Labrus mixtus (cuckoo wrasse): 132986951
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Entry
132986951 CDS
T10666
Symbol
itgb5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04145
Phagosome
lmix04148
Efferocytosis
lmix04510
Focal adhesion
lmix04512
ECM-receptor interaction
lmix04518
Integrin signaling
lmix04810
Regulation of actin cytoskeleton
lmix04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132986951 (itgb5)
04518 Integrin signaling
132986951 (itgb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
132986951 (itgb5)
04148 Efferocytosis
132986951 (itgb5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
132986951 (itgb5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
132986951 (itgb5)
04810 Regulation of actin cytoskeleton
132986951 (itgb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmix04131
]
132986951 (itgb5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lmix04515
]
132986951 (itgb5)
Membrane trafficking [BR:
lmix04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
132986951 (itgb5)
Cell adhesion molecules [BR:
lmix04515
]
Integrins
Integrin beta subunits
132986951 (itgb5)
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Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
EGF_integrin
PSI_integrin
Integrin_b_cyt
I-EGF_1
EGF_2
vWA_SIBA-E
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
132986951
NCBI-ProteinID:
XP_060909661
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Position
13:11277481..11324119
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AA seq
866 aa
AA seq
DB search
MRSHGIINTPSSCFFLAQINRNTSDESAHCYVISPCQLQKKCNRSVPPPPPPTSALINTP
SDTMCSPGTWMWRAALCCALLETLLHTARGLNMCMSGSATSCEECLLIHPSCAWCAQEHF
GRGRTLTSRCDFKQNLHKRGCDPLFIEFPSSSVSILQNMPLSDKGSGATQYDVVQIMPQS
VSLSLRPGEQTWFGLQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLAQEMGKLTS
NFRLGFGSFVDKNMSPFSYTAPKYQENPCNGYKLFPNCVPTFGFRNILSLTDKVDRFNEE
VQKQMVSRNRDAPEGGFDAILQAAVCKTEIGWRKEAYHLLVFTTDDVPHLALDGRLGGLV
QPHDGKCHLNEKNEYSASTEMDYPSLALLGEKLAENNIFLIFAVTKRFYVIYKNFTALIP
GTTVEILDQDSKNVIQLIVAAYNNIRSKVELSVWDHPEDISLSFTATCQDGKPLPGLRKC
ADLKIGDTVSFNVSVEARSCPPRSTDQSFTIRPVGFKDRLEVSVDYQCDCDCSKKAQTNS
SICSSIGTYNCGKCQCEPGYLGARCECQEGETSSMYLSACREAEGKQICSGRGECSCNQC
LCFESEFGKIYGSYCECDDFSCARHKGILCSGHGECHCGECKCHAGFVGDNCNCSTETST
CVSDDGQMCSGRGNCVCGRCQCTEPGAFGDTCEKCPTCPDACGTKRECIECRLFNSGRLA
DNQTCQRLCKDEIITVETLKTEEPGAVLCLFKTDNDCVMKFTYSEHVSGQSILTALKEPE
CGGGTDAMMVLLAVVGSILLVGVILLAVWKTVITVHDRREFARFQSARSRARYEMASNPL
YKQPVSTHFVETDFSMYGKSYNGGVH
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcacatggaataataaacacaccttcatcttgcttttttttggcacaaatcaac
aggaatacttccgatgagagcgctcattgttatgtaataagtccgtgtcagctgcagaag
aagtgcaacagatctgttccccccccccccccccccacgtcagcgttgataaacacgccg
agtgacaccatgtgcagcccggggacgtggatgtggagagccgctttgtgctgcgcgctt
ctggaaacattgctgcacactgccagaggtctcaacatgtgtatgagtggcagcgctaca
tcctgtgaagaatgcctcctgattcaccccagttgtgcctggtgcgcacaagagcacttt
gggaggggtcggactctgacatcgaggtgcgacttcaaacaaaacctgcataagagaggc
tgcgatccgctgttcatagagttccccagcagcagcgtttctatcctgcagaacatgccg
ctgagcgataaagggtccggggcgacccaatacgatgtggtccagattatgccccagagc
gtctctctcagcctgcggcccggagaacagacgtggttcgggctgcaggtacggcaggtg
gaggactacccagtggatctttactacctgatggacctgtctctgtccatgaaggacgat
ctggacaccatccgaaacctgggcaccaagctggctcaggagatgggcaaactcaccagc
aacttcagactgggctttggttcctttgtggacaaaaacatgtcgcccttctcctacaca
gcacccaagtatcaggagaacccctgcaatggatacaaactgtttcctaactgcgtcccc
accttcggtttccgtaacatcctctcgctgacggacaaggtcgaccgtttcaacgaggag
gtgcagaagcagatggtgtcccgcaacagggacgcacctgagggcgggtttgacgccatc
ctgcaggcagctgtttgtaagacggagatcgggtggagaaaggaggcgtaccacctgctg
gtgttcaccacagacgacgttcctcatctcgctctggacggtcggctgggaggcctcgtc
cagccgcacgatggaaagtgccacctgaacgagaagaacgagtacagcgcctccacagag
atggactatccgtctctggctcttctgggagagaaactggctgaaaacaacatctttctc
atctttgcagtgaccaaacgtttctatgtcatttataagaattttactgccctcataccg
gggaccacagtagaaatcctggaccaggactccaagaatgtgatccagctcatcgtcgca
gcgtacaataacatccgctccaaagtggagctgtcagtgtgggatcacccggaggacatc
agcctttccttcacagccacctgccaggatggaaaacccctgccgggcctcaggaagtgt
gccgacctgaagatcggagacacggtgtccttcaatgtgagcgtggaggcgaggagctgc
cctccccgcagcaccgaccagagcttcacgatcaggccggtgggcttcaaagaccgcctg
gaggtgtctgtggattatcagtgtgactgtgactgcagcaagaaagcccaaaccaacagc
agcatctgcagctccataggtacatataactgcgggaagtgtcagtgcgagccgggctac
ctgggtgcccgctgtgagtgccaggagggcgagaccagcagcatgtacctgagcgcctgc
agggaggccgagggcaagcagatctgcagcgggagaggagagtgcagctgcaaccagtgt
ctctgcttcgagtccgagttcgggaagatttacgggagctactgcgagtgtgacgacttc
tcctgcgccagacacaaaggaatcctctgctcaggtcacggagagtgtcactgcggggag
tgcaaatgccacgccgggttcgtcggagacaactgtaactgctccacggagacgtccacg
tgtgtctcggacgacgggcagatgtgcagcgggagaggaaactgtgtgtgtggacgctgt
cagtgcacagagcccggagccttcggagatacctgcgagaaatgccccacctgccccgac
gcctgcggcaccaaaagggagtgcatcgagtgtcggctcttcaactcaggacgcctcgca
gacaaccagacctgccagcgcctgtgcaaggacgaaatcatcacagtggagaccctcaaa
acggaggagcctggcgctgttctctgtctctttaagacggacaacgattgtgtcatgaag
ttcacgtattctgagcacgtcagcggacagtccatcctcacggcgctcaaagagccagag
tgtggaggtggtactgatgccatgatggtgctgctcgcggtggtcggcagcatcctgctg
gtgggagtcattctgctcgccgtctggaaaacggtcatcaccgtccacgaccggcgagag
tttgcacgcttccagagcgcacgatcacgagcccgatatgagatggcctccaacccgctg
tacaagcagcccgtctctactcactttgtggaaacggacttcagcatgtacgggaagtct
tacaacggaggggtccactga
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