Labrus mixtus (cuckoo wrasse): 132989592
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Entry
132989592 CDS
T10666
Name
(RefSeq) LOW QUALITY PROTEIN: host cell factor 1-like
KO
K14966
host cell factor 1
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03083
Polycomb repressive complex
lmix04980
Cobalamin transport and metabolism
lmix05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
132989592
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
132989592
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132989592
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lmix01009
]
132989592
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmix03036
]
132989592
03029 Mitochondrial biogenesis [BR:
lmix03029
]
132989592
Protein phosphatases and associated proteins [BR:
lmix01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132989592
Chromosome and associated proteins [BR:
lmix03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
132989592
HMT complexes
COMPASS/SET1 complex
132989592
MLL-HCF complex
132989592
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
132989592
Mitochondrial biogenesis [BR:
lmix03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
132989592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
fn3
Kelch_2
Kelch_FKB95
Motif
Other DBs
NCBI-GeneID:
132989592
NCBI-ProteinID:
XP_060913275
LinkDB
All DBs
Position
15:complement(28587607..28601556)
Genome browser
AA seq
1665 aa
AA seq
DB search
METEPGTPAVLQPRWKRVLGWSGPVPRPRHGHRAVNIKELMVVFGGGNEGIVDELHVYNT
ATNQWFIPAVRGDVPPGCAAYGFVCDGTRLLVFGGMVEYGKYSSDLYELQASRWEWKRLK
AKAPKNGPPPCPRLGHSFSLIGSSCYLFGGLANDSEDPKNNIPRYLNDLYCLELRPGSSV
VGWEIPPTSGQPPPPRESHTAVVTSGRGNNRLIIYGGMSGCRLGDLWVLHIDSLTWSKPT
LNGTAPLPRSLHSATTINNKMYVFGGWVPLVMDDVKVATHEKEWKCTNSLACLNLDTMCW
ETVLMDSLEENVPRARAGHCSVAINSRLYIWSGRDGYRKAWNNQVCCKDLWYLETERPCA
PSRVQLVRANTSSLEVSWGPSQTADTYVLQLQKYDIPATPAVTSPAASTAPNLVPTATPV
ASFSNSPSPVATTLANQSGITLLPSPTAAVPASPLAAVAKAPAVLKVAAPGVGGGASFVT
VRQAAPKSPVAVTTLPAGVRMVVPAQAGQATSQGGSPQMSGMAALAAAAAATQKIPPSTA
AMLNVPAGATLVKTVSVSPGTKQGTPVTMVTNPATRILKTAAAQVGVASGVSTSGTPGRP
IITVHKSGTVTVSQQAQVVTTMVGGVTKTITLVNSSLGGGGSLIGNLGNLGNLGKMVVQT
KQVQSGAATGQTVSSPLTQFLQTKGSLPPGTILKLVTSADGKQTTLLSTAQAGSPKSTIL
GVAPGTGTKPGATIIKTIPMSALQGGAGTQTHTCTHLTCFISNRMTDSXAPPPPAGANSP
YTIFTTKMVTAGSAGKILTTVPKIGSGGQQGLTQVVLKGAPGTPGTILRTVPMGGVRLVS
PGAVGAKPNVTTLVVKGTSGVSSLGTVTGSISTAKPGGVVTSSLATPITTLATIATLAGK
VTATTAGPKQVTLITTPSGAESLVQDLPVSIMASPTSEEPGSTTSTTTTTSSTAGGESGD
TAGNTVTLVCSNPPCETHETGTTNTATVATAAMGGNNRECSNPPCEMHETGTTNTATTAS
ASMNQPPQIAGNTCSNPPCETHETGTTNTATTAGAGGLTQVRQHRSGFTYCLXLVEHECR
LSSVVSVCXVCSNPPCETHETGTTNTATTAGTGGLTQVCSNPPCETHETGTTNTATTAGT
GGLSQVCSNPPCETHETGTTNTATTATAQQEDSTDPSSSSDPPAPAPSTASQSRAVTTVT
QSTPTPGPSIPEISSLVGEGRAESSEAVAMVTESAEDGEEPMQTDSQPGHVMPTVLQVHM
EDSEAAQMTSDGGLPHELMSSEGDGGEGTTTLMVTGLTADQLAVTTGTDDAVQQATIQAV
