Labrus mixtus (cuckoo wrasse): 132989813
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Entry
132989813 CDS
T10666
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132989813 (herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmix04121
]
132989813 (herc3)
Enzymes [BR:
lmix01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
132989813 (herc3)
Ubiquitin system [BR:
lmix04121
]
Ubiquitin ligases (E3)
HECT type E3
132989813 (herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
132989813
NCBI-ProteinID:
XP_060913663
LinkDB
All DBs
Position
2:complement(24318916..24342676)
Genome browser
AA seq
1048 aa
AA seq
DB search
MLCWGNAKDGQLGIGAERNPMFEPRICHVFSDRGLKEVACGGQHSLFLLHDGSVYTCGSN
SCGQLGHDKPGTSPELVGALDTQKITMVSCGRTHSMAVNEQGQVFAWGAGEGGQLGLGTS
ETPVRIPRLVKRLCDHRISQVMCGNQHCIALSRDGQLFTWGQNTSGQLGLGKGESSKLFP
HPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDKQDRAVPCHIKFLRS
QKVVHISCGDEHTAALTKDGGLFTFGDGAWGQLGHGSTNNELLPRRVLELMGTEVSQITC
GRHHTLAFVPSSGVVYAFGCNSHGQLGTGIRGDARSPFPVKASFLTGNVHRTESKHYTVT
KIICGGDHSFLLYSTNQSFVAPEDFRVINVSKSLSPITYERLNSWRLKLMYSPDSSVTND
IIIQLSSTACWNASFLDQSDDTHFKTNPKIPGIDLNSVRMLFEALSRPAFSGLLEQASKS
FESLLIPQLPRSPPDVEAMRIYLILSEYPALLDSKNYIRLTIPLAMAILRLDANPSKVLD
NWWCFVDGSVFTRMVDMYKSIVVFMLTGGKTLLVPLFYENYFVATLRLLEKLHKVNLKAN
HVEYNRFYIPDITSLVDIQEDYLKWFLSKADIKVGSSPSQSDFPSVNLCAYPFILNAQAK
TTMLQTDAELQMQMAVSGANLHNVFMLLTLEPHLARNPYLVLHVRRNHLVSDTLRELTMY
SDVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPVYGMFTHYNESNLLWFSDKCF
VEQNWFHLIGIICGLAIYNSTVVDLHFPLALYKKLLDVSTTLEDFTELSPTEARSLQQLL
DYEGGDVEEVFLLNFAITRENYGMTEVKELVPGGESISVDRNNRKEFVEAYLRYVFTDSV
SEQYSAFSSGFLKVCGGEILLLFQPSELMAMVVGNNNYNWEELEKNAVYKGEYTATHPTV
RLFWEVFHEFPLEKKKQFLLFLTGSDRIPIHGMESLRIVIQSTTAEEHYLPVAHTCYNLL
DMPRYQTKDILRRRLTQAVEQYEGFSLV
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgttgggggaatgcaaaggatggacagttgggtatcggtgcagagaggaacccc
atgtttgagcccaggatttgtcatgtgtttagcgacaggggactaaaggaggtggcttgt
ggagggcagcactcgctgttcctgctgcatgatggtagtgtgtacacatgtggttctaac
agctgtggacagctgggccacgacaaaccagggacgtctccagagctggtaggagctctg
gacactcagaagatcactatggtgtcgtgtggtcggacccactctatggcggtgaacgag
cagggtcaagtgtttgcctggggggccggcgaagggggtcagcttggccttggcacctcg
gagacgcctgtgcgaataccaaggttggtcaagaggctgtgtgaccatcggatctctcaa
gtaatgtgtgggaatcagcactgcattgcactttctagagatggccagctgttcacgtgg
ggccagaacaccagcggtcagctcggtttggggaaaggagagtccagcaagctgttccct
catcccctcaagtctctggctggaattcctttggcacagataaccgccgggggagaccac
agctttgctctgtccttgtccggagcggtttttggatggggcaagaacaaagctggccaa
ctgggtctcaatgataaacaagatcgtgctgtcccgtgtcacatcaagttcttgagatct
