Labrus mixtus (cuckoo wrasse): 132987924
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Entry
132987924 CDS
T10666
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132987924 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmix04131
]
132987924 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lmix04147
]
132987924 (vps36)
Membrane trafficking [BR:
lmix04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
132987924 (vps36)
Exosome [BR:
lmix04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132987924 (vps36)
Exosomal proteins of colorectal cancer cells
132987924 (vps36)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Xre-like-HTH
TssO
MA3
Motif
Other DBs
NCBI-GeneID:
132987924
NCBI-ProteinID:
XP_060910909
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Position
14:9537324..9544309
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AA seq
382 aa
AA seq
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MDRFSWSNGLLEIDETLVIQQRGVRLYDGDDKAKLDLGVALLSTHRLIWRDVKNHECCIA
MPLSQIILFEEQAAGIGKSAKIVIHLHPAPANKEPGPYQHSKYSFIKLSFKEHGQIEFHR
RLTEEMTQKRWESTTVSQPIPTGTGSQAGRTRAVGIVGIERKIEERRKETDKNISEAFED
LSKLMVKAKEMVELSRSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTH
YHLQLAKQLGDMLQAPLEERGGMMALTEVYCLVNRARGMELLSPEDLLNACKMFESLKLP
LRLRVFDSGVMVVQLQSHSEEEMIASALDNVSDKGSLTAEEFAKLLGLSVLLSKERLLLA
EKMGHLCRDDSVEGLRFYPNLF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggatcgattttcttggtcgaatgggcttttagaaattgacgaaaccttagtgatacag
caacgaggtgtgagactctatgacggtgatgataaggctaagctggatctgggagttgcc
ttgttgagtacccatcggttgatctggagggatgttaaaaaccatgaatgctgtatagcc
atgcctttgtcccagatcatcctcttcgaggagcaggctgcaggaatagggaaaagtgcg
aaaatagtgatacacctgcacccagcacctgccaacaaggagccaggtccttaccaacac
agcaagtactcgttcatcaagctgtccttcaaagaacatgggcagatagagtttcacagg
aggctgacagaagaaatgactcagaagagatgggagagtacaacggtttcacagccaatc
cccacaggaactggctcacaggcaggaaggacacgtgcagtcgggattgttggcattgag
aggaagattgaggagagaagaaaagaaacagacaaaaacatttctgaggcttttgaggac
ctcagtaagctgatggtgaaggccaaagagatggtggagttgtccaggtcgatagcgaac
aagatcaaagacaagcagggagacataacagaagacgagacaatccggtttaagtcctac
ctcctgagcatgggtatcgctaaccctgttaccagggaaacgcatggatcaggcacacat
taccatttgcagctggctaaacaactgggagacatgctacaggcccctctggaggagcga
ggaggtatgatggctctcactgaggtgtactgtcttgtcaaccgtgctagagggatggag
cttttatctccagaagatttgttaaatgcgtgcaagatgtttgagtcattaaagctcccg
ttgaggctgcgcgtgtttgacagcggtgtgatggtggtccagctgcagtctcacagcgaa
gaggaaatgatagcctcagcgctagacaatgtgtctgacaaaggctctttgacagcagag
gagtttgcaaagctcttgggcctctctgttcttctgtccaaagagaggttgctgctggct
gagaagatgggccacctgtgtagagatgactctgttgagggtttgagattctacccaaac
ctgttttga
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