LQAAGHMGEDQPIVLTQQDLAVLVQQQLQGIHNQPEPEPSSLPTEGLAPADSLNDPAAES
NGHELTSSAVTSAVARLASTFGPSPQLTASPVKIQTAALPAEVTNGNPAPAGKPTVVMRS
SVKDSQWYDVGIVKVTNMVVTHYYVPYGENMADDDSGVVPDYSQMKKVELQPGTAYKFRV
AGINICGRGAFSEVSAFKTCLPGFPGAPCAIKISKNMDGAQLTWEPPAVTSGKITEYSVY
LAIQSSQASSASGSGPAQLAFMRVYCGVSPSCLVQASSLANAHIDHTTKPAIIFRIAARN
QKGYGPATQVRWLQESSKEAKPAVKRAGASPDYKPVGPKKFKTDQ
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccgagcccgggacccccgcggtgctgcagccccggtggaaacgcgtcctgggc
tggagcggccctgtgccgcggccccgacacggacaccgagccgtcaacatcaaggagctg
atggtcgtgttcggaggaggaaacgaggggatcgtggacgaactccacgtctacaacaca
gctactaaccagtggttcatcccggctgttcggggtgacgtcccccccggctgtgctgct
tacggcttcgtgtgcgatgggacgaggctgctggtgtttggagggatggtggagtatggg
aagtacagcagcgacctgtacgaactgcaggcgagccgctgggagtggaaacgtctgaag
gccaaggctccaaagaacggcccgcccccctgcccccgccttggacacagcttctctctg
attggaagcagctgctacctgtttggaggactggccaatgacagcgaagaccctaaaaat
aacatcccaaggtacctgaacgacctgtactgtctggagctgcggccgggctccagcgtg
gtcggctgggagatccctccgacctcgggtcagcccccgccccccagagagagtcacact
gccgtggtgacaagcggccgcggaaacaacagactcatcatctacggaggcatgagcggc
tgcaggctgggagatctgtgggtgctgcacatagactctctgacgtggagtaaaccgacc
ctcaatggaaccgcaccccttcccagaagccttcactctgccaccaccatcaacaacaag
atgtacgtgtttggaggttgggttcctctggtgatggatgatgtgaaggtggcgactcat
gagaaggagtggaagtgtaccaactcactggcctgcctcaaccttgatacgatgtgctgg
gagacggtgctgatggacagtctggaggagaacgtcccgagagctcgcgctggtcactgc
agcgtggccattaactccagactgtacatctggagcggcagggacggatacaggaaggcc
tggaacaaccaggtgtgctgcaaggacctctggtacctggagacagagcgtccctgcgcc
ccctcccgggtccagctggttcgggctaacacgtcgtctttggaggtgagctggggcccg
tctcagactgccgacacctacgtgctgcagctacagaagtacgacattcctgccacacct
gctgtcacctcacctgccgctagcaccgcccccaacctcgtcccaacagccacacccgta
gcgagcttctcaaacagcccctcccccgtcgccacgacattagccaaccagtctggcatc
acactgctgccctcccccaccgccgctgttcctgcgagcccattggctgctgtagccaaa
gccccagcagtcctgaaggtggcagctccaggagtagggggcggagcctctttcgttacc
gtgaggcaggccgcacctaaatctccagttgccgtgacgacacttcctgcaggtgttcgt
atggtcgtacctgcccaggctggtcaagcgacgtcacaagggggcagtccacagatgagc
ggcatggcggcgttggcggccgcagctgcagcgactcagaagatccctccgtccacggcg
gcgatgctgaacgtccctgcgggagcaacgctcgtgaagactgtgtccgtgagtccagga
accaaacagggcacccccgttaccatggtaacaaacccagccacccgcatcctgaagact
gctgctgctcaggtgggcgtggcctctggagtctccacctccggcacccccggcagaccg
atcatcaccgtgcataaatcgggcacagtgaccgtctcccaacaggctcaggtggtcacc
acgatggtggggggagtcacaaagaccatcacactggtcaacagttcactgggaggaggc
gggtctctgatcggtaaccttggtaacctcggtaaccttgggaagatggtggtccagact
aaacaagtgcagagtggagcggcgactggtcagactgtgagcagccccctcacacagttc
ctgcagacgaaaggctccctcccaccaggaaccatcctgaagctggtgacatcggccgac
gggaagcagacgaccctcctcagcaccgcgcaggccggatcccccaaatccacaatcctc
ggcgtagccccgggaacaggcacaaaaccaggagccaccatcatcaagaccatccctatg
tctgctctgcaggggggggcaggtactcaaacacacacctgcacacacctgacatgcttt
atttcaaacaggatgactgacagttaagctcctcccccccctgcaggtgccaacagtcca
