KEGG   Labrus mixtus (cuckoo wrasse): 132986951
Entry
132986951         CDS       T10666                                 
Symbol
itgb5
Name
(RefSeq) integrin beta-5
  KO
K06588  integrin beta 5
Organism
lmix  Labrus mixtus (cuckoo wrasse)
Pathway
lmix04145  Phagosome
lmix04148  Efferocytosis
lmix04510  Focal adhesion
lmix04512  ECM-receptor interaction
lmix04518  Integrin signaling
lmix04810  Regulation of actin cytoskeleton
lmix04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lmix00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    132986951 (itgb5)
   04518 Integrin signaling
    132986951 (itgb5)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    132986951 (itgb5)
   04148 Efferocytosis
    132986951 (itgb5)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    132986951 (itgb5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    132986951 (itgb5)
   04810 Regulation of actin cytoskeleton
    132986951 (itgb5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lmix04131]
    132986951 (itgb5)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:lmix04515]
    132986951 (itgb5)
Membrane trafficking [BR:lmix04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    132986951 (itgb5)
Cell adhesion molecules [BR:lmix04515]
 Integrins
  Integrin beta subunits
   132986951 (itgb5)
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail EGF_integrin PSI_integrin Integrin_b_cyt I-EGF_1 EGF_2 vWA_SIBA-E EGF_Teneurin
Other DBs
NCBI-GeneID: 132986951
NCBI-ProteinID: XP_060909661
LinkDB
Position
13:11277481..11324119
AA seq 866 aa
MRSHGIINTPSSCFFLAQINRNTSDESAHCYVISPCQLQKKCNRSVPPPPPPTSALINTP
SDTMCSPGTWMWRAALCCALLETLLHTARGLNMCMSGSATSCEECLLIHPSCAWCAQEHF
GRGRTLTSRCDFKQNLHKRGCDPLFIEFPSSSVSILQNMPLSDKGSGATQYDVVQIMPQS
VSLSLRPGEQTWFGLQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLAQEMGKLTS
NFRLGFGSFVDKNMSPFSYTAPKYQENPCNGYKLFPNCVPTFGFRNILSLTDKVDRFNEE
VQKQMVSRNRDAPEGGFDAILQAAVCKTEIGWRKEAYHLLVFTTDDVPHLALDGRLGGLV
QPHDGKCHLNEKNEYSASTEMDYPSLALLGEKLAENNIFLIFAVTKRFYVIYKNFTALIP
GTTVEILDQDSKNVIQLIVAAYNNIRSKVELSVWDHPEDISLSFTATCQDGKPLPGLRKC
ADLKIGDTVSFNVSVEARSCPPRSTDQSFTIRPVGFKDRLEVSVDYQCDCDCSKKAQTNS
SICSSIGTYNCGKCQCEPGYLGARCECQEGETSSMYLSACREAEGKQICSGRGECSCNQC
LCFESEFGKIYGSYCECDDFSCARHKGILCSGHGECHCGECKCHAGFVGDNCNCSTETST
CVSDDGQMCSGRGNCVCGRCQCTEPGAFGDTCEKCPTCPDACGTKRECIECRLFNSGRLA
DNQTCQRLCKDEIITVETLKTEEPGAVLCLFKTDNDCVMKFTYSEHVSGQSILTALKEPE
CGGGTDAMMVLLAVVGSILLVGVILLAVWKTVITVHDRREFARFQSARSRARYEMASNPL
YKQPVSTHFVETDFSMYGKSYNGGVH
NT seq 2601 nt   +upstreamnt  +downstreamnt
atgcgctcacatggaataataaacacaccttcatcttgcttttttttggcacaaatcaac
