Labrus mixtus (cuckoo wrasse): 132989547
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Entry
132989547 CDS
T10666
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
132989547 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmix03400
]
132989547 (xpc)
DNA repair and recombination proteins [BR:
lmix03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
132989547 (xpc)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
132989547
NCBI-ProteinID:
XP_060913222
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Position
15:4123530..4137254
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AA seq
934 aa
AA seq
DB search
MAKRKECEVTQADTKKLKVLKNSGAKARAKKEDTGSDITDKEETLKRKVQPKPHSSAKKA
AGNNSSSTASSTTAAVRTSKYFQSSVKKEDSDSDDFDMVTSRPPASKHKNAKKAENKEEE
EDEEEEEDSEESGDDWEEVEELSGPLGPVEPPEPVLPSQPVEIEIEIETPEVRKRQKRQA
EFENYLKRMVNRFKKDQLIDTHKVHLMCLIASGMFRNRLCREPDLLAITLSLLPPHYAMV
AKERIDQNYLSGLLKWFKATFTLNPSLPCEEHPDPWALLGRRLASLSAKNHQEMTHLLLL
VLRSLQLFCRLVLSLQPIPLKAPSAKSKGDKSPASAPGKSAKNTGKGTSKASPPESKVST
GTKRRAGGGKTKEDRGGKKAKTNRIKEEEDEKAIVSAGQRPKNSKRRSIASKVSYKEESN
SEEEKEEEGLSDEEFQASSEEDSAESESGAKSTKIGKRTVSTNKNTPASKKKSGGGNNQV
KEEDRKWENEEEDEEEIKSNTTKRRSGKKKEGPGADEWLEVFLDKTSSWVCVDVEHGVGM
PQLCSQNATAPVTYVVSVDNDGFVKDLGRKYDPTWMTSTRKRRVDEEWWEQTLEPFVGPE
DERDRKEEKELQNRLLNRPLPISVGEYKNHPLYALQRHLLKYEAIYPSSATVLGYCRGEP
VYSRDCVHTLHSKDTWLKEARTVRLGEEPFKMVRGFSNRSRKARMASELKEEKDLPLFGE
WQTEDYQPPLAVDGKVPRNDYGNVYLFKPCMLPVGCVHVRLNNLHRVAKKLDMDAAPAVT
GFDFHGGYSHAVTDGYIVCEEHEEILRAAWVEDQELQKQKEKEKREKRAISNWTLLVKGL
QIRERLKQRYGKKNQGLACLAQGEETGGLSSDEEDAAEDGSPGAKTASETLAMSWPQNRQ
AEEDGGSISGLKKKTTTKREKRGQEKHMFPFEKV
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaggaaagagtgtgaagtgacacaggccgatacaaagaaactgaaggtgttg
aagaacagcggagccaaagcaagagcgaagaaggaagacacaggtagtgacatcacagac
aaagaggagacgctcaagagaaaggttcaacctaaacctcattcctccgcaaaaaaagct
gcagggaacaactcgtcgtccaccgcatcctcaaccaccgccgctgtcagaaccagtaaa
tacttccagtcatctgttaagaaggaggactcggacagtgacgactttgacatggtgacg
tcaagaccacctgcatctaaacacaagaacgccaaaaaagcagagaacaaagaagaagaa
gaagatgaggaggaggaggaggacagtgaggagagcggggatgattgggaagaagtggaa
gagctgtctgggccgctgggtccagttgaacctccagaaccggtcctgccctctcagcct
gtggagatagagatagagatcgagactccagaagtcaggaaaaggcaaaagaggcaggca
gagtttgagaattatctgaagcggatggtgaaccggttcaagaaggaccagctgatagac
acgcacaaggtccaccttatgtgtctgatagccagtgggatgttccgcaaccgtctgtgc
cgcgaaccggacctgctggccatcactctgtcgcttctgccccctcactatgccatggtc
gccaaggagcgaatcgaccagaactacctctccggactactcaagtggttcaaagctacg
ttcactctgaaccccagtcttccctgtgaggagcatccagacccctgggctctgctgggg
aggcggctagccagtctgtcagccaaaaaccaccaggagatgactcatctgttactgctg
gtcctgaggtctctgcagctcttctgcagattggttctttctctgcagccgattcctctc
aaagccccatcagccaagagcaaaggggataaatcgcctgctagtgccccaggaaaaagt
gcaaagaacacaggcaagggaacctccaaggccagcccccccgagtcaaaggtatctaca
ggcaccaagagacgagcaggtggaggtaagaccaaagaagacagagggggaaagaaagct
aagacaaatagaataaaggaggaggaagatgaaaaggccatcgtgtcagcagggcagagg
ccaaagaactccaagcgtcgcagcatcgcctcaaaagtcagctacaaggaggagagcaac
agtgaagaggagaaggaggaggaggggcttagtgatgaggaattccaggcatcaagtgag
gaggacagtgcagagtcagagagtggagctaaatcgacaaagattgggaaaagaactgtg
tccaccaacaagaatactccagcttctaagaaaaagagtggtggagggaataaccaggta
aaggaggaggacaggaagtgggagaatgaggaggaagatgaagaagaaataaagagcaac
acaacaaagcgaaggagtgggaaaaagaaggaggggcctggagcggacgagtggttggaa
gtttttctggacaaaacgtcctcctgggtctgcgtggatgtggagcacggtgtcgggatg
cctcagctctgctcccagaatgcaacagcgcctgtgacgtacgtggtgtcagtggacaac
gacgggtttgtaaaggacctgggaaggaagtatgaccccacctggatgacatcgaccaga
aagaggcgggtggatgaagagtggtgggagcaaacactggagccctttgtgggacctgag
gacgagagggacagaaaggaggagaaggagcttcagaacaggctgctgaacagacctctg
cccatctcagtcggagagtacaagaaccacccgctgtacgccttacagagacacctgctg
aaatatgaagctatctacccgtcatcagctactgtgctgggatactgcaggggagagcct
gtgtactccagggattgtgtgcacacgctccactccaaagacacgtggctgaaagaagct
cggacggtcagactaggagaagagccgttcaagatggtgaggggcttctccaatcgttcc
cgtaaggccaggatggcgtctgagctgaaggaagaaaaagacctgcctctgtttggagag
tggcagactgaagactaccagccgcctctcgctgtggacgggaaggttcctcgtaacgac
tacggtaacgtctacctgtttaagccctgtatgttaccggtgggctgtgttcatgtgagg
ctcaacaatctgcaccgcgtggccaagaagctggacatggacgctgcccctgcggtcaca
ggctttgacttccatggaggatactcgcacgctgtgactgatggttacattgtgtgtgag
gagcatgaggagattctcagagcggcctgggtagaagatcaagagcttcagaaacagaag
gagaaagagaagagagaaaagagggcaatatccaactggactctgctggtgaaagggctc
cagatcagagagaggctcaagcagcgctacggcaaaaagaaccagggcctggcgtgcctt
gctcagggagaggagacgggtgggctatcttctgatgaggaggatgcggctgaagatgga
agtccaggagctaagactgcttcagagacgctggccatgtcctggcctcagaacagacaa
gcagaggaggacggagggagcatcagtggactgaagaagaagacgacaacgaaacgagaa
aagagaggacaggagaagcacatgttcccctttgagaaagtgtga
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