Labrus mixtus (cuckoo wrasse): 132987358
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Entry
132987358 CDS
T10666
Symbol
scn1laa
Name
(RefSeq) sodium channel, voltage-gated, type I-like, alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
lmix Labrus mixtus (cuckoo wrasse)
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lmix04040
]
132987358 (scn1laa)
Ion channels [BR:
lmix04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
132987358 (scn1laa)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
132987358
NCBI-ProteinID:
XP_060910358
LinkDB
All DBs
Position
13:25454125..25483415
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AA seq
1979 aa
AA seq
DB search
MAQLLVPPGIDSFRRFSRESLKVIEKRIAEEKANKPKGEKKKRNDDNELKPSRDLEAGKS
LPMLYGDVPKGMVSTPLEDLDPYYCNQKTFTVLNKGNIIFRFNAEPALYLLSPFNLIRRI
SMKILVHSLFSMVIMCTILANCAFMTMSEPQKWTKNVEYTFTAVYTIESLVKILARGFCI
GKFTFLRDPWNWLDFSVIVMAYATEFLNMGNFSALRTFRVLRAFKAISVIPGLKTIVAAL
FQAVKKLADVMILTVFCLSVFALIGLQLFMGHLKQKCIKTIDNSTTNGTEANGNFSWEDY
ASDTKNHYVLPGKRDALLCGNGSESGQCPEGYSCIKHGKNPDYNYTSFDSFGWAFLSLFR
LMTQDYWENLYQQTLRAAGKPYMVFFVLVIFLGSFYLVNLILAVVAMAYEEQSQATIKEA
KEKEEEFQAMLEQLKRQQEEAQAAVSAAAAEGGGVGDNVGGTESSSGTSKLSSKSAKERR
NRRKKRKEEQGKGADEKFAQSESQDSVKKGRCRFSVDANLLNYDMKCSTAHQSFLSFRGP
LFSPRRNSRTSIFSFQSQAQDMGSENEFADDENSIFDDNLSRRGSLFFPTSRDRNSSSVS
QGSFLPNFLLQTNGIKHSSVDCNGVVSLMGWNSLPSSPVGLLLPKVTVDTASTGDNADTT
DTGGGTNPECMDFLEGPEARQRLQSVTSVITSTMGELEESRKKCPPCWYDFANTFLVWEC
CPAWLKIKKLINLIVMDPFTDLTITICIALNTLFMAMEHYPMSEGFANMLCVGNYVFTGI
FTAEMVLKIIAMDPYYYFQEGWNIFDAIIVSLSLVEFFLEQKGNMSVLRSFRLLRVFKLA
KSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKDCVCKISQDCTLP
RWHMSDFFHSFLIVFRVLCGEWIETMWDCMEVAGTPMCLTVYMMVMVIGNLVVLNLFLAL
LLSSFSADNLASIEDDNEMNNLQIAIGRIQNGIAYVKSALRSHYSRFCLRDRKKGKAEDK
SLEELHKPLGPNCVPNHTIKDFPRNGNGDVTGVGKNGDKYIVSSKSDDSIMSFINNPSLT
VTVPIAVGESDFENLNTEDFSSLSSDAVGCRVLIQDDGQFSSSEGSTVDGMAGEGGESDD
FDLEEAMEPDSCFPEGCVQKYKCCQVNVEVGRWKMWWTLRKTCFRIVEHNWFESFIIFMI
LLSSGALALEDVNIEKRKTIKTVLEFADKIFTYIFILEMLLKWVAYGFAKYFTNAWCWLD
FLIVDVSLVSLVANSMNYSDLGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIF
NVLLVCLIFWLIFSIMGVNLFAGKFYRCVNKTTDEILPTSIVKNQLNCTNLNGSRWKNVK
INFDNVGFGYLALLQVATFKGWMEIMYAAVDSQSMAGEQPEYEINLKMYMYFVVFIIFGA
FFTLNLFIGVIIDNFNQQKKKIRGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSNNIQ
GYIFDLTTKQAFDILIMVLIVLNMVTMMVETDEQSETKINVLWWINLLFIVIFSGECLLK
MISLRHYFFTNGWNVFDFIVVILSIMGMFLSEVIEKYFVSPTLFRVIRLARIGRVLRLIK
SAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKREKGIDDLFNFETFG
NSMICLFQITTSAGWSDLLDPILNKNEDCDMTLEHPGSPGTGNCGNPTVGIAFFVSYIII
CFLIVINMYIAVILENFGVATEESADPLSEDDFEMFYEVWENFDPHATQFIEFKKLAEFA
DELEPPLRIAKPNKLELISMDLPMVSGERIHCLDILFAFTKRVLGEGGEMDILRAQMEER
FMASNPSKLSYEPITTTLRRKQEDTSAIVIQKAYRRYAIRHFATKSPDASSDSIQKDERF
IDNEDVVPDKLKTNASTELTPPTAPQQACNSVTMNGNNKYEIDKSEKEVAGKDVKEQDI
NT seq
5940 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccaccaggtatagacagcttccgtcgctttagccgtgagtcc
ctcaaagtcatcgagaagcggatcgcagaggagaaggccaacaagcccaagggggagaag
aaaaaacgcaatgatgacaacgagctcaagcccagccgtgacctggaggcgggcaaatcc