aggaatacttccgatgagagcgctcattgttatgtaataagtccgtgtcagctgcagaag
aagtgcaacagatctgttccccccccccccccccccacgtcagcgttgataaacacgccg
agtgacaccatgtgcagcccggggacgtggatgtggagagccgctttgtgctgcgcgctt
ctggaaacattgctgcacactgccagaggtctcaacatgtgtatgagtggcagcgctaca
tcctgtgaagaatgcctcctgattcaccccagttgtgcctggtgcgcacaagagcacttt
gggaggggtcggactctgacatcgaggtgcgacttcaaacaaaacctgcataagagaggc
tgcgatccgctgttcatagagttccccagcagcagcgtttctatcctgcagaacatgccg
ctgagcgataaagggtccggggcgacccaatacgatgtggtccagattatgccccagagc
gtctctctcagcctgcggcccggagaacagacgtggttcgggctgcaggtacggcaggtg
gaggactacccagtggatctttactacctgatggacctgtctctgtccatgaaggacgat
ctggacaccatccgaaacctgggcaccaagctggctcaggagatgggcaaactcaccagc
aacttcagactgggctttggttcctttgtggacaaaaacatgtcgcccttctcctacaca
gcacccaagtatcaggagaacccctgcaatggatacaaactgtttcctaactgcgtcccc
accttcggtttccgtaacatcctctcgctgacggacaaggtcgaccgtttcaacgaggag
gtgcagaagcagatggtgtcccgcaacagggacgcacctgagggcgggtttgacgccatc
ctgcaggcagctgtttgtaagacggagatcgggtggagaaaggaggcgtaccacctgctg
gtgttcaccacagacgacgttcctcatctcgctctggacggtcggctgggaggcctcgtc
cagccgcacgatggaaagtgccacctgaacgagaagaacgagtacagcgcctccacagag
atggactatccgtctctggctcttctgggagagaaactggctgaaaacaacatctttctc
atctttgcagtgaccaaacgtttctatgtcatttataagaattttactgccctcataccg
gggaccacagtagaaatcctggaccaggactccaagaatgtgatccagctcatcgtcgca
gcgtacaataacatccgctccaaagtggagctgtcagtgtgggatcacccggaggacatc
agcctttccttcacagccacctgccaggatggaaaacccctgccgggcctcaggaagtgt
gccgacctgaagatcggagacacggtgtccttcaatgtgagcgtggaggcgaggagctgc
cctccccgcagcaccgaccagagcttcacgatcaggccggtgggcttcaaagaccgcctg
gaggtgtctgtggattatcagtgtgactgtgactgcagcaagaaagcccaaaccaacagc
agcatctgcagctccataggtacatataactgcgggaagtgtcagtgcgagccgggctac
ctgggtgcccgctgtgagtgccaggagggcgagaccagcagcatgtacctgagcgcctgc
agggaggccgagggcaagcagatctgcagcgggagaggagagtgcagctgcaaccagtgt
ctctgcttcgagtccgagttcgggaagatttacgggagctactgcgagtgtgacgacttc
tcctgcgccagacacaaaggaatcctctgctcaggtcacggagagtgtcactgcggggag
tgcaaatgccacgccgggttcgtcggagacaactgtaactgctccacggagacgtccacg
tgtgtctcggacgacgggcagatgtgcagcgggagaggaaactgtgtgtgtggacgctgt
cagtgcacagagcccggagccttcggagatacctgcgagaaatgccccacctgccccgac
gcctgcggcaccaaaagggagtgcatcgagtgtcggctcttcaactcaggacgcctcgca
gacaaccagacctgccagcgcctgtgcaaggacgaaatcatcacagtggagaccctcaaa
acggaggagcctggcgctgttctctgtctctttaagacggacaacgattgtgtcatgaag
ttcacgtattctgagcacgtcagcggacagtccatcctcacggcgctcaaagagccagag
tgtggaggtggtactgatgccatgatggtgctgctcgcggtggtcggcagcatcctgctg
gtgggagtcattctgctcgccgtctggaaaacggtcatcaccgtccacgaccggcgagag
tttgcacgcttccagagcgcacgatcacgagcccgatatgagatggcctccaacccgctg
tacaagcagcccgtctctactcactttgtggaaacggacttcagcatgtacgggaagtct
tacaacggaggggtccactga

DBGET integrated database retrieval system