KEGG   Labrus mixtus (cuckoo wrasse): 132988225
Entry
132988225         CDS       T10666                                 
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2 isoform X1
  KO
K12879  THO complex subunit 2
Organism
lmix  Labrus mixtus (cuckoo wrasse)
Pathway
lmix03013  Nucleocytoplasmic transport
lmix03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lmix00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132988225 (thoc2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    132988225 (thoc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lmix03019]
    132988225 (thoc2)
   03041 Spliceosome [BR:lmix03041]
    132988225 (thoc2)
Messenger RNA biogenesis [BR:lmix03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     132988225 (thoc2)
Spliceosome [BR:lmix03041]
 Complex C
  Other components
   EJC/TREX
    132988225 (thoc2)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    132988225 (thoc2)
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2
Other DBs
NCBI-GeneID: 132988225
NCBI-ProteinID: XP_060911467
LinkDB
Position
14:complement(16554512..16579028)
AA seq 1570 aa
MATLILPGEWIKNWEKSGKHEFVQLCKELTEKTDHGSEVRDIQAALYELCWQVVQGNLKL
DLVASVLGDMMELRDDMPSILADVFSILDLETGALEEKNKRDHYTQLVGACLFFVPEAIL
KERLDPETLESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYGKLITELGQDL
SGNITSHVVLESIKSLIGCFNLDPNRVLDIILEVYESRSDQDEFFLSLIKSYMCEPLTLC
HILGFKFKFYQEPSEETPKSLYHIAAALLHHNLIELEDLYVHLMPLDAAIIEEHKRDISD
AKQIARKLVMVVLPSEKNEDKDKEKEKEEEKNEKAPDNQKLGLLEALLRIGDWHHAQSIM
DQMPSFYAASHKAIALALCQLVHLTVEPLYRRAGLPKGARGCVLQPLRSKRAPRPAETFE
DLRRDTFSMLGYLGPHLSHDPILFAKIVRLGKGFMKENQSDGRADYKDKMDTLLSCFLSI
ADQVLLPAISLMECNACMSEELWGLFKLFPYHHRYRLYGQWKNETYSSHPLLVKVKAQTV
ERAKYIMKRLTKENVKQSGRQIGKLSHSNPTILFDYMLSQIQWYDNLIVPVVDSLKYLTS
LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTN
QLKAGKSFDLLIMKEVVQKMAGIEITDEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDALLDHELALPLCLLMAQQRNGVVFLEGGEKHLKLVGHLYDQCHDTLVQFGGFLAS
NLSTEDYIKRVPSIDILCNQFHTPHDAAFFLSRPMYAHQILSKYDELKKAEKGNRQQQKV
HKYVAACEQVMTPVHEAVVSLHPARVWDDLRPQFYATFWSLTMYDLAVPNAAYDREVNKL
KVQIKAIEENPEIPMNKKKKEKERCTALQEKLQEEEKKQAEHVQRVLHRLKLEKDNWLLA
KSTKNETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSAIIY
TVASCTENESHRYGRFLCCMLETVTRWHSDRATYEKECVNYPGFLTIFRATGFDGGNKAD
QLDYENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLTKILPCYPKVLNLGQALEC
RVHKICLEEKDKRPDLYALAMGYSGRLKSQKVHMVPENEFHHKEQPARSATPASQQNGPS
STGKPASTSSKTEEGTPEDGDRSKDKSQGTTKPVNKTNSAAAKVTTSNGNGALNSTKAVK
DRDDKEKSGKDKKEKKEKTPGSTPETKAENRREKQRDERAGKEERAAREGKEKTPKADRE
KVKAEEKSSKDEKAKAGNGEPVEPSRERDAIKESKSKEKGDRSAAAGSLKSPVPRSESAE
