Labrus mixtus (cuckoo wrasse): 132989468
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Entry
132989468 CDS
T10666
Symbol
exosc10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132989468 (exosc10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmix03019
]
132989468 (exosc10)
Messenger RNA biogenesis [BR:
lmix03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
132989468 (exosc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
132989468
NCBI-ProteinID:
XP_060913109
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Position
15:12102260..12112749
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AA seq
893 aa
AA seq
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MMAAVKKSDSTNRSLKETNSDTNDEENNELCPGFKDVDAFVKYGLGAVLSATKASAALPQ
AGDEYDFYRSFPGFQEFCESQGDKLLLCMSQIMQHHGCRSHMRDRNKLTGVEERFDLVVD
SNDVILERAGILLDEADGVNRSQQPVMPAGFQPPKIVVSSWNRKGLGSGSRSEMFRLLHA
KNVARPQLKFKEKIDNSNTPFIPKIFIKPNALKPLPSYFTNKQIRKQRPEDLDVPAALAD
LIHQQRTQEHVEDMFAHPYQYELNHLTVPESLLTKPEPQMYKPMADTKCSFIDSLEDLVA
LNEKLCKLSEFAVDLEHHSYRSFLGLTSLMQISTREDDFIIDTLELRSELYILNEAFTDP
AIVKVFHGADSDIEWLQRDFGLYVVNLFDTHQASRALNMARHSLDHLLKHFCSVDSDKRY
QLADWRIRPLPEEMVQYARTDTHYLLYIYDSMRAQLLDFNHGLPGLLQSVWSKSKDISLK
KYMKPIYTEESYLELQRKQKRSFNTQQLAAFRLLFAWRDKLARQEDESTGYVLPTHMMSK
VSEELPKEPQGIIACCNPVPPLVRQQVNELHLLVQQAREMPLLKAEIAAQKKKGLTPIKK
PEVTLFGPHDTSRVSESDLPAFPTDEPPVKQGVLFSDDEHRMDVDVQKTNGLMALAKITL
FEEMESHIDEEALPVPQMKARRIIESFENPFRMYLPSSDVHISKNAKFDPSSKIFEISKR
WKLQSIEQQQKEMEEKKKAKQEAKERAKKVSEERKKAKQSYQESLQNVATVRQQAVESAK
GVGQKRERVDGEVGELTPKPSKKLMKSAEKPQKTESPPKDSFKPFDYSQSDLKVFAGNKA
KDNTQFDPNRQSQDFKKKKINKGQKSNFAAGNRSMSYMAGKSDRGFRHNWPKR
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgctgtaaagaaaagtgattccactaacaggagccttaaagagacaaattca
gacaccaacgacgaggagaacaacgagctgtgtcccggtttcaaagacgtagacgccttt
gttaaatatggattgggtgctgtgttatctgccactaaggcgtccgccgccttgccacaa
gctggagatgaatatgatttctatcggagcttcccaggcttccaggagttctgtgaaagt
caaggggataagcttttactctgcatgagtcagataatgcagcaccacggctgcagatcc
cacatgagagaccggaacaagctgacaggggtggaggagcggtttgacttggttgtggac
tcaaatgatgtcattctcgaaagagcggggattcttcttgatgaagctgatggggtgaac
aggagccagcagcctgtcatgcctgcagggtttcagcctccaaaaattgttgtttccagc
tggaatcgcaagggtttaggctctggcagtcgttcagagatgttccgactgctccacgcc
aagaatgttgcgaggcctcagcttaaattcaaggaaaaaatcgacaacagcaacacacca
tttattccaaaaatctttatcaagcccaatgcgctgaagcctcttccttcttatttcacc
aacaaacaaatccgaaagcagagacctgaggaccttgatgttccagctgccctggctgat
ttgattcaccagcaaaggactcaggagcacgttgaagacatgtttgcacacccataccaa
tatgaactgaatcaccttacagttccagagagccttctgactaagccagagccccagatg
tacaaaccaatggctgataccaagtgctccttcatcgactcactggaggatttggtcgct
ctgaatgagaagctgtgcaagttgtctgaatttgcagtggacctcgagcaccattcctac
aggagtttcctcggcctcacttctctgatgcagatctccaccagagaggatgacttcatc
atcgacaccttggagctccgcagcgagctgtacatcctgaacgaggcgttcactgaccca
gctatcgtcaaggtatttcacggcgccgactctgacatcgagtggctccagagagacttc
ggcttgtacgtcgtcaacctttttgacacgcatcaggccagcagagctctgaacatggcc
agacattccctcgaccacctgctcaaacacttctgcagtgtggactcagacaagcgttat
cagctggccgactggaggattcgccccttgccagaagagatggtgcagtatgctcggaca
gacacccactatctcctgtacatatatgactctatgcgggcacagctgttagacttcaac
cacggcctgcctggccttctgcaaagtgtctggagcaagagtaaggacatctccctgaag
aaatatatgaagcccatatacacggaggagtcgtatttggagctgcagaggaagcagaaa
aggtcttttaacacccagcagctcgctgccttcagactgctgtttgcctggagggacaag
ctggccaggcaggaagatgaaagcaccggatatgtgctgcctactcatatgatgagcaag
gtatctgaggagctgccaaaagaacctcagggcatcattgcctgctgtaaccctgtaccc
cccctagtgaggcagcaggtcaatgagctccatttgttggtgcagcaagccagagaaatg
cctctccttaaggcggagattgcagctcaaaagaagaaaggactcacacccattaaaaag
ccagaagtcactttgtttggtcctcacgatacatccagggtctctgagagtgacctcccc
gcctttcccactgatgaaccacctgtgaaacaaggggtgctcttttcagacgatgagcac
aggatggatgttgatgtacagaaaacaaacggtctcatggcattggctaaaatcacactg
tttgaggagatggaatcacacattgatgaggaggccctccctgtgcctcaaatgaaagcc
agacgtatcatcgagtcatttgaaaacccattcagaatgtatttaccctccagtgatgtg
cacatcagcaagaacgccaagtttgacccatcctccaaaattttcgagatcagtaaaaga
tggaagctgcagagtatagaacagcaacagaaggagatggaggagaagaagaaagccaag
caagaagcaaaagaacgagccaagaaagtgtcagaggaaagaaagaaggctaaacagagc
taccaggagtctcttcagaacgttgctacagttcgccagcaagcagtggaatctgcaaaa
ggagtgggacagaaaagagagagagttgatggtgaggttggagagttaactcccaaaccg
agtaagaagctgatgaaatctgccgagaagccccagaaaacagaatcacctcccaaagac
agcttcaagcccttcgactacagtcagtcagacctcaaagtctttgctggtaacaaagca
aaggacaacacacagtttgatccaaaccggcaatcccaagattttaagaaaaagaaaatc
aacaagggacaaaaatccaattttgcagctggaaacagaagtatgtcatacatggctgga
aaatctgacagaggattccggcataactggcccaaaagataa
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