Labrus mixtus (cuckoo wrasse): 132989460
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Entry
132989460 CDS
T10666
Symbol
clstn1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
lmix Labrus mixtus (cuckoo wrasse)
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lmix04515
]
132989460 (clstn1)
Cell adhesion molecules [BR:
lmix04515
]
Cadherins
Cadherin related
132989460 (clstn1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
FAM176
Laminin_G_2
Toxin_R_bind_N
PRIMA1
EphA2_TM
V_ATPase_I
Cadherin_C_2
PFF1_TM
TMEM132_C
Motif
Other DBs
NCBI-GeneID:
132989460
NCBI-ProteinID:
XP_060913095
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All DBs
Position
15:complement(12551706..12588995)
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AA seq
981 aa
AA seq
DB search
MRFRGNTQFASAVGLVLGLLCAVEAAKVNKHKPWIETTYHGIVTENDDKVLLDPPLIALD
KDAPLRYAESFEVTLTEEGEICGFRIHGQNVPFEAVVLDKSTGEGVIRAKDKLDCELQKE
HTFTIQAYDCGEGPDGANMKKSHKATVHIQVNDINEYSPVFKEKSYKATVIEGKKYDSIL
KVEAVDADCSFQFSQICNYEIITPDVPFTVDKDGFIKNTEKLSYGKERMYKLTVTAYDCG
KNRASEDVLVKISVKPTCKPSWQGFNKRIEYEPGTGSLALFPSMHLETCDEPITSIRANI
ELETNHIGKGCDRDTYSEKSLHKLCGASTGTVELLPAPSSSSNWTVGLPTDNGHDSDQVF
EFNGTQAIKVPDGMVSTSLKEPFTISVWMRHGPGAQEKETILCNSDKTEMNRHHYSLYVH
NCRLILLLRQDPSEAENYKPAEFHWKLDQACDKEWHHYVLNVEFPTVSLFVDGTTFEPFL
VTEDYPLHASKIETQLTIGACWQDNSGHDNDTESVSEPTSGANARMAQFFRGNLAGLMIR
SGKLENKKVIDCLYTCKEGLDVQLPEEVASAVKVEFNPNQSSLTVEGDDIDALDKVMQHI
SYLNSRQFPTPGIRHLRISTTVKCFNEEACVSVPDAEGYVMVLQPEEPKISLSGIDHFAR
SAAEFESQEGVTLFPELRIVSTITREVEADTEAEAAEGADDDPTVQETVVSEEIMHNLDT
CEVSVVGDELDGEHESLELDVSQLQQHGLEMSSSNLGLVVTGVNTMANYEQVLHLIRYKN
WHTEALFDRKFKLVCSELNGRYISNDFKVEVNVIHTANPVEHANNAMVQPNFINPVHHAS
VDLSGHNLVNAHQASVVPSAATIVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQENGKEN
EMDWDDSALTITVNPMETYEDQHSSEEEEEEEEESEDGEEEDDITSAESESSEDEEGGEP
EDQQGASRQQQLEWDDSTLTY
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgcggttccgagggaatacacaatttgcatccgctgtcggactggtcctcggactatta
tgtgcggtggaggcagctaaagtcaataagcacaaaccatggatcgagacaacgtaccac
gggatcgtaacggaaaatgacgacaaagtactactagacccccctcttattgcattggac
aaggacgctcctcttcgctacgcagagagttttgaggtgaccctcactgaagaaggtgag
atttgcggcttcaggatccacgggcagaatgtcccctttgaggcagtggtcctggacaag
tccactggagagggggtcatcagggccaaggacaagttggactgtgagctgcagaaggag
cacaccttcaccatccaagcctacgactgtggagagggtcccgatggagccaacatgaag
aaatcccacaaggccactgtccacatccaggtgaacgacatcaatgagtactcacctgtg
ttcaaagagaagtcctacaaggccactgttatcgagggaaagaagtatgacagcatcttg
aaggtcgaagctgtggacgctgactgctctttccagttcagccaaatctgcaactacgag
