Labrus mixtus (cuckoo wrasse): 132989525
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Entry
132989525 CDS
T10666
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
lmix Labrus mixtus (cuckoo wrasse)
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GFIT
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NCBI-GeneID:
132989525
NCBI-ProteinID:
XP_060913198
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Position
15:4930852..4975574
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AA seq
2007 aa
AA seq
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MACPVQFFCRGLRTVGLVLLYYAFSIGITFYNKWLMKDFRYPLFMTLVHLTIIFCLSTLT
RRAMQLWTGKPRITLNWRDYLRKVAPTALATALDIGLSNWSFLFITISLYTMTKSSAVLF
ILFFSLVFKLEEPNPFLIVVVLLIASGLFMFTFESTQFNLEGFIMVLLASFIGGIRWTLT
QVLMQKAELGLQNPIDAMYHLQPLMFLGLFPLFLFNEGLSLSTSEKLFRVTELSPLLHSL
FTLSIGGLLAFGLGFSEFLLVSKTSSLTLSISGIFKEVCTLLLAASLMGDKMSLLNWLGF
AVCLCGISLHVGLKTYYSKSKGHSLRQLNSKSPELELPLLRQNGGEINDSAAEEDEEQEI
TLHCYGTASLLGFHPEQFRYKLMSKSCLHNQAELARVDIPTLECSCSVSEGRNVHAGSNQ
TPLMSLYLTSSSSSSSLCLMLRLLLSVLLLLSSGVHGQGRLKLTVLSEDRLQMKWKEAEG
PVQGYKVRVRPISEVPQPELMLTTTRGRATVAGLDSSQEYNLQVLVLNGTTEKLLAKRRF
TMEGLREEEMIRSGSRDQRKKILPGGSGSGDLDDVTEALLGLPTVLYPDPTTTAAATTAD
PPAEETPSQLPDETPETNPKEKRKRKKEKERDRTKMEKKEEQGTTQGKAAEEKPRKTTFP
TQPVTGISPRRPFECESNAAADVMLLVDGSWSIGRTNFRRVRDFLEGLMTPFHIGPNHIQ
IGLTQYSGDPRTEWQLNNFTTKDQLLEAVRNFRYKGGNTFTGQALLHVMEENMRPEAGAR
ADVPFFLVLLTDGKSQDDAIAAANRLKNAGVEIIAVGVKNADEAELRQVASEPVDLNVYN
VNDFPLLSKLVARLVHILCGRIEDRGVSKRMDPGPTADPALSYPSPMDLRFSELGSREVK
LHWTNPAKSVQQYRVVYHSAEGQSPQEVVLAGSESTVLLKDLSSQTLYHVSIFPVYEDNV
GLALRGTVTTLPLGMPTNLEVTPSSYSKLRVSWDAAPEATQYMILYSALNHGEPDDAKEE
KFRADQTVVELAGLLPSTDYSVTLYTLYDEDPSDPVTAVATTLPLPPPVSVSFPMVAHSM
MRVSWVPGAVDVPAHRIIYSTNHGSDVKQVDVTGLNSVMVQNLSSLSRYLVSVQSQYPQG
LSVALTSNITTLKVPPPSDLRVTNFSGSDITVRWEAAADDVVSYLIKWISLNSGDLRQLK
VSGESEGVILEGVEDDKEYQISLSALYGDGAQSEAVAIRYSTLSGGGPSSVSVSEETAVS
MVVTWIPPNAHVLQYRVSYTALTGAESQDRMVLVSGGERRVVLESLQPDTRYSILVTAEY
RNREGGSGSAQGKTTSLRVSSVSVVRSDHSSICVSWRAVSAVDGYRIVIQSVKDKQTKEE
TVDESTSSHCFSDLEPETLYRINVHSLLGSEEGSAVSILHPTASAPARIPISPRLYPIHN
EVCPEVTIRNSIVRGYDMMEAFGLTQKAHSSVDGVAAEPFVFNTLPTFTLYKDVQLTQST
KFIHPLGFSPEHTISIAFRLLQDTPREPFALWQLTDNDFQPMMGIVLDPTTKQLVYFSLD
YRGEVQKLSFDQRQVHRLFYGSFHKIHLSVSQVSVFLSVDCQLVGERPARPLGNLPTDGF
EMLGKLVKTRGPNSGSAPFQLQSFEIICNTTWATEDTCCDLPGVSDEESCPVPAYTCTCS
SDVPGAPGVAGQSGKPGPRGEKGEKGDQGQKGEVGPPGKPGLEGGLGPLGTIGPRGIAVS
GKVGPPGARGARGESGRPGLQGSPGPPGPKGEEGIPGPKGIRGVEGNMGGPGLTGPRGFQ
GMPGHPGPSGERGFSGPVGPTGLSGNKGERGEKGEPQSMAMIFQLVTQACEQLVHSEVLK
LDSFMNEMSRKPTPIEEPVGPPGEPGIPGPRGQPGSRGTQGNVGTRGRLGRAGYPGEQGR
RGPPGHKGDAGTNVQGPTGVKGFAGPPGESKLGTPGSKGEDGKQGPPGIPGPPGQPGEIG
PPGVCDSSGGCRGVPQQPEDQYYGYQP
NT seq
6024 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgccctgtccagttcttctgccgggggcttcgcactgttggattagttctcctt
tactatgccttctctataggcatcaccttctataacaaatggctgatgaaggatttccgc
taccccctcttcatgacgttggttcacctcaccatcatcttctgcctttcgactctgaca
cgaagggccatgcagttatggacggggaaaccacgcatcactttgaactggagagattac
