KEGG   Labrus mixtus (cuckoo wrasse): 132986722
Entry
132986722         CDS       T10666                                 
Symbol
sox1a
Name
(RefSeq) transcription factor Sox-1a
  KO
K09267  transcription factor SOX1/3/14/21 (SOX group B)
Organism
lmix  Labrus mixtus (cuckoo wrasse)
Brite
KEGG Orthology (KO) [BR:lmix00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lmix03000]
    132986722 (sox1a)
Transcription factors [BR:lmix03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    132986722 (sox1a)
SSDB
Motif
Pfam: SOXp HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 132986722
NCBI-ProteinID: XP_060909302
LinkDB
Position
13:complement(5521202..5536785)
AA seq 286 aa
MYSMMMETDLHSPGPQTNTTTGQTGPNSGSKANQERVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLSGPSGGGGVGLGVGMSSSGVGQRLESPGGHGGSSSGYSHMNGWANGAYSGQV
AAAAAAAAMMQEAQLAYSQHPGSGAHHHHHSHHHHSHNPQPMHRYDMTALQYSPISNSQS
YMNASPSGYGGITYTQHQGSGVSSSAAMGTLGSLVKSEPSISPLLE
NT seq 861 nt   +upstreamnt  +downstreamnt
atgtatagcatgatgatggaaactgacctccattcccctggcccccaaacgaacactacc
acggggcaaacgggtccgaacagcgggtccaaagcgaaccaggaacgggtgaagagaccg
atgaacgcgttcatggtttggtcccgcgggcagcggaggaagatggcacaggagaacccc
aaaatgcacaactctgagatcagcaagcggctgggcgccgagtggaaggtgatgtccgag
gctgagaagcgccctttcatcgacgaggcgaaacggttgcgcgccatgcacatgaaggag
catccggattacaagtaccggcccagacggaagaccaagacgctgctgaaaaaggacaaa
tattctcttgccggcggactgctttctgggcccagtgggggcggtggagttggtttaggg
gtcggaatgagttcatcgggggtcgggcagaggttagagagccccgggggtcacggaggc
tccagctccggctactcgcacatgaacggctgggcgaacggtgcgtactcgggacaggtg
gctgctgccgcggcggccgcagcgatgatgcaggaggcgcagctcgcctacagccagcac
ccgggcagcggggcgcaccaccaccaccactcacaccaccaccactcacacaacccgcag
cctatgcaccgctacgacatgacggcgctgcagtacagccccatctcgaactctcagagc
tacatgaacgcttctccatccggttacggcgggatcacctacacgcagcaccagggctcc
ggcgtctcctcctcggctgccatggggacgttagggtcgctggtgaagtcggagccgagt
atttctccgttgttggaataa

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