tatacaatcttcaccaccaagatggtcacagcaggaagtgccggaaaaatcctcacaacg
gtcccgaagattggctcaggaggccagcagggactcacacaggtggtgttgaaaggagct
ccggggacgccaggtacaatcctgaggactgtacctatgggcggagtcagactagtgtca
cctggagctgtcggcgccaaacccaatgtgaccacactggttgtcaagggaacctcaggt
gtgtccagtctggggacagtaacaggaagtatctccaccgcaaaaccaggaggagttgtc
acctcctccctggcaacgcccatcaccaccctagcaaccattgccacacttgctggcaag
gtcacagctacaacagctggacccaaacaggtgactctgatcacaactccaagtggtgcg
gagtctctagtccaggatctacccgtctccatcatggcgtccccgacttcagaagaacct
ggaagtactacaagcaccacgacaactacatccagtactgcgggaggagagagtggagac
actgcaggtaacacagtgacgttggtgtgctccaacccgccttgtgagacccatgaaact
ggcaccaccaacaccgccacagtcgccacagcagccatgggcggaaacaacagagaatgc
tccaacccgccgtgtgagatgcacgaaacggggacgaccaacaccgccacgaccgcctcg
gccagcatgaaccaaccgccgcagattgcagggaacacctgctccaacccgccctgtgag
acccatgagaccgggaccaccaacactgccaccacagcgggggcgggaggactcacacag
gtgagacaacaccggtcaggtttcacttattgcctctgattagttgaacatgagtgtaga
ctgagttctgttgtatctgtctgcnaggtttgttcgaaccccccctgtgagacccatgag
acagggaccaccaacaccgccaccacggcagggacaggtggactcacacaggtttgttcg
aaccccccctgtgagacccacgagacagggaccaccaacaccgccaccacggcggggaca
ggtggactctcacaggtttgttcgaaccccccctgtgagacccacgagaccgggaccacc
aacactgccaccacagccacagctcagcaggaagactccacagacccctcctcctcctct
gacccccctgcaccggccccctccacagcaagccagagcagagctgttaccacggttaca
cagtccacacccacccccggaccgtctatacctgagatctcctcattggttggagagggc
agggctgagtcgtctgaggctgttgccatggtaacagaatcagcagaagacggggaggag
cctatgcagaccgacagccaaccggggcatgtgatgccaacggtgttacaggttcatatg
gaggacagtgaggcggcacagatgacctcagacggcggtcttcctcatgagctgatgtca
tcagagggggatggaggggagggtacgacgaccctgatggtgacgggactcaccgcggat
cagctggccgtaaccacgggaacagacgacgctgtacagcaggcgacaattcaggccgtg
ctgcaggcagcgggacacatgggtgaggatcagcccatagttctgactcagcaggatctg
gcggttctggtacagcagcagcttcagggcatccacaaccaaccagaacctgagcccagc
agcctgcccacagagggccttgctccagcagacagcctgaatgaccccgcagcagagagt
aacggacacgagctgacgtcatcagctgtgaccagcgccgtggcccgattggccagtaca
ttcggccccagccctcagctgactgccagcccggttaagattcaaacagccgcgcttccc
gcagaggttaccaacggcaaccccgctcctgcagggaagcctaccgtggtgatgaggtca
tcagtgaaggacagtcagtggtacgacgtcggcatcgtcaaggtgaccaacatggtggtg
acacattactacgtcccctacggagaaaacatggccgacgatgactcaggcgtggtacct
gactacagtcaaatgaagaaggtggagcttcagccgggcacggcgtataagtttcgtgtg
gcggggataaatatctgcggccgcggagccttctcggaggtgtcggcttttaaaacatgt
ctacctggtttccccggagcgccctgcgccatcaagatcagcaagaacatggacggggct
cagctcacctgggagcctcctgccgtcacctcaggtaagatcaccgagtactcggtgtac
ctggccatccagtccagccaggcgagctcggcctcaggttctggtccggcccagctggcc
ttcatgagggtgtactgcggcgtcagcccgtcctgtctggtccaggcctccagcctcgcc
aacgcccacatcgaccacaccaccaaacccgccatcatcttccgcatcgccgcacgcaat
cagaagggctacgggcccgccacgcaggtcaggtggttacaagagagcagtaaagaagct
aaaccagctgtgaagagagccggagcatctcctgattataaacctgtcggaccaaagaag
ttcaaaaccgaccaatag
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integrated database retrieval system