caaaaagttgttcatattagctgtggggatgaacacacagcagcactcacaaaggatggc
ggcttgtttacatttggtgatggcgcgtggggtcagctgggtcatggctccaccaataat
gaacttttacccagacgagtgctggagctcatgggcactgaggtttcccagatcacctgt
ggcaggcaccacacgttggcgtttgtgccttcctctggtgtagtgtatgcgtttggctgt
aacagccatgggcagttgggcactggaatacggggtgatgccaggagcccatttcctgtc
aaggccagtttcctgactggaaatgtccatagaacagaatccaaacattatacagtgacc
aaaatcatctgtgggggagaccatagcttcttattgtactccactaaccagagttttgtc
gccccagaagacttcagagtgatcaacgtcagtaaaagtctctccccgatcacttatgaa
agattaaactcatggaggttaaagctgatgtacagccccgattcaagtgtcacaaatgac
atcatcattcaactctcatcaacagcttgttggaacgccagcttcttggaccaaagtgat
gatacacacttcaaaaccaacccaaagatcccgggcatcgatctcaactctgtcagaatg
ctttttgaggcgctcagcagaccggctttctccggactcctggagcaggccagcaagagt
tttgagagtcttctaatccctcagctaccacgctcccctcctgacgtcgaggccatgagg
atctacctcatcttgtctgagtacccggctctgctggactccaagaactacatccgcctc
actatccccctggcaatggccatcctccggctagacgccaaccccagcaaagtattggat
aactggtggtgttttgtggacggcagcgtgttcaccagaatggtcgacatgtacaagagc
atcgtggtgtttatgctgacaggaggaaagactctgctcgtacccctgttctacgagaac
tactttgttgccactctaaggctgctggagaaactccataaggtcaacttaaaggccaac
catgtggagtacaaccgcttttatatccccgacatcaccagcctggtggacatccaggaa
gactacctcaaatggttcctgagtaaagctgatattaaagttggatcatccccttcgcag
agtgactttccctccgtgaacctatgtgcctacccgttcatactgaatgctcaagccaag
acaaccatgctgcaaacagacgctgaactgcaaatgcagatggcagtaagcggtgcaaac
ctgcacaacgtctttatgctgctcacgctggaaccccaccttgccaggaacccatacttg
gtgcttcatgtgcgcaggaaccatttagttagtgacacattacgtgagctcaccatgtac
tccgatgtggatctcaagaaaccgcttaaggtgatcttcgatggcgaggaggccgtagac
gcaggcggagtaacgaaagagttcttcctgctgctgttaaaggagctaatggatcctgtc
tatgggatgttcacacattacaatgagtcaaacctgctctggttctcagacaaatgtttt
gttgagcagaactggtttcacttaatcgggatcatctgcggtctggccatctataactcc
acagtggtggacctgcacttccccctggctctctacaagaagctgctcgacgtgtcaaca
acgctggaggacttcacggagctctcgcccaccgaggccaggagtctacaacaacttcta
gactatgaaggaggcgatgtggaggaggtgtttcttcttaactttgctatcaccagggag
aactacgggatgacagaagtcaaggagctggtacctggaggagagagcatcagtgtggac
agaaacaacaggaaggagtttgtcgaggcctacctgcgctacgtgttcacagactcggtg
agcgagcagtactctgccttctcctccggcttcctgaaagtgtgtgggggggaaatcctg
ttgctgttccagccgtctgagctgatggccatggtggtcggcaacaacaactacaactgg
gaggagctggagaagaatgccgtttacaaaggggaatacacagccactcatccaacagtc
agattgttttgggaggttttccacgagttccctctggaaaagaagaagcagttcttattg
ttcctgaccggcagcgaccgtatcccgatccacggcatggagagcctgcgtatcgtcatc
cagtccaccacagctgaggagcactaccttccggtggcccacacctgctacaacctgctt
gacatgccccgctatcagaccaaagacatcctgcgtcgccgcctcacccaggccgtcgag
caatatgagggcttcagccttgtctga
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integrated database retrieval system
