KEGG   Labrus mixtus (cuckoo wrasse): 132985339
Entry
132985339         CDS       T10666                                 
Name
(RefSeq) histone deacetylase 2
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
lmix  Labrus mixtus (cuckoo wrasse)
Pathway
lmix03082  ATP-dependent chromatin remodeling
lmix03083  Polycomb repressive complex
lmix04110  Cell cycle
lmix04330  Notch signaling pathway
lmix04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:lmix00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    132985339
   03083 Polycomb repressive complex
    132985339
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    132985339
   04350 TGF-beta signaling pathway
    132985339
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    132985339
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lmix03036]
    132985339
Enzymes [BR:lmix01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     132985339
Chromosome and associated proteins [BR:lmix03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     132985339
   HDAC complexes
    Sin3A-HDAC complex
     132985339
    BRAF-HDAC complex
     132985339
    REST complex
     132985339
    SHIP complex
     132985339
    MiDAC complex
     132985339
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     132985339
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    132985339
  Chromatin remodeling factors
   NuRD complex
    132985339
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 132985339
NCBI-ProteinID: XP_060908667
LinkDB
Position
12:25133514..25141773
AA seq 489 aa
MAYTTAGGTKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHK
ATAEEMTKYHSDDYIKFLRSIRPDNMSEFSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSA
AGSVKLNRQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIH
HGDGVEEAFYTTDRVMSVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYE
QIFKPVMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIRGHAKCVEYMKSFNLPLLML
GGGGYTIRNVARCWTYETAVALDTDIPDELPYNDYFEYFGPDFKLHISPSNMTNQNTQEY
MDKIKQRLFENLRMLPHAPGVQMQAIPEDAIPDDTVDEDTEDPDKRLSIRATDKRIACDE
EFSDSEDEGEGGRRNVANHKKGVKRPRVDEEKKEGEEKKPEIKEEEKTKDNNAEKTDLKS
VKTEQTSSA
NT seq 1470 nt   +upstreamnt  +downstreamnt
atggcctacacgaccgcgggtggcaccaagaagaaggtctgctactactacgacggtgac
atcggaaattactactatggacaaggacatcccatgaaaccacatcgtatcaggatgact
cacaacctgctgctgaactatggactctacaggaaaatggagatctatagaccacacaaa
gccactgcagaggagatgaccaaataccacagtgatgactacatcaagtttctgcgatca
atccggccagacaacatgtccgagttcagcaagcagatgcagcgcttcaacgttggagag
gactgtcccgtgttcgatggcttgtttgagttctgccagctctccgctggtggatctgct
gctggctcggtgaaattaaaccgacagcagacggatatcgccgtgaactgggctggagga
cttcaccatgccaagaagtctgaagcctctggattctgctatgtcaacgacatcgtgctc
gccatcctggagctgcttaagtaccaccagagggtgctgtacatcgacatagatatccac
cacggagacggagtagaggaggccttctacaccacagaccgggtcatgtctgtgtccttc
cataaatacggagagtacttccctggaaccggagacctcagggatatcggagctggtaaa
ggcaaatattacgccgtcaacttcccgctgcgtgacggcatcgatgacgagtcatacgag
caaatcttcaaacctgtgatggccaaggtgatggagatgtaccagcccagcgccgtggtc
cttcagtgcggcgcagactctctgtcaggagaccgcctcggctgcttcaacctcaccatc
cgcggccacgccaagtgtgtggagtacatgaagtccttcaacctcccgctgctcatgctg
ggtggaggaggatacaccatccgcaacgtggcccgctgctggacctatgagaccgctgta
gctctggacacagacatccctgatgagctgccgtacaacgactactttgagtacttcggg
cccgacttcaagctacacatcagcccctccaatatgaccaaccagaacacgcaggagtac
atggacaagatcaagcagcgactgtttgagaacctgcggatgctgcctcacgctcccgga
gtgcagatgcaggcgatccctgaggacgccatcccagacgacactgtggacgaggacacg
gaggatcctgacaaacgcctgtccatccgcgctacagataagaggatcgcctgtgacgag
gagttttctgactctgaggacgagggtgagggaggcaggaggaatgtggccaatcacaag
aagggagtgaagcggccccgagtggatgaagagaagaaggaaggagaggagaagaagccc
gaaatcaaagaggaggagaagacaaaggacaacaacgctgagaagacggacttaaaaagt
gtgaagacggagcagacgagcagtgcctga

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