SERDHKRRKLDSHSSPSHSSSVKDNNNEPKDSTSKHHPNYNSVARSKSREREQEKKESDN
TQGRSKEKKEEKDRKERKRDHAVNDREASQETKRKKDENGTNSSKNSKSTSPTCDSPLSA
DKEKSKRSKSSSKEKADSVKPERTSSGGKKESRHDKEKSEKKEKRDSSGGKEEKKQYPTN
DTHKSSDKHR
NT seq 4713 nt   +upstreamnt  +downstreamnt
atggcgacacttatcctccctggtgaatggatcaaaaactgggaaaaatcaggaaaacac
gaatttgtacaactctgcaaagagctcacggaaaaaacagatcatggaagtgaggttaga
gatatacaggctgccttatacgagctttgctggcaggttgtacaagggaacctgaagttg
gatctcgttgccagcgtccttggggacatgatggaactcagagatgacatgccatcaatt
ttagcagatgtgttcagtatactagatttagagactggtgcgctggaagagaaaaacaaa
cgtgaccattacacacaactagtgggagcatgtttgttctttgttccagaggccatcctg
aaggagaggctcgatccagaaacccttgaatctcttggactcataaagcaagcccatcag
tttaatcagaagattgtaaaaatcaagactaaactattttataaacaacagaagttcaac
ttgctaagggaggagaacgagggctacggcaaactaatcactgagctcggccaggacctc
tctggcaacatcaccagccacgtcgttctggagagcataaagtccctcataggatgtttt
aacttggaccctaaccgtgttctggacattatcttggaggtgtatgagagcagatctgac
caggatgagtttttcctgtctctcatcaaatcatacatgtgtgagccgcttactctttgc
cacatcctgggcttcaagttcaagttctaccaggagccaagcgaggaaactcccaagtca
ctttaccacatcgctgctgctctgcttcaccataacctgatagagctggaagatctctac
gtacatctcatgccactagatgccgccatcatagaggaacacaaacgagatatctccgat
gccaagcagattgcccgcaaactggtcatggttgtgttgccttcggagaaaaatgaggac
aaagacaaggagaaggaaaaagaggaggaaaagaatgaaaaggctcctgataaccagaag
ctcggtctgttggaggcgctgcttagaatcggagactggcaccacgcccagagtattatg
gaccagatgccttccttctatgcagcttctcacaaggccatcgcgctggctctctgccag
ctcgtgcacctgactgttgagcctctttacagaagagcgggcctcccaaaaggggcacgt
ggatgtgtgctgcagccactgaggagcaagcgggcccctcggcctgctgagacctttgag
gaccttcgcagggacactttcagcatgctcggctacctgggccctcacctctctcacgac
cccatcctctttgccaagattgtgcgtcttgggaagggcttcatgaaagagaaccaaagt
gatggcagagctgactacaaagacaaaatggacacactgttgagttgtttcctgagcatt
gcagaccaggtgctactccctgctatctctctgatggagtgtaatgcttgcatgtctgag
gagctgtggggtctctttaaactctttccctaccatcacaggtatcggttatatggacag
tggaagaatgagacatactccagccatccactgttggttaaagtcaaagctcaaacagtg
gaacgggccaaatacattatgaagcggttgaccaaagagaatgtgaaacaatctggaagg
cagattggcaaactgagccacagcaatcccaccatcctgtttgattatatgctgtctcag
atccagtggtacgacaacctcatcgttcccgtggtggattctttaaaatacctcacatcc
ctcaactatgatgtcctggcctattgcatcattgaggctctggccaaccctgagaaggag
aagatgaagcatgacgacaccaccatctcctcgtggcttcagagtctggcaagtctgtgt
ggagccgtgttcagaaaatacccgatcgagctggctggccttcttcagtatgtcaccaat
cagctgaaggcagggaagagttttgaccttttgataatgaaagaggtggtgcagaaaatg
gccggcattgagatcactgatgagatgacctccgagcagttagaggccatgactggaggg
gagcaactcaaagccgagggtggctactttggccaaatcaggaacactaagaagtcttca
cagcgtctgaaggatgccctgctggaccatgaactggccctgcctttgtgtttactcatg
gcccagcaacgaaatggtgtcgttttcttagaaggtggagagaaacacctcaaacttgtg
