Labrus mixtus (cuckoo wrasse): 132988225
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Entry
132988225 CDS
T10666
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03013
Nucleocytoplasmic transport
lmix03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132988225 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
132988225 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmix03019
]
132988225 (thoc2)
03041 Spliceosome [BR:
lmix03041
]
132988225 (thoc2)
Messenger RNA biogenesis [BR:
lmix03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
132988225 (thoc2)
Spliceosome [BR:
lmix03041
]
Complex C
Other components
EJC/TREX
132988225 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
132988225 (thoc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
132988225
NCBI-ProteinID:
XP_060911467
LinkDB
All DBs
Position
14:complement(16554512..16579028)
Genome browser
AA seq
1570 aa
AA seq
DB search
MATLILPGEWIKNWEKSGKHEFVQLCKELTEKTDHGSEVRDIQAALYELCWQVVQGNLKL
DLVASVLGDMMELRDDMPSILADVFSILDLETGALEEKNKRDHYTQLVGACLFFVPEAIL
KERLDPETLESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYGKLITELGQDL
SGNITSHVVLESIKSLIGCFNLDPNRVLDIILEVYESRSDQDEFFLSLIKSYMCEPLTLC
HILGFKFKFYQEPSEETPKSLYHIAAALLHHNLIELEDLYVHLMPLDAAIIEEHKRDISD
AKQIARKLVMVVLPSEKNEDKDKEKEKEEEKNEKAPDNQKLGLLEALLRIGDWHHAQSIM
DQMPSFYAASHKAIALALCQLVHLTVEPLYRRAGLPKGARGCVLQPLRSKRAPRPAETFE
DLRRDTFSMLGYLGPHLSHDPILFAKIVRLGKGFMKENQSDGRADYKDKMDTLLSCFLSI
ADQVLLPAISLMECNACMSEELWGLFKLFPYHHRYRLYGQWKNETYSSHPLLVKVKAQTV
ERAKYIMKRLTKENVKQSGRQIGKLSHSNPTILFDYMLSQIQWYDNLIVPVVDSLKYLTS
LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTN
QLKAGKSFDLLIMKEVVQKMAGIEITDEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDALLDHELALPLCLLMAQQRNGVVFLEGGEKHLKLVGHLYDQCHDTLVQFGGFLAS
NLSTEDYIKRVPSIDILCNQFHTPHDAAFFLSRPMYAHQILSKYDELKKAEKGNRQQQKV
HKYVAACEQVMTPVHEAVVSLHPARVWDDLRPQFYATFWSLTMYDLAVPNAAYDREVNKL
KVQIKAIEENPEIPMNKKKKEKERCTALQEKLQEEEKKQAEHVQRVLHRLKLEKDNWLLA
KSTKNETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSAIIY
TVASCTENESHRYGRFLCCMLETVTRWHSDRATYEKECVNYPGFLTIFRATGFDGGNKAD
QLDYENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLTKILPCYPKVLNLGQALEC
RVHKICLEEKDKRPDLYALAMGYSGRLKSQKVHMVPENEFHHKEQPARSATPASQQNGPS
STGKPASTSSKTEEGTPEDGDRSKDKSQGTTKPVNKTNSAAAKVTTSNGNGALNSTKAVK
DRDDKEKSGKDKKEKKEKTPGSTPETKAENRREKQRDERAGKEERAAREGKEKTPKADRE
KVKAEEKSSKDEKAKAGNGEPVEPSRERDAIKESKSKEKGDRSAAAGSLKSPVPRSESAE
SERDHKRRKLDSHSSPSHSSSVKDNNNEPKDSTSKHHPNYNSVARSKSREREQEKKESDN
TQGRSKEKKEEKDRKERKRDHAVNDREASQETKRKKDENGTNSSKNSKSTSPTCDSPLSA
