Labrus mixtus (cuckoo wrasse): 132985156
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Entry
132985156 CDS
T10666
Symbol
vps18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04140
Autophagy - animal
lmix04142
Lysosome biogenesis
lmix04145
Phagocytosis
lmix04148
Efferocytosis
lmix05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
132985156 (vps18)
04142 Lysosome biogenesis
132985156 (vps18)
04140 Autophagy - animal
132985156 (vps18)
04148 Efferocytosis
132985156 (vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
132985156 (vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmix04131
]
132985156 (vps18)
Membrane trafficking [BR:
lmix04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
132985156 (vps18)
Hops complex
132985156 (vps18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-C3HC4_2
aq_1631
zf-RING_11
zf-RING_16
zf_RING_Vps8
zf-RING_2
Apolipoprotein
zf-RING_UBOX
zf-ANAPC11
zf-RING_Vps41
DUF5600
DUF2175
DUF1664
RBSN_mid
zf-rbx1
zf-C3H2C3
Ead_Ea22
KNOX2
zf-RING_5
DUF4446
LETM1_C
Sec8_N
zf-C4H2
Motif
Other DBs
NCBI-GeneID:
132985156
NCBI-ProteinID:
XP_060908362
LinkDB
All DBs
Position
12:complement(17158637..17164032)
Genome browser
AA seq
982 aa
AA seq
DB search
MASILDEYEDSQNTRQSAQQRSRLSSANIGLTHSGFVNVRLEEEKPIFNKQRIDFTPPEK
INHLAVCNNQLCMSLGKDTLLRIDLAKPDQPNQTDLGRKDESKVHKLFLDPTGSHLLISL
STSECLYLNRNTQKVRSLSRWRGHLIESIGWNKLLGNETNTGPILVGTSQGIIFEAEIST
TEGSLFNTNPDQFFRQVHSLEEDGKPAPVCCLEVERGLENKYFIIATTRKRLFQFVGKVA
EGSEQQGFSSIFSQNQDLLPSFQEFPANMGYSEITFYTSKLRNSPKAFAWMMGNGVLYGQ
LDYVRPDSLLSDVQVWEYTPDIDLSVNKPISIVLTQFHFLLLLHDRVKAICTLNGQVVYE
DVFPDKFGTLKRMIKDPIGGLVWIYTERAVFRYHVQREARDVWQMYMSMSKFDLAKEYCR
DRPECMDMVLAKEAEHCFQNKRYIESAKCYALTQNYFEEIALKFIEAKQEEALKEFLLKK
LNNLKQGERTQITLLVTWLAELYLNRLGQLESDGNSLVFQETREEFRNFLSNSKHKECLY
NNRSTIYDLLASHGNVDDMVYFSVVMQDYERVISHYCQHDDYSAALEVLSKHCDQKLFYK
FSPVLMQHIPKKVVDAWIQMGKRLDPKKLIPALMNYSQMGSTQQINETIRYMEFCVYELT
VTEEAIHNYLLSLYAKYKSDSLLWYLEQAGTHASEIHYDLKYALRLCAEHGYLRACVLVY
RIMELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMNCL
SSCNLLKIEDILPFFPDFVTIDHFKEAICSSLEEYNQHIEELKQEMEEATESAKRIREDI
QEMRNKYGVVDSQEKCAACDFPLLNRPFYLFLCGHMFHYDCLFQEVTPHLSVYKQSRLED
LQKKLASTTQSSKSRLRTVTKDEGDTSSLGKGNAGTSREQIKSDIDDIIASECVYCGDLM
IKTIDKPFIDPQKFEEEKSSWL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaattcttgacgagtatgaggactcgcaaaacaccaggcaaagtgcgcagcag
cgtagccgcttgtcttctgcaaacatcggcttaactcattcaggttttgtaaatgtgaga
ctggaggaagagaagccgatattcaacaagcagaggatcgatttcaccccccctgagaag
ataaaccatctcgcagtctgcaacaatcagctgtgcatgagtctgggaaaggacactctg
ctgaggattgacttggccaagcctgatcagcccaatcagactgacttaggaaggaaagat
gaaagcaaagtgcacaaactgttcctggaccccactggctcccatctgctgatcagcttg
agcaccagcgagtgtctgtacctcaacaggaacacccagaaagtgcgcagtctgtcccgc
