KEGG   Labrus mixtus (cuckoo wrasse): 132987358
Entry
132987358         CDS       T10666                                 
Symbol
scn1laa
Name
(RefSeq) sodium channel, voltage-gated, type I-like, alpha
  KO
K04834  voltage-gated sodium channel type II alpha
Organism
lmix  Labrus mixtus (cuckoo wrasse)
Brite
KEGG Orthology (KO) [BR:lmix00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:lmix04040]
    132987358 (scn1laa)
Ion channels [BR:lmix04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   132987358 (scn1laa)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc Na_trans_cytopl IQ_SCN5A_C PKD_channel GPHH ATP-synt_B
Other DBs
NCBI-GeneID: 132987358
NCBI-ProteinID: XP_060910358
LinkDB
Position
13:25454125..25483415
AA seq 1979 aa
MAQLLVPPGIDSFRRFSRESLKVIEKRIAEEKANKPKGEKKKRNDDNELKPSRDLEAGKS
LPMLYGDVPKGMVSTPLEDLDPYYCNQKTFTVLNKGNIIFRFNAEPALYLLSPFNLIRRI
SMKILVHSLFSMVIMCTILANCAFMTMSEPQKWTKNVEYTFTAVYTIESLVKILARGFCI
GKFTFLRDPWNWLDFSVIVMAYATEFLNMGNFSALRTFRVLRAFKAISVIPGLKTIVAAL
FQAVKKLADVMILTVFCLSVFALIGLQLFMGHLKQKCIKTIDNSTTNGTEANGNFSWEDY
ASDTKNHYVLPGKRDALLCGNGSESGQCPEGYSCIKHGKNPDYNYTSFDSFGWAFLSLFR
LMTQDYWENLYQQTLRAAGKPYMVFFVLVIFLGSFYLVNLILAVVAMAYEEQSQATIKEA
KEKEEEFQAMLEQLKRQQEEAQAAVSAAAAEGGGVGDNVGGTESSSGTSKLSSKSAKERR
NRRKKRKEEQGKGADEKFAQSESQDSVKKGRCRFSVDANLLNYDMKCSTAHQSFLSFRGP
LFSPRRNSRTSIFSFQSQAQDMGSENEFADDENSIFDDNLSRRGSLFFPTSRDRNSSSVS
QGSFLPNFLLQTNGIKHSSVDCNGVVSLMGWNSLPSSPVGLLLPKVTVDTASTGDNADTT
DTGGGTNPECMDFLEGPEARQRLQSVTSVITSTMGELEESRKKCPPCWYDFANTFLVWEC
CPAWLKIKKLINLIVMDPFTDLTITICIALNTLFMAMEHYPMSEGFANMLCVGNYVFTGI
FTAEMVLKIIAMDPYYYFQEGWNIFDAIIVSLSLVEFFLEQKGNMSVLRSFRLLRVFKLA
KSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKDCVCKISQDCTLP
RWHMSDFFHSFLIVFRVLCGEWIETMWDCMEVAGTPMCLTVYMMVMVIGNLVVLNLFLAL
LLSSFSADNLASIEDDNEMNNLQIAIGRIQNGIAYVKSALRSHYSRFCLRDRKKGKAEDK
SLEELHKPLGPNCVPNHTIKDFPRNGNGDVTGVGKNGDKYIVSSKSDDSIMSFINNPSLT
VTVPIAVGESDFENLNTEDFSSLSSDAVGCRVLIQDDGQFSSSEGSTVDGMAGEGGESDD
FDLEEAMEPDSCFPEGCVQKYKCCQVNVEVGRWKMWWTLRKTCFRIVEHNWFESFIIFMI
LLSSGALALEDVNIEKRKTIKTVLEFADKIFTYIFILEMLLKWVAYGFAKYFTNAWCWLD
FLIVDVSLVSLVANSMNYSDLGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIF
NVLLVCLIFWLIFSIMGVNLFAGKFYRCVNKTTDEILPTSIVKNQLNCTNLNGSRWKNVK
INFDNVGFGYLALLQVATFKGWMEIMYAAVDSQSMAGEQPEYEINLKMYMYFVVFIIFGA
FFTLNLFIGVIIDNFNQQKKKIRGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSNNIQ
GYIFDLTTKQAFDILIMVLIVLNMVTMMVETDEQSETKINVLWWINLLFIVIFSGECLLK
MISLRHYFFTNGWNVFDFIVVILSIMGMFLSEVIEKYFVSPTLFRVIRLARIGRVLRLIK
SAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKREKGIDDLFNFETFG
NSMICLFQITTSAGWSDLLDPILNKNEDCDMTLEHPGSPGTGNCGNPTVGIAFFVSYIII
CFLIVINMYIAVILENFGVATEESADPLSEDDFEMFYEVWENFDPHATQFIEFKKLAEFA
DELEPPLRIAKPNKLELISMDLPMVSGERIHCLDILFAFTKRVLGEGGEMDILRAQMEER
FMASNPSKLSYEPITTTLRRKQEDTSAIVIQKAYRRYAIRHFATKSPDASSDSIQKDERF
IDNEDVVPDKLKTNASTELTPPTAPQQACNSVTMNGNNKYEIDKSEKEVAGKDVKEQDI
NT seq 5940 nt   +upstreamnt  +downstreamnt
atggcacagctgcttgtaccaccaggtatagacagcttccgtcgctttagccgtgagtcc
ctcaaagtcatcgagaagcggatcgcagaggagaaggccaacaagcccaagggggagaag
