Labrus mixtus (cuckoo wrasse): 132986809 Help Entry 132986809         CDS       T10666                                  Symbol col4a1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism lmix  Labrus mixtus (cuckoo wrasse) Pathway lmix04382   Cornified envelope formation lmix04510   Focal adhesion lmix04512   ECM-receptor interaction lmix04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:lmix00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     132986809 (col4a1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     132986809 (col4a1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     132986809 (col4a1)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     132986809 (col4a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:lmix04147]     132986809 (col4a1)    00536 Glycosaminoglycan binding proteins [BR:lmix00536]     132986809 (col4a1) Exosome [BR:lmix04147]  Exosomal proteins   Exosomal proteins of other cancer cells    132986809 (col4a1) Glycosaminoglycan binding proteins [BR:lmix00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    132986809 (col4a1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  132986809 NCBI-ProteinID:  XP_060909437 LinkDB All DBs Position 13:6926658..6973278 Genome browser AA seq 1638 aa AA seqDB search MMLPCGALLLLAALHCTIDLTEAEGCGASCGKCDCSGVKGAKGERGFPGLQGNMGFPGMQ GPEGPPGGMGFKGDLGEPGATGIKGVRGPPGLPGFPGNPGLPGINGNDGPPGLPGIPGCN GTKGDRGRDGIPGFSGIQGPPGIPGVPGLKGDPGGVIGIVPLKGDRGFPGTPGLPGSNGL PGPTGPPGTRGYQGPKGDAGLPGPPGEKGDKLAFVSEKGDKGDRGFRGPPGPPGRPQEFE VGPTEYMPGLQGEKGPQGDKGEQGQCKPGQTGIKGEIGPPGPPGKSGKDGEDGLKGEKGF SGSPGYSGSPGEKGERGPPGYGGGAPGPAGSRGLPGLQGEKGFPGPQGEAGPPGRHIEGP RGETGQKGSTGEKGDRGVEGESLAGPPGQPGASGPAGPPGQLTEDTCDIPKGAPGPPGPP GLQGELGQKGDIGDTCVQCESNGPPGLPGPQGPKGDQGPPGHFGGKGEKGQSGSPGTPGR PGSHGTPGLMGAPGAVGAPGDIFVAPGLKGDKGLPGLSGSPGRSGLDGQPGRDGPPGFPG LKGEPAKEGVRGERGFPGDPGQAGHPGESGPPGLPGFGRAGESGEKGSHGRPGLPGAPGV PGIKGEPGQGGSTPGPHGEPGAKGEIGRSGIQGESGQTGDPGLPGFPGQKGDNGAPGIGF PGPSGAKGISGTPGARGLPGEAGRPGQDGFTGQSGSPGQKGEPGRGLPGPKGLQGQPGIT GYSGEKGTIGLPGVPGQEGQTGPPGAQGIKGDSGPPGLPGLVGSPGAPGKGSSGAPGPQG PPGEPGPFGQEGVKGEKGYPGPPGLDMPGPQGEKGTQGFPGGPGSKGLPGSPGFPGRDGL IGNQGPKGEMGVIGTPGVQGFPGPAGTPGSPGIRGDPGNTGLRGVNGEPGPKGERGEQGI PGPPGKMSVGEMENMKGEKGDLGDRGDPGHTGLKGHRGLSGDPGMPGKDGEPGSPGQPGE KGDSGFPGETGSMGPTGQKGGVGEMGIPGPYGPKGTKGDSGKPGHPGFRGTDGQKGDTGA AGEPGIGLPGFPGEKGQPGLSGGPGSPGEKGLRGQEGMPGKPGLQGSQGEKGSSGFPGQP GRPGEKGTPGLPGSAGEPGRDGQPGEGGLQGPSGPTGEKGEAGVDGIPGSSGERGDPGVP GHGFPGPPGVLGSKGDKGNPGFPGTPGHPGIPGIKGDKGLAGSLGPQGETGETGFPGNSL DGPKGDRGETGQPGEAGSTGAPGPSGVPGRDGLKGEKGNPGNLGLQGETGHKGEPGAPGL LGQSGLPGIDGQKGDKGLHGVHGFPGTKGNDGDIGFKGDYGDRGFPGVKGNDGPPGPPGP HTFIKGDIGFPGIQGLPGPQGPSGFPGQKGQQGLTGVPGLKGDDGLPGYNGQPGAKGESG