atcatcacacctgatgtgcccttcaccgtcgacaaagacggcttcatcaaaaacactgag
aaactgagctacggcaaagaacgcatgtacaaactgaccgtgaccgcctacgactgtgga
aagaaccgagcctccgaggacgttctggtcaagatcagcgtcaaacccacctgcaaacct
agctggcaaggcttcaataagaggattgaatacgagcctggcacaggtagcctcgccctt
ttccccagcatgcacttggagacctgtgatgagccgatcacatccattcgagccaatata
gaactggaaacaaaccatattgggaagggctgtgaccgcgacacctactctgagaagtct
ctgcacaagctctgcggagccagcaccggcacagtggagctcctacctgcacccagcagc
tcctctaactggacagtaggactgcccactgataatgggcatgacagcgaccaggtgttt
gagtttaatggcacccaggccatcaaggttcctgatggcatggtgagcaccagcctgaaa
gagcccttcaccatctctgtgtggatgagacatggccccggggctcaagagaaggagacc
attctgtgcaactctgacaagacagagatgaacagacaccactactccctctacgtccac
aactgcaggctgatccttctcctgcgtcaggatccatctgaggccgagaactacaaacca
gctgagtttcactggaaactggaccaggcgtgtgacaaagagtggcatcactatgtgctg
aatgtggagttccccactgtgtcgctgtttgttgacgggactacatttgagcccttcctg
gttacagaggactatccactgcacgcctcaaagatcgaaactcagctcaccattggtgcc
tgctggcaagacaactcaggacatgacaatgacactgagtcagtctctgagcccacctca
ggcgccaatgccagaatggctcagtttttccgaggtaacctggctgggctgatgatccgc
tcgggcaagctggagaacaagaaggtgatcgactgtttgtacacatgcaaggaaggactt
gacgtacagctgcctgaggaggtagcctcagctgtcaaggtggaattcaaccccaaccag
tcctctctgaccgttgaaggcgatgacattgatgccttagacaaggtcatgcagcacatc
tcctacttgaactcccgccagttccccacgccaggcatcagacaccttcgcatctccacc
accgtcaaatgtttcaatgaggaggcctgtgtgtcggtgccagatgctgaaggttacgtg
atggtgctgcagcccgaagagcccaagatcagcctgagcggcattgatcactttgcccgc
agtgctgctgaatttgagagccaggaaggtgtgaccctgttcccagagctacgcatcgtg
agcaccatcacccgtgaggtggaggctgacaccgaggcagaagcagcagagggagctgat
gatgaccctacagtccaagagacagtagtgtcagaagagatcatgcacaacctggacaca
tgtgaggtgtctgtggttggagacgagctggatggggagcacgagagcctggagctggac
gtgtctcagctgcagcagcatggcctggaaatgagctcctctaacctgggcctcgttgtg
acaggtgtcaacacaatggccaactacgagcaggtcctgcatcttatccgttacaagaac
tggcacacagaggctctctttgacaggaaattcaaactggtctgctctgaactcaacggc
cgttacatcagcaacgacttcaaggttgaggtaaatgtaatccacacagccaatcctgtg
gagcacgccaacaatgccatggtgcagcccaacttcattaaccctgtgcatcacgcctct
gtggatctgtctggtcataaccttgtcaatgctcaccaggcctcagtggttcccagtgct
gccaccattgtcattgtggtgtgtgtcagcttcctggtgtttatgatcattctgggcgtg
ttccgcatccgcgccgcacaccagcgcaccatgagagaccaggagaacggcaaggagaac
gagatggactgggatgattcagcactcaccatcaccgtcaaccccatggagacgtacgag
gaccagcacagcagtgaggaggaggaggaagaggaggaggagagtgaggacggagaggag
gaagatgacatcacaagcgctgagtcagagagcagcgaagatgaggagggcggggagccg
gaggaccagcaaggggccagcagacagcagcagctggagtgggacgattccaccctcacc
tactag
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