Labrus mixtus (cuckoo wrasse): 132987220
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Entry
132987220 CDS
T10666
Symbol
chpfa
Name
(RefSeq) chondroitin sulfate synthase 2
KO
K00747
chondroitin polymerizing factor [EC:
2.4.1.175
2.4.1.226
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
lmix01100
Metabolic pathways
Module
lmix_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
132987220 (chpfa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lmix01003
]
132987220 (chpfa)
Enzymes [BR:
lmix01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
132987220 (chpfa)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
132987220 (chpfa)
Glycosyltransferases [BR:
lmix01003
]
Glycan extension
O-Glycan
132987220 (chpfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
DUF5380
Motif
Other DBs
NCBI-GeneID:
132987220
NCBI-ProteinID:
XP_060910104
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All DBs
Position
13:complement(20924759..20932964)
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AA seq
766 aa
AA seq
DB search
MRLSAFISVLRSVGPVVIGISLGFTLSLLSVSWTEEACYSDAKQGEDMTSSQDGLLKGAR
KPNSISTVNEVESDEDFDPRIVPYKQVQQSASKKVFRAKYISTELGMRERLFVGVLTSKN
TMNTLGVAVNRTISHHLDTVIFFTGMRNRKVPHGMFVVSHGDERLIWNMFQNIKYILDHY
INEYDWFYFVQDDAYTGADRIKVLVDHLSMDRELYMGSPEEFIGGKMEGKYCYGGYGYLL
SRTLLLRLQPFLENCRNDILSARPDEWLGRCIIDYTDTNCVSEYEGLQYHRYELGKNSDP
SKEQSEQFKRAVAVHPVSDPEQMYRLHRYFTEIELQKTYDEIAKLQEEIKNVSVVAFEGN
RSAQWPVGINPPFEPKSRFEVLKWEYFTEEEIYSCTDGSPKCELRGIDRLDVADVIATAM
GELNKKYMPVLHLKKQQLINGYRRFDPIRGMEYTLDLQLEVVNQKGHSRSITKRVHLVRP
LSRIEIIPMPYVTEATRVHIIIPLTLQDRTYVNHFLEVFASNAFETSENAILTFLFIYDP
VEAQQVNQNDIFASVKTQINAYEHKYPAVKIPWISVKTETPSQIKYMDIISKKHPVDTLF
FLANANTNVNSEFLNRCRMNSINNWQVFFPIHFQDFNPDVAYHNQQRPVTFDLVKDAGHF
DQRSFEEACFYNSDYMATRTRMVADVQENEEILDTLDVYDMFVKYSSLHVFRAVEPALHQ
QYRYQACNPRLSEDIYHRCMQSNMEGLGSRSQLAMLLFQQEQGNST
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgagattgtcggcgttcatttctgtcctgcggtcggtcggcccggtggtaatcggtatt
tctttaggcttcaccttgagtttactgagtgtaagctggactgaagaagcatgctactcg
gacgctaagcagggggaggacatgacttcgagtcaagatgggctgcttaaaggagcccga
aaacccaactctatatcgactgtgaacgaggtggagtccgacgaggactttgatccaagg
atagtcccatataaacaagtccaacaaagtgcgtcgaagaaagttttcagagctaaatac
ataagcacagagttggggatgcgagagcgtctgtttgtcggggtcctgacatctaaaaac
accatgaacaccctgggggtagctgttaatcgcaccattagtcaccacctggacaccgtg
atcttcttcactggcatgcgcaaccgcaaagttcctcacggcatgttcgttgtctctcat
ggagacgagagactgatatggaacatgttccagaacatcaagtacattttggaccattac
atcaacgaatacgactggttttactttgtccaagatgacgcctacacgggagctgacagg
ataaaagtcctcgtagatcacctcagtatggaccgagagctttacatgggcagtcctgag
gagttcattgggggaaagatggagggaaagtattgctacggaggatatggatacctcctt
tcacgtaccttgctcctccgacttcagcccttcctggaaaactgcagaaatgacatcctt
agtgcaaggcctgatgagtggctcggaagatgcatcattgattatacagacacaaactgt
gtcagtgaatatgaggggctgcagtatcaccgttatgaattaggaaaaaactctgacccc
agtaaagagcagagtgaacagttcaagagagctgtggccgtccatccagtgtctgaccct
gaacagatgtaccggctgcacagatacttcactgagattgaactgcagaagacttacgat
gagatcgctaagctgcaggaagaaataaagaatgtcagtgtagttgcttttgagggtaat
cgaagcgcccagtggcctgtggggatcaatccaccctttgagccaaaatctcggttcgaa
gttttaaagtgggaatattttacagaggaggagatttactcttgcactgatggctctcca
aaatgtgaactgcgtggcattgatcgcttggatgttgctgatgtcattgccacggccatg
ggagagttgaacaagaagtacatgcctgtcttacacctgaagaagcagcagctcataaat
ggatacaggcgcttcgaccctatcaggggcatggagtacaccttggaccttcagcttgag
gtggttaaccaaaaaggtcatagccgttccatcactaagcgggttcatttggtgcgacct
ttgagtcggattgagatcatccccatgccctatgttactgaggctacaagggtccacatc
attatacctcttactctgcaggacaggacttatgtcaaccatttcctggaagtctttgcc
tctaacgcttttgaaactagtgaaaatgcaatccttactttcttgtttatttatgaccca
gtggaggcacagcaagttaaccaaaatgatatatttgccagtgtgaagactcaaataaat
gcatatgaacacaaataccctgccgtaaaaatcccgtggataagtgtcaagacagaaaca
ccatcccagatcaagtatatggacatcatctcaaagaagcacccagttgacacgctgttc
tttttagctaatgccaacacaaacgtcaattcagaatttctgaaccgctgccgcatgaat
tccatcaacaactggcaggtgttttttccgatccacttccaggacttcaaccctgatgtg
gcctatcacaaccaacaacgccctgtcacatttgatctggttaaggatgcaggccatttc
gaccaacggtcatttgaagaagcatgtttttacaactcggactacatggcaacgcgcaca
cgcatggtggcagacgtccaagagaacgaggagattctggacactttggacgtctatgac
atgtttgtgaagtattccagtctacacgtatttagagcagtggagccagcattgcaccag
cagtacaggtaccaagcatgcaacccacggctgagtgaagacatctatcatagatgcatg
cagagcaacatggaaggtcttggttcccgatcccagctcgccatgcttctgtttcagcaa
gaacaaggaaatagcacctga
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