aaaaaacgcaatgatgacaacgagctcaagcccagccgtgacctggaggcgggcaaatcc
ctcccaatgctgtacggggacgttcctaaaggcatggtgtcgacaccgctggaggacctg
gacccctactactgtaatcaaaaaactttcacagtgttaaacaaagggaacatcatcttc
cgcttcaacgccgaacctgccttgtacctcctgagccccttcaacctcataagaagaata
tcaatgaagattttggtacactcattattcagtatggtgattatgtgcactattcttgcc
aactgtgcattcatgactatgagtgaaccgcagaagtggacaaaaaatgtcgagtacacc
tttactgcagtgtataccattgaatccctcgttaaaattttagcccgagggttttgcata
gggaaattcacgtttctaagagatccctggaactggttggatttcagtgtcattgtcatg
gcgtatgcaacagagtttttgaacatgggcaatttctcagctctccggacattcagagtg
ctgagagcgtttaaagctatctcagttatcccaggcctgaagaccatcgttgcggcgttg
ttccaggcagtgaagaaacttgccgatgtgatgatcctcactgtcttttgtctgagcgtc
ttcgccctcatagggttacaactgtttatgggccatttaaagcaaaagtgtataaagaca
attgataattccacaacaaatgggactgaagccaatggaaacttcagctgggaggattat
gcatctgatacgaagaatcattatgtccttccaggcaaacgagatgcattgctttgtggg
aatggcagtgaatctgggcagtgtccagaaggctacagttgcatcaaacatggaaaaaac
ccggactataattacaccagttttgactcgtttggttgggccttcctctctctgttcagg
ctgatgacacaggattactgggaaaacctctaccagcagacgctgcgggcagctgggaag
ccctacatggtttttttcgtgctggtgatattcctcggttctttctacctggtcaacctg
atcttggctgtagttgctatggcctatgaggagcagagccaggccaccataaaggaggca
aaggagaaggaggaggagtttcaggctatgcttgagcagctgaaacggcagcaagaggaa
gcccaggcggcagtatctgcagctgctgcagagggtggaggggtcggcgacaacgttgga
gggactgagagctcttctggcacttccaagctcagctccaaaagtgccaaagagagacgc
aacaggcggaagaaaaggaaggaggagcagggcaaaggagctgacgagaagtttgctcaa
tcggagtcccaagacagtgtgaagaaaggtcgctgccgcttctcagtggatgcaaacctg
ctcaactatgacatgaaatgctcaacagcacatcagtcctttctgagttttcgtggcccc
ctgttctcacccagacggaacagcagaaccagcattttcagtttccagagccaagcacag
gacatggggtcagaaaatgagtttgctgatgatgagaacagcatttttgatgacaacctg
agtcggaggggctcactgtttttccccaccagtcgtgatcgaaacagcagcagtgtgagc
cagggcagcttcttgcccaatttcttacttcaaaccaatgggatcaaacatagctctgta
gactgcaatggagttgtgtctctgatgggatggaattcactcccatcttcacctgttggg
ctccttttgccaaaagtgacggtagatacggcctctactggagacaatgctgacaccact
gacacaggtggaggaacaaacccagagtgtatggacttcctcgagggcccagaggcccga
cagagattgcagagtgttactagtgtaataacgagcacaatgggggagcttgaagagtca
aggaagaagtgtcctccttgctggtacgattttgccaacaccttccttgtctgggaatgt
tgtccagcctggctgaagatcaagaagttgattaatctgatagtgatggatccatttacg
gacttaaccatcactatctgcattgcgctcaacacattgttcatggctatggagcattac
ccaatgagcgaaggattcgctaacatgctatgtgtagggaattatgtattcactgggatt
tttactgcagaaatggtccttaagatcattgctatggacccgtattattacttccaggag
ggatggaatatttttgatgcaatcattgtcagtttaagcttggtggagttttttttggaa
caaaagggtaacatgtctgtcctgagatcattcagattgcttagagtattcaagctggct
aaatcatggcccactctaaacacccttatcaaaatcattggtaattcagtgggggctttg
ggcaacctgacgctcgtgctggccattatcgtgttcatctttgctgtggtgggcatgcaa
ctgttcggaaagaactacaaggactgtgtgtgtaaaatctctcaagattgcactctgccc
cgttggcacatgagtgacttcttccattcattcctcattgtgttccgagtgctttgtgga
gagtggatagagaccatgtgggactgtatggaggtggctgggacgcccatgtgcctcact
gtgtacatgatggtcatggttattggaaaccttgtggtgctgaacctgttcctggccctg
ttgctgagttcattcagtgctgacaacctggcatcgattgaagacgacaacgagatgaac
aatttgcagattgccattggacggatccaaaatggcatcgcctatgttaagtcagcactt
cgaagtcactatagccgtttctgtctcagagataggaaaaaagggaaggctgaggacaaa