LPGPQGPRGHPGPPGPDGVPGHVGPPGPSSMEHGFLVTRHSQSVEVPYCPEGTSLLYDGY SLLYIQGNERAHGQDLGTAGSCLRKFSPMPFLFCNINNVCNFASRNDYSYWLTSPQPMPM SMAPITGESIKPFISRCSVCEAPAMVIAVHSQTIMIPSCPQGWDSLWIGYSFVMHTSAGA EGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATIEDSEMFTKPIPTTLK AGDLRTHISRCQVCMKRT NT seq 4917 nt NT seq  +upstreamnt  +downstreamnt atgatgttaccgtgcggcgcactgttactgctggcggctcttcactgcaccatcgacctg acagaggctgagggttgcggggcatcttgtggaaaatgtgactgcagtggtgttaaagga gcaaagggtgagcgtgggtttcctggtcttcaaggaaatatgggattcccagggatgcag ggacctgaggggcctcctggggggatgggcttcaagggggacctgggtgaacctggggcc acggggataaaaggagtgcggggtcctccaggtctgccaggttttccaggaaacccagga ctgccaggtatcaatggaaacgatggcccaccaggtctaccaggaatcccaggatgcaat gggactaaaggagacagaggaagagatggtattccaggtttttctgggattcaaggacct cctggcatccctggagttcctggattgaagggtgaccctggtggagtgatcgggattgtt cctctcaaaggagacagaggcttccctggcacacctggattacctggatcaaatggactt cctggaccaactggaccaccggggactcgtggctatcaaggacccaaaggtgatgctggc ctccccggccctcctggagagaagggtgacaagttagcctttgtgagtgaaaagggagac aagggcgacagagggtttcgaggaccccctggcccacctggacgcccacaggaattcgaa gtaggccccacagagtacatgcctggactacagggagaaaaaggacctcaaggagataaa ggagaacagggtcaatgtaagccaggtcagactgggattaaaggtgaaatcgggccacct ggaccaccgggtaaatctggaaaggatggagaagatgggctaaagggagaaaagggcttt tctgggtctcctggctattctggttccccgggtgaaaaaggagaaagaggaccaccaggt tatgggggtggtgcacccggccctgctggttctcgtggtctcccggggttacaaggagaa aaaggttttcctggtcctcagggagaagccggcccaccaggccgccacatcgaggggcct cgaggagagacgggtcagaagggaagcacaggagagaaaggagacaggggcgtagaggga gagtctcttgccggacctccaggtcaacctggggcctctggacctgctggacccccggga caactgactgaggatacatgtgacatcccgaaaggagctcctggcccccctggacctcca gggctacagggggaactgggacagaaaggtgacataggagatacctgtgttcaatgtgaa agcaacggcccccctggactacctggcccccagggtcctaaaggagatcaagggcctcct gggcatttcggcggcaagggagagaagggtcaatctggttcacctggaacacctggaaga cctggttctcatggcactcctgggttgatgggagctccaggtgctgtcggtgcgccgggg gacatttttgtagctcccggtctgaagggggacaaaggtctgcctggtctttctggctca ccaggaaggtcaggactggatggacagccagggagggacggccccccgggtttccctggc cttaaaggagaacctgccaaagagggtgtcaggggtgagcgtggatttcctggggacccc ggtcaagctgggcacccaggagagagcggtccacctggactgccaggctttggccgagca ggagagtccggggagaagggcagtcacggcagaccaggcctccctggagctccaggagta cccggtataaaaggggagccaggccaaggtggtagcacccctggacctcatggagaacca ggagctaaaggagaaattggcagatctggaattcaaggtgaaagtggccagactggagat ccagggctgccaggtttcccaggtcaaaaaggtgacaatggagcccctggtattggattt cctggcccatctggtgccaaaggaatcagtggaaccccgggagctcgaggattaccagga gaggcaggaagaccaggacaggatggcttcactggacaatccggttcccctggacaaaaa ggtgaaccaggtcgaggtcttccaggcccaaaaggacttcaaggccaaccaggaattact ggctactcaggtgagaagggaaccattggattacctggtgttcctgggcaagaaggccag acgggacctccaggtgctcagggaatcaaaggtgactcgggaccaccggggctacctgga ctggttggctcaccaggtgctccaggaaagggctcctctggagctcccggaccacaagga