ctcccaatgctgtacggggacgttcctaaaggcatggtgtcgacaccgctggaggacctg
gacccctactactgtaatcaaaaaactttcacagtgttaaacaaagggaacatcatcttc
cgcttcaacgccgaacctgccttgtacctcctgagccccttcaacctcataagaagaata
tcaatgaagattttggtacactcattattcagtatggtgattatgtgcactattcttgcc
aactgtgcattcatgactatgagtgaaccgcagaagtggacaaaaaatgtcgagtacacc
tttactgcagtgtataccattgaatccctcgttaaaattttagcccgagggttttgcata
gggaaattcacgtttctaagagatccctggaactggttggatttcagtgtcattgtcatg
gcgtatgcaacagagtttttgaacatgggcaatttctcagctctccggacattcagagtg
ctgagagcgtttaaagctatctcagttatcccaggcctgaagaccatcgttgcggcgttg
ttccaggcagtgaagaaacttgccgatgtgatgatcctcactgtcttttgtctgagcgtc
ttcgccctcatagggttacaactgtttatgggccatttaaagcaaaagtgtataaagaca
attgataattccacaacaaatgggactgaagccaatggaaacttcagctgggaggattat
gcatctgatacgaagaatcattatgtccttccaggcaaacgagatgcattgctttgtggg
aatggcagtgaatctgggcagtgtccagaaggctacagttgcatcaaacatggaaaaaac
ccggactataattacaccagttttgactcgtttggttgggccttcctctctctgttcagg
ctgatgacacaggattactgggaaaacctctaccagcagacgctgcgggcagctgggaag
ccctacatggtttttttcgtgctggtgatattcctcggttctttctacctggtcaacctg
atcttggctgtagttgctatggcctatgaggagcagagccaggccaccataaaggaggca
aaggagaaggaggaggagtttcaggctatgcttgagcagctgaaacggcagcaagaggaa
gcccaggcggcagtatctgcagctgctgcagagggtggaggggtcggcgacaacgttgga
gggactgagagctcttctggcacttccaagctcagctccaaaagtgccaaagagagacgc
aacaggcggaagaaaaggaaggaggagcagggcaaaggagctgacgagaagtttgctcaa
tcggagtcccaagacagtgtgaagaaaggtcgctgccgcttctcagtggatgcaaacctg
ctcaactatgacatgaaatgctcaacagcacatcagtcctttctgagttttcgtggcccc
ctgttctcacccagacggaacagcagaaccagcattttcagtttccagagccaagcacag
gacatggggtcagaaaatgagtttgctgatgatgagaacagcatttttgatgacaacctg
agtcggaggggctcactgtttttccccaccagtcgtgatcgaaacagcagcagtgtgagc
cagggcagcttcttgcccaatttcttacttcaaaccaatgggatcaaacatagctctgta
gactgcaatggagttgtgtctctgatgggatggaattcactcccatcttcacctgttggg
ctccttttgccaaaagtgacggtagatacggcctctactggagacaatgctgacaccact
gacacaggtggaggaacaaacccagagtgtatggacttcctcgagggcccagaggcccga
cagagattgcagagtgttactagtgtaataacgagcacaatgggggagcttgaagagtca
aggaagaagtgtcctccttgctggtacgattttgccaacaccttccttgtctgggaatgt
tgtccagcctggctgaagatcaagaagttgattaatctgatagtgatggatccatttacg
gacttaaccatcactatctgcattgcgctcaacacattgttcatggctatggagcattac
ccaatgagcgaaggattcgctaacatgctatgtgtagggaattatgtattcactgggatt
tttactgcagaaatggtccttaagatcattgctatggacccgtattattacttccaggag
ggatggaatatttttgatgcaatcattgtcagtttaagcttggtggagttttttttggaa
caaaagggtaacatgtctgtcctgagatcattcagattgcttagagtattcaagctggct
aaatcatggcccactctaaacacccttatcaaaatcattggtaattcagtgggggctttg
ggcaacctgacgctcgtgctggccattatcgtgttcatctttgctgtggtgggcatgcaa
ctgttcggaaagaactacaaggactgtgtgtgtaaaatctctcaagattgcactctgccc
cgttggcacatgagtgacttcttccattcattcctcattgtgttccgagtgctttgtgga
gagtggatagagaccatgtgggactgtatggaggtggctgggacgcccatgtgcctcact
gtgtacatgatggtcatggttattggaaaccttgtggtgctgaacctgttcctggccctg
ttgctgagttcattcagtgctgacaacctggcatcgattgaagacgacaacgagatgaac
aatttgcagattgccattggacggatccaaaatggcatcgcctatgttaagtcagcactt
cgaagtcactatagccgtttctgtctcagagataggaaaaaagggaaggctgaggacaaa
tccctggaggaactgcataaacctttaggacctaattgtgtcccaaaccacacaatcaaa
