Labrus mixtus (cuckoo wrasse): 132989315
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Entry
132989315 CDS
T10666
Symbol
samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03250
Viral life cycle - HIV-1
lmix04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
132989315 (samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
132989315 (samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmix03400
]
132989315 (samhd1)
DNA repair and recombination proteins [BR:
lmix03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
132989315 (samhd1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
HD
PDEase_I
HD_assoc_2
Motif
Other DBs
NCBI-GeneID:
132989315
NCBI-ProteinID:
XP_060912848
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Position
15:17170197..17181746
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AA seq
623 aa
AA seq
DB search
MENRKRPFEGGLSPDESFKTPEKKVSAVRLQDSDYMHWGVEETCRYLRRENLGACEATFR
AQKITGVGLRYLEDSHLEKIGIESLGDRLRIIHSLRKLWQITAEPSKVFNDPIHGHVELH
PLLIKIIDTPQFQRLRNLKQLGGTYLVFPGACHNRFEHSIGVGHLAGRLVQALNERQPEL
LISHRDILCVQIAGLCHDLGHGPFSHMFDGMFIPRARPGISWKHETASLAMFDYLVNDNG
LMEEMKEHGLVLPEDLDFIKEQIGGPQGTEAAKGQKWPYKGRQEEKSFLYEIVANKRNGI
DVDKWDYFARDCYHLGIQNNFDYRRFLKFARVCDVEGRKLICTRDKEVGNLYDMFHTRNC
LHRRAYQHKVGHIIETMITEAFLKADKHIQVKGSGGKTFTLSTAIDDMEAYTKLTDYVFE
QILNSSSDELKEARQILRNIVYRRLYKCLGQTQADKPITVTQETLHHWEENLAKSIPQNG
PQDACLQPEDFVVRVINMDYGMKEQNPINNMRFYCKDDLTKAFQIRKNQVSKLLPEQFTE
QHIRAYCKKTDKKNLEAAKKLFVKWCMDMNFSKPQDGDIIAPELTPLKKSWSNTNEGEDG
GISSQGRSASANGQVKAKTKLFK
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccgtaaaaggccgttcgagggagggttgagccctgatgaaagcttcaaaacg
ccggagaagaaagtgtcagcggtccggctgcaggactcggactacatgcattggggagtc
gaggaaacttgtcgctacctgcgtagagaaaatctcggagcatgcgaagctacatttcga
gcacaaaaaatcacaggagtcggcctgaggtatctggaagacagccatctggagaagatt
ggcattgagagccttggtgaccggctgcggatcatacacagcctcaggaagctgtggcag
ataacagcagagccaagcaaggtgtttaatgatcccattcatggtcacgtggagttacat
cctctactcatcaaaatcattgacacgcctcagttccagagactacgaaacctcaagcag
cttggagggacctacttagtttttcctggagcgtgtcacaaccgctttgaacactcgatc
ggggtgggtcacttggcaggccgacttgttcaagctctgaatgagaggcagcctgaactc
ctcatctctcacagagacatcctctgtgtgcagatcgctgggctctgccatgacctgggg
catgggccattttcccacatgtttgatgggatgttcatccccagggcacgtccaggaata
tcctggaagcatgagaccgcctctctggccatgtttgactacctggtgaatgacaacggc
ctgatggaagagatgaaggagcatggcctggtgctgcccgaggacttggactttataaag
gaacagatcggtggaccacagggcactgaggcagctaagggccagaagtggccgtacaaa
gggcgtcaagaagaaaagtccttcctctacgaaattgtggccaacaaaagaaacggcata
gatgtggacaagtgggactactttgctagggactgctaccacctaggaatccaaaacaac
tttgactaccggcgcttcctgaagtttgccagggtgtgtgacgtggaggggcggaagctc
atctgcaccagagacaaggaggtgggcaatctgtatgacatgttccacacgaggaactgt
ctccacaggagagcctaccagcacaaagtgggccacataatcgagacgatgatcacagag
gcctttttaaaagcagacaagcacatccaggtgaaaggctcaggagggaagacgttcact
ctctccacagccatagacgacatggaggcctacaccaagctaacagattacgtgttcgag
caaatactcaactcctccagtgatgagctgaaggaggcgaggcagattctacgcaacatc
gtctatcgacgcctctacaagtgtctgggccagactcaggcagacaaaccaataactgtc
acccaggagacacttcaccactgggaagaaaatttggctaagtccatcccccaaaacggc
ccccaggatgcctgtctgcagccagaggactttgtagttcgtgtcattaacatggactat
gggatgaaggaacagaaccccatcaacaacatgcgattctattgcaaggacgaccttacc
aaagctttccagattcgcaagaatcaggtgtctaaacttctccctgagcagttcaccgag
cagcatatcagggcctactgcaagaagacggacaaaaagaacctggaggctgccaagaag
ctatttgtgaagtggtgcatggacatgaacttctcaaagcctcaggatggtgacataata
gctcccgagctgactcctctgaagaagagctggtcaaacaccaacgagggggaggatggt
ggtatttccagtcaaggacgcagtgctagtgcaaatggacaagtgaaagccaaaactaag
cttttcaagtaa
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