ccacctggagagcctggaccatttggtcaggagggtgtgaaaggagaaaaggggtaccca ggtcctcctggtctggacatgccagggcctcagggagagaaggggacccaagggttccct ggagggccaggatctaaaggactaccggggtcaccaggtttcccaggcagagacggactg attggaaaccaaggtcccaaaggtgaaatgggagtcatcggcactccaggagtacaagga ttcccaggaccagctggtacacctggatcccctggtataagaggtgaccctggtaatact ggtctaagaggggtcaatggagagcctggacctaagggagaaaggggagagcaaggtatt ccgggtcctcctgggaaaatgtcagtgggtgagatggaaaacatgaaaggggaaaaggga gaccttggagacagaggtgatcctggacacacagggctgaagggccaccgcggacttagt ggagaccctggaatgccaggcaaagatggagaacctggatcacctggacaaccaggtgag aaaggagactctggttttcctggagagaccggtagtatgggaccaactggacagaaaggt ggtgtaggagagatgggaataccgggtccttatggtccaaagggtactaaaggagacagt ggaaaacctggacatcctggattcagaggcacagatggacaaaagggagacacgggagca gctggtgagccaggtattgggctcccaggatttccaggagaaaagggtcaaccaggcctg tctggaggcccaggatcacctggagagaagggtctgaggggtcaggagggaatgcctgga aagcccggactgcaaggatcccaaggagagaagggaagcagcgggtttccaggtcagcca ggtagaccaggggagaagggtacacctgggctaccagggtctgcaggagaacctggacgt gacggtcaacctggtgaaggaggtctgcagggaccttctggtcctaccggagagaaggga gaagctggagttgacggtatacctggatcctcaggggagagaggagacccaggtgtacct ggtcatggtttccctgggccccctggtgttcttggtagcaaaggtgacaaaggcaatcct ggcttccctggaactccaggtcatccgggcatcccaggtatcaaaggcgacaagggactt gcaggctcactgggaccccagggtgagacaggagagacgggtttcccaggtaactctcta gatggtccaaagggagacaggggagaaacaggacaaccaggagaagcaggttccacagga gcaccagggccctctggtgtgccaggcagagatggcctaaaaggagagaaaggaaacccg ggtaaccttggcctccagggagagacgggacataagggtgaaccgggagctcctggactt cttggacaatctgggctaccaggtatcgatggacaaaagggtgacaagggattgcatggt gtccatggcttcccaggtacaaaaggtaatgatggtgacattggattcaaaggggattat ggagacagaggattcccaggagtaaagggcaatgatggcccccctggaccccctggacca cacaccttcatcaaaggggatattgggttcccaggaattcaaggcttaccaggaccccaa ggaccttctgggttccccgggcagaaaggacagcaaggtttgacaggagtcccaggcctg aaaggtgacgatggacttcctgggtataacggtcagcctggagccaaaggagagtctggt ttgccaggaccacagggacccagaggacaccctggccccccaggacctgatggtgttcca ggtcatgtgggtccccctggcccctcctccatggaacacggtttcctggtaacccgtcac agtcaatcagtggaggttccatattgtcctgagggaacctcgctcttatatgatggctac tccttgctctacatacaaggcaatgagcgtgctcatggacaggacttaggtacggcaggc agctgtctaaggaagttcagccccatgccattcctcttctgtaacatcaacaacgtgtgc aactttgcctcccgtaatgactactcctactggcttacctcccctcagcccatgcccatg agtatggctcccataactggggaaagcatcaaacccttcatcagcagatgttctgtgtgt gaagccccagccatggtgatcgcagttcatagtcagactatcatgatcccatcatgccct caaggctgggactctctgtggattggatactcctttgtcatgcacaccagtgcaggtgct gagggttcgggtcaggctctggcctctcctggttcctgcctggaggagttccgcagtgct ccgttcattgagtgtcatggtcgtggaacctgcaactactatgccaactcctacagcttt tggctcgccactattgaagacagtgagatgttcacgaaacctatcccaacaacactaaaa gcgggagatcttcgaacacacataagccgctgtcaagtgtgtatgaagaggacataa

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