Labrus mixtus (cuckoo wrasse): 132986939
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Entry
132986939 CDS
T10666
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132986939 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmix03019
]
132986939 (hspd1)
03110 Chaperones and folding catalysts [BR:
lmix03110
]
132986939 (hspd1)
03029 Mitochondrial biogenesis [BR:
lmix03029
]
132986939 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lmix04147
]
132986939 (hspd1)
Enzymes [BR:
lmix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
132986939 (hspd1)
Messenger RNA biogenesis [BR:
lmix03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
132986939 (hspd1)
Chaperones and folding catalysts [BR:
lmix03110
]
Heat shock proteins
HSP60 / Chaperonin
132986939 (hspd1)
Mitochondrial biogenesis [BR:
lmix03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
132986939 (hspd1)
Exosome [BR:
lmix04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132986939 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
132986939 (hspd1)
Exosomal proteins of breast cancer cells
132986939 (hspd1)
Exosomal proteins of colorectal cancer cells
132986939 (hspd1)
Exosomal proteins of bladder cancer cells
132986939 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
132986939
NCBI-ProteinID:
XP_060909648
LinkDB
All DBs
Position
13:10905509..10914139
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AA seq
578 aa
AA seq
DB search
MFRLPTVMKQVRPVCRALAPHLTRGYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
NVIIEQSWGSPKVTKDGVTVAKSIDLKDKYMNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDTISKGANPVEIRRGVMMAVEHIINELKKLSKPVTTPEEIAQVATISANGDV
EIGTIISNAMKKVGRKGVITVKDGKTLHDELEIIEGMKFDRGYISPYFINTAKGQKVEFQ
DAYLLLSEKKISSVQSIVPALEIANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLRDMAVATGGTVFGEDTLGVALEDIQAHDFGKIGEVQITKDDTLLLKG
GGNPGDVEKRAAEIIEQLESTTSDYEKEKLNERLAKLSDGVAVLKIGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCIPSLDEIKAANSDQKIGVDIIRRALRIPAMTIA
KNAGVEGSLVVEKILQGSAELGYDAMLGEYVNMVEKGIIDPTKVVRTALLDAAGVASLLS
TAEAVVTEIPKEEKEMPGGGMGGMGGMGGMGGMGGMGF
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtctaccaacagtcatgaagcaggtgaggcctgtgtgccgggcgctggctcct
cacctcacacgaggctacgctaaggacgtgaagtttggagctgatgctcgcgctctcatg
ctgcagggagtcgacctgctggcggacgctgtggccgtcaccatgggtccaaagggtcgc
aacgtcatcatcgagcagagctggggcagcccgaaggtcaccaaggacggcgtgactgtg
gccaagagcatcgacctgaaggacaagtacatgaacatcggcgccaagctggtgcaggac
gtggccaacaacaccaacgaggaggccggagacggcaccaccaccgccaccgtgctcgct
cgggccatcgccaaggagggctttgacaccatcagcaaaggcgccaaccccgtggagatc
cgccgcggagtcatgatggctgtggaacacatcattaatgagctgaagaagctctccaag
cctgtcacaacccccgaggagatcgcacaggttgctacaatctcggccaatggagatgta
gagattggaaccatcatctccaacgccatgaagaaagtcggcaggaagggagtcatcaca
gtcaaggacgggaaaactctgcacgatgagctggagatcatcgagggcatgaagttcgac
cgcggttacatctccccttacttcatcaacaccgccaaaggtcagaaggtcgagttccag
gacgcctacctgctgctgagcgagaagaagatctccagcgtgcagagcatcgtgccggct
ctggagatcgccaaccagcaccgcaaaccgctggtgatcgtggctgaagatgtggacggg
gaggcgctcagcacgctcgtcctcaacaggctgaaggtcggtctgcaggtagtggctgtt
aaagctcccggctttggagacaacaggaagaaccagctgagggatatggccgtcgccacc
gggggcactgtgtttggagaggatactctgggcgtcgctctcgaggacatccaggctcac
gactttggtaaaatcggcgaggtgcagatcaccaaagacgacaccctgctgctgaaggga
ggaggaaaccccggcgatgtcgagaagcgtgcggcggagatcatcgagcagctggagagc
accacaagcgactacgagaaggagaaactcaacgagaggctcgccaagctgtcggacggc
gtcgctgttctcaagatcggaggaacgagtgacgtggaggtgaacgagaagaaggaccga
gtcacagacgctctgaacgccacacgagctgcagtggaggagggaatcgtacccggagga
ggctgcgctctgctgcgctgcatcccttcactcgacgagatcaaagctgcaaactcagac
cagaagatcggagtggacatcatcagacgggcactacggatcccggccatgaccatcgct
aagaatgccggcgtggagggctctctggtggtggagaagatcctgcagggatcggccgag
ctcggctacgacgccatgctgggagagtacgtcaacatggtggagaagggcatcatcgac
cccaccaaggtggtgaggacggccctcctcgacgccgcaggagtcgcctccctgctctcc
accgccgaggccgtcgtcacagagatccccaaggaggagaaggagatgcccggaggtggc
atgggaggaatgggcggcatgggcggcatgggcggcatgggaggaatgggtttctaa
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