Labrus mixtus (cuckoo wrasse): 132985100
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Entry
132985100 CDS
T10666
Symbol
ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Brite
Enzymes [BR:
lmix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132985100 (ddx1)
Spliceosome [BR:
lmix03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
132985100 (ddx1)
Transfer RNA biogenesis [BR:
lmix03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
132985100 (ddx1)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132985100
NCBI-ProteinID:
XP_060908261
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Position
12:complement(15944851..15952502)
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AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGRASVKTGGAIFNNWQMNPYDRSTAFAIGPDGLCCQSREFKEWH
GCRSTKGVTKGKYCYEVTCHDQGLCRIGWSTSQAALDLGTDKYGFGFGGTGKKSNNKQFD
SYGEEFTMHDTIGCYLDLEKDQMSFSKNGNDLGVAFDIPQHVKNQPFFASCVLKNAELKF
NFGGEAFKHPPKTGFVALDQAPEGHAVKSSQTGSAKVTQVKAASNAPKALIIEPSKELAE
QTLNVVKQFRKFVDNPKLRDLLVIGGVAAKDQLAALEQGIDIVVGTPGRLDDLISTGKLS
LSQIRFLVLDECDGLLSAGYTDFINRIHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE
RIMHFPTWVDLKGEDSVPETVHHVVVPVNPKSDRLWERLGKNHIRTDEVHAKDNTRPGAN
SSEMWSEAIKLLKGEYIVRAIKEHKMDQAIVFCRTKIDCDNMEQYFIQQGGGPDSKDHQL
SCVCLHGDRKPNERKTNLERFKRKEVRLLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAMEKEKVWYHVCPNRGRGCYNTRLKEDGGCTIWYNEKELLS
DIEEHLKCTITQCEPDIKVPVDDFDGKVSYGQRKALGGGNYKGHVDVLAPTVKELASLER
EAQSSFLHLGYMPNQLFRAF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgttttctgaaatgggggttatgcctgaaattgcgcaggccgtggaggagatg
gactggctgttgccaacagacatccaggcagagtctattccccttattcttggtggagga
gatgttctcatggcagcagaaactggcagtggcaaaacaggagccttcagtattccagtc
atccagattgtgtatgagaccctgaaggaccagcaggagggcaaaaagggaagagcctcc
gtcaagactggtggagctattttcaacaactggcagatgaatccttatgatcgcagcaca
gcctttgcaatcggtccagatggcctgtgctgccagagcagagagtttaaagagtggcat
ggctgtcgatctacaaaaggtgtcaccaaaggaaagtactgctatgaggttacctgccat
gaccagggactgtgtcgcattggctggtccaccagtcaggcagcgctggacttgggaact
gataagtatggattcggttttggtgggactggaaaaaaatccaacaacaagcagtttgac
agctatggagaggagttcactatgcatgacaccattggatgctacctggatctcgaaaag
gaccagatgtccttctctaaaaatggtaatgacctgggtgtggcgtttgacatccctcaa
catgtgaagaatcaacctttctttgcttcctgtgtgctgaagaatgcagagctgaagttt
aactttggaggagaagcgtttaaacatcccccaaagactggatttgttgctctggatcag
gcacccgagggacacgcagttaaatcttctcagacaggcagcgccaaagtgactcaggtg
aaagctgcatccaacgcacccaaagctctgatcatcgagccatccaaagaactggctgag
caaaccctcaacgttgtcaagcagttcaggaaatttgttgataaccccaaactgagggac
ctactggtgattggtggtgtggctgccaaagatcagttggctgctctggagcaggggatt
gacatagttgtgggaacacccggcagactggacgatctcatctccactgggaaactaagc
ctgtcccaaatccgctttctagtcctggatgagtgtgacggcctgctgtctgcaggttat
actgacttcataaacaggatccataaccaaatccctcaagtcacctctgacggcaaaaga
ctgcaggtgattgtttgttctgccactctgcattcatttgatgtgaagaagctgtccgag
cgaatcatgcactttcccacttgggtggacctgaagggggaggactctgtccctgaaaca
gtccaccatgtggtagtgcctgttaatccaaaaagcgaccgcctctgggagcgattgggc
aagaaccacatccggactgatgaagtccatgccaaagataacaccagacctggagccaat
tcttctgagatgtggtcagaagccatcaagctgctgaagggcgagtacatagtgagggcc
atcaaagagcacaagatggaccaggccatcgtcttctgtcgcaccaagatcgactgtgac
aacatggaacagtacttcattcagcaaggaggaggtccagacagtaaagaccaccagttg
tcctgtgtttgtctccatggtgatcgcaagccaaatgagcggaagactaacctggagcgt
ttcaagaggaaagaagtgaggctcctgatctgcacagatgtagctgccagaggaattgat
atccacggagttccttatgtcatcaacgtcacactgcctgatgagaagcaaaactacgtc
catcgtatcggaagagttggcagagcagagagaatgggactggccatctccctggttgct
atggagaaggagaaggtttggtaccatgtttgcccaaacagaggcaggggctgctacaac
acccggctgaaggaggacggcggttgcaccatctggtacaacgaaaaagagctcttatca
gatattgaggagcatctcaagtgcaccatcacccagtgtgaacccgacatcaaagtacct
gtggatgatttcgacggaaaggtctcttatggtcagcgcaaagcattgggaggtggtaac
tacaaggggcatgtggatgttctggccccaacagtcaaggagctggcgagcctcgagaga
gaagcccagagttccttcctccacctgggttacatgccaaaccagcttttcagagccttc
taa
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