ctccgtaaagtagcacccacagccttggcaacagcactagatattggactctccaactgg
agcttcctcttcatcaccattagcttgtacaccatgaccaagtcttcagctgtgctcttc
atcctctttttctccctggtcttcaaactggaggagccgaacccattcctgatcgtggtt
gtcctgctgatcgcctccggtctctttatgtttacgtttgagtcgactcagttcaacctg
gagggcttcatcatggtgctgctggcgtccttcataggggggatccgatggaccctcact
caggtcctcatgcagaaagctgagctgggccttcagaacccaattgacgccatgtaccac
ctacaacctctcatgttcctcggcctctttcccctcttcctgtttaatgaagggctcagc
ctcagcacttccgaaaagttattccgggtgactgagctttcccctctcctacattcactc
ttcacgctgagcatcggcggcttgctggctttcggtttgggcttctcagagttcctgctg
gtctccaagacctcaagcctcactttatccatatcagggatctttaaggaggtgtgtact
ctgcttttggcagcatctctgatgggagacaaaatgagcttgcttaattggctgggattc
gctgtgtgcctgtgcggcatttcattacacgtgggactgaagacatattattcaaaaagc
aaaggtcattctttaaggcagctcaacagtaagagcccagagcttgagttgcccttactg
cggcagaatggaggagagataaacgattcagctgctgaagaagacgaggaacaagagatc
actctgcactgctacgggacggcctcgcttctcggatttcaccccgagcagttcagatac
aagttgatgtcaaagagctgccttcacaatcaagcggaactggcgcgtgttgacatccca
accctggaatgctcgtgttcagtctctgaaggaaggaacgtgcacgcaggtagcaaccag
actccactcatgtctctgtacctaacatcatcatcatcttcatcatctctctgcctcatg
ctgaggttgctgctgagtgtcctgttgctgctctcctcgggggtccatggccaaggtcgt
cttaagctgacagtgctgtctgaagacagactgcagatgaaatggaaggaggctgaagga
cctgttcagggctacaaggtccgagtgagaccaatctcagaggtgccacagccagagctg
atgctgacgaccacaagaggtcgggcaacggtggcaggactggactccagtcaggaatac
aacctccaagtccttgttctgaatgggacgacagagaaacttcttgcaaagcgacgattc
accatggagggtctgcgggaagaggaaatgatccgcagcggtagccgagatcagaggaag
aagatattgccaggcgggtccgggtcaggagatctggacgacgtaactgaggcgctgctg
ggacttccaacagttctgtatccagaccccacaaccacagctgctgctactactgcagat
cccccagctgaagaaaccccctctcagctccctgatgagaccccagagacaaaccctaaa
gaaaagagaaaaagaaagaaagagaaggaacgagaccgtacaaagatggagaaaaaagaa
gagcaggggacgacgcagggcaaagcagccgaggagaaaccccggaagacaacgttcccc
acccagccagttacaggtatatctccgaggaggccatttgagtgtgagagcaatgcagca
gcggatgtcatgttgttggtggacggctcttggagcatcggacgcaccaacttcagacgg
gtcagagacttcttggagggcctgatgacaccctttcatatcggaccaaaccacattcaa
atcggtctgacccagtacagtggagatccacgcacagagtggcagctcaacaacttcacc
actaaagaccagctgttagaggcggtgaggaatttcagatataaaggaggaaacacattt
acaggtcaggcactgcttcatgtcatggaggagaacatgaggccagaggcaggtgccagg
gcagacgtaccgttttttctggtcttgttgactgatgggaaatctcaggatgatgccatt
gctgcggcaaaccggctaaagaacgccggtgtggagatcatcgctgtaggtgtaaagaac
gctgatgaagcggagttgagacaagtggcgtcggagccggtggatctgaatgtctacaat
gtgaatgacttccctctgctcagtaaactggtggcaaggctggtccacatcctgtgtggg
aggatagaggaccgtggagtctctaaacgaatggatcctggacctacagcagaccccgcc
ctatcttacccaagtcctatggatctacggttttcagaactgggctcacgagaggtgaag
cttcactggaccaatcctgccaagtcagtccaacagtacagagtggtctaccacagcgcc
gagggtcagagtccacaggaggtggtgttggccggctctgagtccacggtgcttctgaaa
gacctttcttctcaaacactgtaccacgtgtccatctttcctgtgtatgaagacaatgtt
ggcctggcgctacgaggaactgtcactacattgcctttgggcatgcctaccaacctggag
gtgactccttcctcttacagcaagctgagagtgagttgggatgcagcaccagaggcgacg
cagtacatgatcctgtactcagctctcaaccacggagagccagatgacgccaaggaggag
aaattcagggcggaccagacagtggtggagcttgcagggttacttccatcaacagactac
tccgtcactctttacaccctctatgacgaggacccgagtgatcctgtcactgctgtcgcc