DKEKSKRSKSSSKEKADSVKPERTSSGGKKESRHDKEKSEKKEKRDSSGGKEEKKQYPTN
DTHKSSDKHR
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacttatcctccctggtgaatggatcaaaaactgggaaaaatcaggaaaacac
gaatttgtacaactctgcaaagagctcacggaaaaaacagatcatggaagtgaggttaga
gatatacaggctgccttatacgagctttgctggcaggttgtacaagggaacctgaagttg
gatctcgttgccagcgtccttggggacatgatggaactcagagatgacatgccatcaatt
ttagcagatgtgttcagtatactagatttagagactggtgcgctggaagagaaaaacaaa
cgtgaccattacacacaactagtgggagcatgtttgttctttgttccagaggccatcctg
aaggagaggctcgatccagaaacccttgaatctcttggactcataaagcaagcccatcag
tttaatcagaagattgtaaaaatcaagactaaactattttataaacaacagaagttcaac
ttgctaagggaggagaacgagggctacggcaaactaatcactgagctcggccaggacctc
tctggcaacatcaccagccacgtcgttctggagagcataaagtccctcataggatgtttt
aacttggaccctaaccgtgttctggacattatcttggaggtgtatgagagcagatctgac
caggatgagtttttcctgtctctcatcaaatcatacatgtgtgagccgcttactctttgc
cacatcctgggcttcaagttcaagttctaccaggagccaagcgaggaaactcccaagtca
ctttaccacatcgctgctgctctgcttcaccataacctgatagagctggaagatctctac
gtacatctcatgccactagatgccgccatcatagaggaacacaaacgagatatctccgat
gccaagcagattgcccgcaaactggtcatggttgtgttgccttcggagaaaaatgaggac
aaagacaaggagaaggaaaaagaggaggaaaagaatgaaaaggctcctgataaccagaag
ctcggtctgttggaggcgctgcttagaatcggagactggcaccacgcccagagtattatg
gaccagatgccttccttctatgcagcttctcacaaggccatcgcgctggctctctgccag
ctcgtgcacctgactgttgagcctctttacagaagagcgggcctcccaaaaggggcacgt
ggatgtgtgctgcagccactgaggagcaagcgggcccctcggcctgctgagacctttgag
gaccttcgcagggacactttcagcatgctcggctacctgggccctcacctctctcacgac
cccatcctctttgccaagattgtgcgtcttgggaagggcttcatgaaagagaaccaaagt
gatggcagagctgactacaaagacaaaatggacacactgttgagttgtttcctgagcatt
gcagaccaggtgctactccctgctatctctctgatggagtgtaatgcttgcatgtctgag
gagctgtggggtctctttaaactctttccctaccatcacaggtatcggttatatggacag
tggaagaatgagacatactccagccatccactgttggttaaagtcaaagctcaaacagtg
gaacgggccaaatacattatgaagcggttgaccaaagagaatgtgaaacaatctggaagg
cagattggcaaactgagccacagcaatcccaccatcctgtttgattatatgctgtctcag
atccagtggtacgacaacctcatcgttcccgtggtggattctttaaaatacctcacatcc
ctcaactatgatgtcctggcctattgcatcattgaggctctggccaaccctgagaaggag
aagatgaagcatgacgacaccaccatctcctcgtggcttcagagtctggcaagtctgtgt
ggagccgtgttcagaaaatacccgatcgagctggctggccttcttcagtatgtcaccaat
cagctgaaggcagggaagagttttgaccttttgataatgaaagaggtggtgcagaaaatg
gccggcattgagatcactgatgagatgacctccgagcagttagaggccatgactggaggg
gagcaactcaaagccgagggtggctactttggccaaatcaggaacactaagaagtcttca
cagcgtctgaaggatgccctgctggaccatgaactggccctgcctttgtgtttactcatg
gcccagcaacgaaatggtgtcgttttcttagaaggtggagagaaacacctcaaacttgtg
ggccacctctatgatcagtgtcatgacactttggtgcagtttgggggctttttggcctcc
