Labrus mixtus (cuckoo wrasse): 132986821
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Entry
132986821 CDS
T10666
Symbol
si:ch211-214p13.3
Name
(RefSeq) nectin-4
KO
K06081
poliovirus receptor-related protein 1
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03266
Virion - Herpesvirus
lmix04514
Cell adhesion molecule (CAM) interaction
lmix04517
IgSF CAM signaling
lmix04520
Adherens junction
lmix05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
132986821 (si:ch211-214p13.3)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
132986821 (si:ch211-214p13.3)
04517 IgSF CAM signaling
132986821 (si:ch211-214p13.3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
132986821 (si:ch211-214p13.3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132986821 (si:ch211-214p13.3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lmix04515
]
132986821 (si:ch211-214p13.3)
04090 CD molecules [BR:
lmix04090
]
132986821 (si:ch211-214p13.3)
Cell adhesion molecules [BR:
lmix04515
]
Immunoglobulin superfamily
Nectin family
132986821 (si:ch211-214p13.3)
CD molecules [BR:
lmix04090
]
Proteins
132986821 (si:ch211-214p13.3)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
V-set
ig
C2-set_2
Ig_2
C2-set_3
LST1
Motif
Other DBs
NCBI-GeneID:
132986821
NCBI-ProteinID:
XP_060909451
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All DBs
Position
13:7599326..7614060
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AA seq
411 aa
AA seq
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MDGWILFESSRRKLWIGLCLGFRSTTMLLLVLTLMVTTVTNALEVIGGRTTTVQGGAAVL
PCKLIDTTETLTQISWQRLTRGKPRTDNFYTISSGGPNYINGHDYRFEYIGSFTDKNGTL
LLSNVTLMDEGTYTCMFTLFPSGIHETAIPLKVHVPPVTSLKDAHPALGNDEVPLITCTA
AGSKPPAEVRWLTGTLGEKVRPSTNSNLHANGTTTTVSWLFGAPTRELDDRSVQCVITSP
ALEREETLTSTIHIHSPPLEVKITERPAHSFECLTEAYPAASFTWTRSEQSWPQSGVRVD
GSTLQFLSITSELNGLYQCEASNLYGSKRAYLRVHFTSGSSAASWTLFVLLLVLVVAAVF
CCFYKRMEIARFILREEGGTRGKMQKVPTTSSSPDGHDRVEEEGGETEGPL
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggatggatggatattatttgaatcatctcgacgtaaactatggataggcctgtgtttg
ggtttcaggagcaccactatgcttttactggtgttaacgttgatggttaccacagttaca
aacgctctggaggtcattggaggaagaacgacaacggtgcagggaggagcagctgtcctc
ccctgtaaactcattgataccacagagaccctcacacagatttcatggcagagattgacc
agaggaaaacctcggacggacaatttctatacaatctcgtccggcggaccgaactatatc
aatggccatgattatcggtttgagtatattgggagttttacagacaaaaatggtactctc
ctgttatcgaatgtcacactgatggatgaaggcacctacacatgtatgttcactttgttc
cccagcgggatccacgagacagcgatacctcttaaagttcatgtgcctccggtcacaagc
ctgaaggatgctcatcctgctttgggtaacgacgaggtgcctcttattacctgcacggct
gctggttccaaacctcctgcagaggtgaggtggctcactggtactctgggagagaaagtg
aggccgtcaaccaactccaaccttcatgctaatggtacgactaccacagtcagctggctg
tttggagcgcctaccagagaactcgacgatcgttcagtccagtgtgtcatcaccagtcct
gctctagagagagaagaaaccctgacctccaccatacatatccactctcctcctctggaa
gtgaagatcactgaaaggccggcacactcctttgaatgtctcacagaggcctatccagct
gcaagctttacttggacaagatctgagcagtcgtggcctcagtccggggtccgagttgac
ggttcaacgctgcagtttctgagcatcacctccgagctgaacggcctctaccagtgcgag
gcgtcgaacctttacgggagtaaacgtgcttacctccgtgtgcatttcacctcaggatcc
agcgctgccagttggaccctctttgttcttctgctcgtcctcgttgttgctgctgtcttc
tgttgcttttataaacgtatggaaattgcaagatttatactacgggaagaaggcggcaca
cgaggcaagatgcaaaaggttccaacgacttccagctcacctgacggccatgacagagta
gaagaagagggaggggaaacagagggaccactttga
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