tccctggaggaactgcataaacctttaggacctaattgtgtcccaaaccacacaatcaaa
gactttcccagaaatggaaatggggatgttactggggtgggaaaaaatggagacaaatac
atcgtaagcagcaagagtgatgattcaataatgtcattcatcaacaatcccagtcttact
gtgactgttcccattgctgtgggcgagtcagactttgaaaacctaaacacagaggacttc
agcagcctctcgtctgatgcagtcggatgtcgtgtgctcatacaagacgatggtcagttt
agctcctctgagggcagcacggtggacggtatggcaggagagggaggagagtcagacgac
tttgatctggaagaagctatggagccagattcttgcttccctgaaggatgtgtgcaaaag
tacaaatgctgtcaagttaacgtggaagtgggccgctggaagatgtggtggaccctaaga
aagacctgtttccggatagtggagcacaactggtttgagagcttcattatcttcatgatc
ttgctcagcagtggagcactggccttggaagacgtcaacattgaaaagaggaagactatt
aaaacggtgctggagtttgccgacaaaatcttcacctacatcttcatcctggagatgtta
ctgaagtgggtggcgtatggattcgccaagtatttcacaaatgcctggtgctggctggac
ttcctcattgttgatgtctcactggttagtttggtagcaaactccatgaactattctgac
ctcggtgccatcaagtctctaagaacactgcgagctctgaggcccctgagagccttgtca
cgtttcgaaggcatgagggtggttgtcaatgccctactgggagccattccttccattttc
aacgtgctgctggtttgtctcatcttctggctcatcttcagcatcatgggagtcaactta
tttgcggggaagttctaccgttgtgtcaacaaaactacagatgagattttacctacatca
attgtgaaaaaccagttaaattgtacaaacctaaatggtagccgctggaaaaacgtcaaa
atcaactttgacaatgttggctttggttaccttgcactgcttcaagtggctacattcaaa
ggctggatggaaatcatgtacgctgctgtggactctcaaagcatggcaggagaacagcct
gagtatgagatcaacctaaaaatgtacatgtattttgttgttttcatcatatttggagcg
ttcttcacactcaatctctttattggtgtcatcatagacaatttcaatcaacagaaaaaa
aagataagaggtcaagacatcttcatgactgaagaacagaaaaaatactacaatgccatg
aaaaagttggggtcaaagaaaccacaaaaacctattcctagaccatcaaacaacattcaa
ggatacatctttgacctgactacaaaacaagcatttgatattttaatcatggtactaata
gtgctcaatatggtgaccatgatggtggaaactgatgaacagtcagaaaccaagatcaac
gttctctggtggatcaatttattatttatcgtcatcttctctggagagtgtttgttgaag
atgatctcactccgccattactttttcacaaatggttggaatgtatttgacttcattgtg
gtcatcctgtcaatcatgggtatgtttctctcggaagtgatagagaagtatttcgtttca
ccaaccttgttcagagtcatccgattggctcggattggccgcgtcctccgtctgatcaaa
agtgccaaaggaatccgcacgctattgtttgcattgatgatgtcacttcctgccttgttc
aatattgggctcttgcttttccttgtgatgtttatttacgccatttttggcatgtcaaac
tttgcgtacgtcaagagggaaaaaggaatcgacgatcttttcaacttcgagacatttggc
aacagtatgatctgtttgttccagatcacaacgtcggcaggatggagtgatttactagat
ccaattcttaacaaaaacgaagattgtgacatgacattggagcatcctggcagtcctggc
acaggaaactgtggaaacccgactgtgggaattgccttctttgtgagttacatcataatc
tgtttcctgattgtgattaacatgtacattgcagtcatcctggaaaactttggtgtggcc
actgaggagagtgcggaccctctaagtgaggatgattttgagatgttttatgaggtctgg
gaaaattttgatcctcacgcaacacagttcattgagttcaagaagttggcagagtttgca
gatgaactggaaccaccattgcgcatagccaagcctaacaagcttgaattgatctctatg
gatctaccaatggtgagtggtgaacgaattcactgcctggacatcctgtttgcattcaca
aaacgtgtcctgggcgagggtggggagatggacattttaagggctcagatggaagaacgc
ttcatggcctccaatccttccaaactgtcctacgagcccatcactaccaccctccggcgc
aagcaggaggacacgtcagccatcgtcatccagaaagcatacagacggtatgcaatcaga
cattttgccactaagtcccctgatgcatccagtgatagcattcaaaaggatgaaagattc
attgacaatgaggatgttgtcccagacaaactgaaaacaaacgctagcactgaactaaca
cctccaacagcccctcaacaagcatgtaacagtgtgacaatgaatggaaacaataagtat
gaaatagacaaaagtgaaaaagaggttgctggcaaagatgtcaaggagcaagatatatga

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