tggagaggccacctcatcgaaagcatcggctggaacaagctgctgggaaacgagaccaac
acaggacccattctggttggcaccagccagggcatcatctttgaggcggagatctctaca
actgagggcagccttttcaacaccaatccagatcagttcttcagacaggtccactccctg
gaggaggatgggaaacctgcaccagtctgctgcctggaggtggagcggggcctggagaac
aagtacttcatcattgccaccacccgcaaacgcctgttccagttcgtggggaaggtggct
gaggggtccgagcagcagggcttcagctccatcttcagccagaaccaggacctcctgccc
agtttccaggaattccccgccaacatgggctacagtgagatcaccttctacacatcgaaa
ctcagaaactcccccaaggcttttgcctggatgatgggaaatggagttctttatggtcag
ctggactatgtcaggcctgattccctgttgagtgatgtgcaggtatgggagtacaccccg
gacattgatctaagtgtcaacaagcccatctccattgtgctgactcagttccacttcctg
ctgctgctccatgacagagtaaaggccatctgcaccctgaatggacaggtggtttatgag
gatgtgttcccagataaatttggcacccttaagagaatgatcaaagacccaattggcggc
ttggtgtggatttacaccgagcgggcggttttcaggtaccacgtccagcgcgaggccagg
gacgtgtggcagatgtacatgagcatgagtaaatttgatctggctaaggagtactgcaga
gaccggcctgagtgcatggacatggtgctggccaaggaggcagagcactgcttccaaaac
aaacgttacattgagagcgctaaatgctacgcactgactcagaactactttgaggagatc
gcgctcaagtttatcgaagccaaacaagaagaagccctgaaggagttcttgctgaagaag
ctgaataatttgaaacagggtgagagaacgcagatcaccctgctggtcacctggcttgcc
gagctctacctgaaccgactcggccagctggagagcgacggcaacagcctcgttttccag
gagacccgcgaggaatttcgcaacttcctgagcaactccaagcacaaagagtgcctgtac
aacaaccgcagcaccatctacgacctgctagccagccacggcaatgttgatgacatggtt
tacttctcagttgttatgcaggattacgagagagtaatatcccactactgccaacacgac
gactacagtgccgctctggaggtcctctctaagcattgtgatcaaaagcttttctacaag
ttctccccggtcctcatgcagcacattcccaaaaaagtggtggatgcatggattcaaatg
ggcaagcgactggacccaaagaagctaatcccggctctgatgaactacagccagatggga
agcacccagcagattaacgaaaccatccgctacatggagttctgtgtgtacgagctgaca
gtgacagaggaggccatacacaactacctgctgtctctttatgccaagtataagtcagac
tctttgctctggtatctggagcaggcaggaacacatgcctcagagatccactatgacctg
aagtatgccctcagactgtgtgcagaacatggctacctccgggcctgtgtcctggtttat
agaattatggagctgtacgaggaggcggtggatcttgctttacaagtggatgtagacttg
gccaagtcctgtgcagacctgcctgaggacgatgaggagctgaggaaaaagctttggctt
aaaattgctcggcatgtggtgcaggaggagaaagatgtgaagaaagccatgaactgtctg
tccagctgcaatctgctcaaaattgaagacatcctgcccttcttcccagactttgtcacc
atagaccattttaaggaggctatctgcagctccctggaggagtacaatcagcacatcgag
gagctgaagcaggaaatggaggaggccacagaaagcgctaaacgtattagagaagacatt
caggaaatgaggaacaaatatggtgttgtggattcccaagaaaagtgtgctgcttgtgac
ttcccattactcaacaggcccttctatctattcctgtgtggccatatgttccactatgac
tgcctcttccaggaagtgacccctcatctgtcggtttataagcaaagtcgtctggaagac
ctgcagaaaaagctggcttcaaccacacaatcctccaagtcacgcctccgcacagtgacg
aaggacgaaggagacacctccagtcttggaaaaggcaatgcaggcacaagccgtgagcag
atcaaatctgacatcgatgacatcattgcgtcagaatgcgtttactgcggcgatctgatg
atcaagaccatcgacaaaccttttattgatccacagaagtttgaggaggagaaatccagc
tggttatga
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