ggccacctctatgatcagtgtcatgacactttggtgcagtttgggggctttttggcctcc
aacttgagcacagaggactacatcaagcgggttccctccattgacatcctttgtaaccag
ttccacactccacatgacgctgccttcttcctatctcggccgatgtatgcacaccagatt
ttgtcgaagtatgatgaactgaagaaagcagaaaagggcaacaggcagcagcagaaggtg
cacaagtatgttgcagcgtgcgaacaggtgatgaccccggtccatgaggcggtggtgtcc
ctacatccagccagagtgtgggacgacctccgacctcagttctacgccacgttctggtcc
ctcacgatgtacgacctggccgttccaaatgctgcgtacgatcgtgaggtcaacaagctc
aaggttcagatcaaggccatcgaggagaacccagagatacccatgaataagaaaaagaag
gagaaggaacgctgcactgccctgcaggagaaactgcaggaggaggagaagaagcaagcg
gagcacgttcaacgggttctacaccgcctcaagctagagaaagacaactggttgttggcc
aaatccacaaagaacgagacgataacaaagttcctgcagctctgtctgttccctcgctgc
atcttctcctccatcgacgctgtgtactgtgcccgctttgttgagctagtccaccagcag
aagacacccaacttctgcaccctcctgtgctacgacagggtgttctctgccatcatttac
acggtggccagctgtacggagaacgagtctcaccgctatggacgcttcctctgctgcatg
ctggagacggtgactcgatggcacagcgaccgagccacctatgagaaggagtgcgttaat
taccctggcttcctgaccatcttcagagccaccggctttgatggagggaacaaagcagat
cagcttgattatgagaacttcaggcatgtcgtgcacaagtggcactacatgctgacaaaa
gcttcagttcactgcctggagacgggagattacacccacatccgcaatattctcatcgtg
ctcacaaagatcctgccctgctaccccaaggtcctgaacctaggccaagccctggagtgt
cgagtccacaagatctgcctcgaggagaaggacaagaggcccgacctctatgccttagca
atgggttattcgggtcgattgaaaagccagaaggtgcacatggtccctgagaacgagttt
caccacaaggagcagccagcgcgcagtgccacccctgccagccaacagaacggtccaagc
agcactggaaagccggccagcacctcgagcaagacagaggaggggacgccagaggacgga
gatcggagcaaggataaatctcaggggactacaaagccagtgaacaaaaccaacagtgca
gcggccaaagtgaccaccagcaatgggaacggtgctctcaacagcaccaaagccgtgaaa
gaccgggacgacaaagagaagagcgggaaggacaagaaagagaaaaaggaaaagacacca
ggcagcactcctgagacaaaggcggagaaccggcgggaaaagcagagagacgaaagagcg
gggaaggaggagcgggcggcacgtgagggtaaggagaagacccccaaggcagacagggag
aaagtgaaagctgaggagaagagcagcaaagacgagaaggccaaagccggcaacggggag
ccagtggagccgtccagggagcgcgacgccatcaaggagtccaagagcaaggagaaagga
gaccggagtgctgcggctgggtccctcaagtcaccagttcccagatcagagtcagccgaa
tccgagagggatcacaaaagacgaaagctcgacagccactcttctccttcccactcgtcg
tctgttaaggacaataacaacgaacccaaggattccacatccaagcaccaccccaactac
aattcagtagcccggtccaagagcagagagagggagcaggagaagaaagagtcagacaac
acacaaggccgatccaaagagaagaaagaagagaaggatcgaaaagaaaggaaacgagac
cacgctgtcaatgatcgtgaggcgagccaagaaaccaaacgtaaaaaggacgagaacgga
accaattcctccaaaaacagcaagagcacgagtcccacctgtgactccccgctttcagct
gacaaagagaagagcaaaagatccaaatcttcgagtaaagagaaggcagattctgtgaaa
cctgagcggacgtcctctggagggaaaaaggagtctcgacatgacaaagagaaatctgag
aagaaagagaaaagggacagcagcggtggaaaggaagagaaaaagcaatatcctacaaat
gatactcataaatcttctgacaagcacagataa

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