gactttcccagaaatggaaatggggatgttactggggtgggaaaaaatggagacaaatac
atcgtaagcagcaagagtgatgattcaataatgtcattcatcaacaatcccagtcttact
gtgactgttcccattgctgtgggcgagtcagactttgaaaacctaaacacagaggacttc
agcagcctctcgtctgatgcagtcggatgtcgtgtgctcatacaagacgatggtcagttt
agctcctctgagggcagcacggtggacggtatggcaggagagggaggagagtcagacgac
tttgatctggaagaagctatggagccagattcttgcttccctgaaggatgtgtgcaaaag
tacaaatgctgtcaagttaacgtggaagtgggccgctggaagatgtggtggaccctaaga
aagacctgtttccggatagtggagcacaactggtttgagagcttcattatcttcatgatc
ttgctcagcagtggagcactggccttggaagacgtcaacattgaaaagaggaagactatt
aaaacggtgctggagtttgccgacaaaatcttcacctacatcttcatcctggagatgtta
ctgaagtgggtggcgtatggattcgccaagtatttcacaaatgcctggtgctggctggac
ttcctcattgttgatgtctcactggttagtttggtagcaaactccatgaactattctgac
ctcggtgccatcaagtctctaagaacactgcgagctctgaggcccctgagagccttgtca
cgtttcgaaggcatgagggtggttgtcaatgccctactgggagccattccttccattttc
aacgtgctgctggtttgtctcatcttctggctcatcttcagcatcatgggagtcaactta
tttgcggggaagttctaccgttgtgtcaacaaaactacagatgagattttacctacatca
attgtgaaaaaccagttaaattgtacaaacctaaatggtagccgctggaaaaacgtcaaa
atcaactttgacaatgttggctttggttaccttgcactgcttcaagtggctacattcaaa
ggctggatggaaatcatgtacgctgctgtggactctcaaagcatggcaggagaacagcct
gagtatgagatcaacctaaaaatgtacatgtattttgttgttttcatcatatttggagcg
ttcttcacactcaatctctttattggtgtcatcatagacaatttcaatcaacagaaaaaa
aagataagaggtcaagacatcttcatgactgaagaacagaaaaaatactacaatgccatg
aaaaagttggggtcaaagaaaccacaaaaacctattcctagaccatcaaacaacattcaa
ggatacatctttgacctgactacaaaacaagcatttgatattttaatcatggtactaata
gtgctcaatatggtgaccatgatggtggaaactgatgaacagtcagaaaccaagatcaac
gttctctggtggatcaatttattatttatcgtcatcttctctggagagtgtttgttgaag
atgatctcactccgccattactttttcacaaatggttggaatgtatttgacttcattgtg
gtcatcctgtcaatcatgggtatgtttctctcggaagtgatagagaagtatttcgtttca
ccaaccttgttcagagtcatccgattggctcggattggccgcgtcctccgtctgatcaaa
agtgccaaaggaatccgcacgctattgtttgcattgatgatgtcacttcctgccttgttc
aatattgggctcttgcttttccttgtgatgtttatttacgccatttttggcatgtcaaac
tttgcgtacgtcaagagggaaaaaggaatcgacgatcttttcaacttcgagacatttggc
aacagtatgatctgtttgttccagatcacaacgtcggcaggatggagtgatttactagat
ccaattcttaacaaaaacgaagattgtgacatgacattggagcatcctggcagtcctggc
acaggaaactgtggaaacccgactgtgggaattgccttctttgtgagttacatcataatc
tgtttcctgattgtgattaacatgtacattgcagtcatcctggaaaactttggtgtggcc
actgaggagagtgcggaccctctaagtgaggatgattttgagatgttttatgaggtctgg
gaaaattttgatcctcacgcaacacagttcattgagttcaagaagttggcagagtttgca
gatgaactggaaccaccattgcgcatagccaagcctaacaagcttgaattgatctctatg
gatctaccaatggtgagtggtgaacgaattcactgcctggacatcctgtttgcattcaca
aaacgtgtcctgggcgagggtggggagatggacattttaagggctcagatggaagaacgc
ttcatggcctccaatccttccaaactgtcctacgagcccatcactaccaccctccggcgc
aagcaggaggacacgtcagccatcgtcatccagaaagcatacagacggtatgcaatcaga
cattttgccactaagtcccctgatgcatccagtgatagcattcaaaaggatgaaagattc
attgacaatgaggatgttgtcccagacaaactgaaaacaaacgctagcactgaactaaca
cctccaacagcccctcaacaagcatgtaacagtgtgacaatgaatggaaacaataagtat
gaaatagacaaaagtgaaaaagaggttgctggcaaagatgtcaaggagcaagatatatga
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integrated database retrieval system