtacagagac
gtcatctcggatatctgcaaccgtatgggagtgggaatggctgacttcctggagaagaaa
gtgggatccatgaaggagtgggacctgtattgccactacgtcgctggtctggtcggcatc
ggtctgtctcagctgttctctgcgtcccagctggaggaccccgaggtgggccgggacaca
gacttggcaaactccatgggcctgttcctccagaagacaaacatcatcagagactaccta
gaggacacgcaacagggacgtgccttctggccacaagaggcctggagtcagtttgcaggt
catctcgaggacttggcccagccagagaagctggactcggctctctcctgcctcaacctg
ctggtcactgacgctctgagacacgtcccggatgtcatcgcgtacctgtcccgcctgcga
aaccagagcgtcttcaatttctgtgccattccacaggtgatggcgatagcgacgctatca
acatgctacaacaaccccatggttttccagggagtggtgaagatcagaaagggacaggcc
gtcacactcatgatggaagccaccaacatgagagcagtgcagagcatcattgcccagtac
agccaggagattttacagaaggtctctctcactgacccatcacgggataagaccctgcac
atcctggctctaatcagagagaagtcggctctctcccagtccagcctcccctcccggacc
caccacctgtcgcccatgtacctgtctgctgctatgctgctcgccgccctcagctggcag
tacctcagcactacagctgcacaggcacaggacactggagacatgcagggacagtaa
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