aacttgagcacagaggactacatcaagcgggttccctccattgacatcctttgtaaccag
ttccacactccacatgacgctgccttcttcctatctcggccgatgtatgcacaccagatt
ttgtcgaagtatgatgaactgaagaaagcagaaaagggcaacaggcagcagcagaaggtg
cacaagtatgttgcagcgtgcgaacaggtgatgaccccggtccatgaggcggtggtgtcc
ctacatccagccagagtgtgggacgacctccgacctcagttctacgccacgttctggtcc
ctcacgatgtacgacctggccgttccaaatgctgcgtacgatcgtgaggtcaacaagctc
aaggttcagatcaaggccatcgaggagaacccagagatacccatgaataagaaaaagaag
gagaaggaacgctgcactgccctgcaggagaaactgcaggaggaggagaagaagcaagcg
gagcacgttcaacgggttctacaccgcctcaagctagagaaagacaactggttgttggcc
aaatccacaaagaacgagacgataacaaagttcctgcagctctgtctgttccctcgctgc
atcttctcctccatcgacgctgtgtactgtgcccgctttgttgagctagtccaccagcag
aagacacccaacttctgcaccctcctgtgctacgacagggtgttctctgccatcatttac
acggtggccagctgtacggagaacgagtctcaccgctatggacgcttcctctgctgcatg
ctggagacggtgactcgatggcacagcgaccgagccacctatgagaaggagtgcgttaat
taccctggcttcctgaccatcttcagagccaccggctttgatggagggaacaaagcagat
cagcttgattatgagaacttcaggcatgtcgtgcacaagtggcactacatgctgacaaaa
gcttcagttcactgcctggagacgggagattacacccacatccgcaatattctcatcgtg
ctcacaaagatcctgccctgctaccccaaggtcctgaacctaggccaagccctggagtgt
cgagtccacaagatctgcctcgaggagaaggacaagaggcccgacctctatgccttagca
atgggttattcgggtcgattgaaaagccagaaggtgcacatggtccctgagaacgagttt
caccacaaggagcagccagcgcgcagtgccacccctgccagccaacagaacggtccaagc
agcactggaaagccggccagcacctcgagcaagacagaggaggggacgccagaggacgga
gatcggagcaaggataaatctcaggggactacaaagccagtgaacaaaaccaacagtgca
gcggccaaagtgaccaccagcaatgggaacggtgctctcaacagcaccaaagccgtgaaa
gaccgggacgacaaagagaagagcgggaaggacaagaaagagaaaaaggaaaagacacca
ggcagcactcctgagacaaaggcggagaaccggcgggaaaagcagagagacgaaagagcg
gggaaggaggagcgggcggcacgtgagggtaaggagaagacccccaaggcagacagggag
aaagtgaaagctgaggagaagagcagcaaagacgagaaggccaaagccggcaacggggag
ccagtggagccgtccagggagcgcgacgccatcaaggagtccaagagcaaggagaaagga
gaccggagtgctgcggctgggtccctcaagtcaccagttcccagatcagagtcagccgaa
tccgagagggatcacaaaagacgaaagctcgacagccactcttctccttcccactcgtcg
tctgttaaggacaataacaacgaacccaaggattccacatccaagcaccaccccaactac
aattcagtagcccggtccaagagcagagagagggagcaggagaagaaagagtcagacaac
acacaaggccgatccaaagagaagaaagaagagaaggatcgaaaagaaaggaaacgagac
cacgctgtcaatgatcgtgaggcgagccaagaaaccaaacgtaaaaaggacgagaacgga
accaattcctccaaaaacagcaagagcacgagtcccacctgtgactccccgctttcagct
gacaaagagaagagcaaaagatccaaatcttcgagtaaagagaaggcagattctgtgaaa
cctgagcggacgtcctctggagggaaaaaggagtctcgacatgacaaagagaaatctgag
aagaaagagaaaagggacagcagcggtggaaaggaagagaaaaagcaatatcctacaaat
gatactcataaatcttctgacaagcacagataa
DBGET
integrated database retrieval system