accacactccctcttccaccaccagtaagtgtttcattcccgatggtcgcccacagtatg
atgagggtgagctgggttcctggagctgtggacgtccctgcccacagaatcatctacagc
accaaccatggcagcgacgtaaaacaggtggatgtaacagggctgaactcagtgatggtg
cagaacctgtcctctctctccagatatctcgtctcagtccagtctcagtaccctcaaggc
ctgtctgtggcactcaccagtaacatcaccacgttgaaggtgcctccaccatcagacctc
agggtgactaatttctcagggagtgacatcactgtgcgctgggaggctgcagctgatgac
gtcgtctcctacctcattaagtggatctctctaaacagcggagacctgagacagctgaag
gtgagtggtgagagtgaaggggtgatccttgagggagtagaagatgataaggaataccag
atctctctgtccgcactgtacggtgacggagctcagagtgaagctgtggccatacgatac
agcacattgtctggaggaggcccatccagtgtatctgtctctgaggagactgcagtcagc
atggtggttacctggataccccccaacgctcatgtcctgcagtatcgtgtatcttacact
gcgctaactggagccgaaagtcaggacagaatggtgttggtttcgggaggtgaaaggcgg
gtggtgctagagtcattacagccagacacacgttacagcatcctggtcaccgctgagtac
cgcaacagagaaggaggcagtggatctgctcagggcaaaactaccagtctgcgtgttagc
agtgtgagtgtggtcaggtcagaccactccagcatttgtgtgtcctggagagctgtgtct
gctgttgatggatatcgcatcgtcatccagtctgtcaaagacaaacaaacaaaagaagaa
actgtggacgagtctaccagcagtcactgtttcagtgatctggaaccagaaactctgtat
cgcatcaacgtgcactctcttcttggatcagaagaaggctctgccgtctccattctccat
ccaacagcttcagctccggctagaattcccatctctccgcggctgtatcctattcataac
gaagtctgccctgaagtcactatcagaaacagcattgtaagaggatatgacatgatggaa
gcttttggtctgactcagaaggctcactcttcggtggacggcgtggcagctgagcctttt
gtcttcaacactctgcccacattcactctgtacaaagacgtccaactgacacagagcacc
aagtttattcaccctttaggcttctctccggagcacaccatcagtatagccttccgcctg
ttgcaggatacacccagagagcccttcgccctctggcagctcactgataatgacttccag
cccatgatgggaatagtgctcgaccctacgaccaagcagctggtgtatttcagtctagac
tacagaggagaagtacagaaactaagttttgaccagcggcaggtccacagactgttctat
ggcagttttcacaagattcacctttctgtcagccaggtgagtgtgttcctttccgtggac
tgccagcttgtgggtgagaggcctgcccgccctctaggcaacctgccgactgacggcttt
gagatgctgggaaaactggtgaagaccagaggacccaacagtggatctgcaccgttccag
ctgcagtcctttgaaatcatctgtaacaccacctgggctacagaagacacctgctgtgac
ctgcccggagtgagcgatgaggagagctgtcctgtaccagcatacacctgtacctgttct
tctgatgtccctggagctcctggtgtagctggacaaagtggaaagccaggtcctcgcggt
gagaaaggcgaaaagggagaccaaggccaaaagggagaggtgggtcctccagggaagcct
ggactagagggaggtcttggacccctgggcaccatcgggccccgaggcatagctgtgtca
ggcaaagtgggtccaccaggtgcgagaggggcaaggggagagtctgggcgacctggactt
cagggctcaccagggcctccaggtccaaaaggtgaagagggtattcctggaccaaaggga
ataaggggggttgaaggaaacatgggtggacccggactcactggacccaggggtttccaa
ggaatgccaggacacccaggaccttcaggggaaagaggcttttcaggacctgtggggccg
acgggtctatcaggcaataaaggagaaagaggagaaaagggggaacctcagtctatggcc
atgatcttccaactggtcacccaggcctgtgagcaactagtgcatagtgaggtcctgaag
cttgatagtttcatgaatgagatgagtcgaaagcccactcctattgaagagccagtgggg
cctccaggagaacctggtataccagggcccaggggtcagccgggcagcaggggcacccag
ggaaatgtcggtacaagggggagactgggcagggctggatacccaggagaacagggaaga
aggggtcctccagggcacaaaggtgatgcagggacaaatgtccaggggcccacaggggtc
aaaggatttgcaggtcctccaggtgagtccaagttgggaactccgggctctaaaggagaa
gatggtaagcaaggacccccaggaatccccggacctcctggtcagccaggcgagatcgga
ccaccgggtgtgtgtgatagcagtggaggctgcagaggagttccccagcaaccagaagac
caatattatggctaccaaccttaa
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