Labrus mixtus (cuckoo wrasse): 132990272
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Entry
132990272 CDS
T10666
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lmix01009
]
132990272 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmix03019
]
132990272 (hdac6)
04131 Membrane trafficking [BR:
lmix04131
]
132990272 (hdac6)
03036 Chromosome and associated proteins [BR:
lmix03036
]
132990272 (hdac6)
Enzymes [BR:
lmix01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
132990272 (hdac6)
Protein phosphatases and associated proteins [BR:
lmix01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132990272 (hdac6)
Messenger RNA biogenesis [BR:
lmix03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
132990272 (hdac6)
Membrane trafficking [BR:
lmix04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
132990272 (hdac6)
Chromosome and associated proteins [BR:
lmix03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
132990272 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
132990272
NCBI-ProteinID:
XP_060914412
LinkDB
All DBs
Position
15:28713525..28730414
Genome browser
AA seq
949 aa
AA seq
DB search
MQSGSDPPGPGLKSVRRSPRLSPQCSSSGKGAEEKKGGSSLQEVKRRGRMERSGEEEELN
DRLQTLDLSCRSAASGTGVVYSEFFTHHKNLWEPSHPESPDRVKSIMEELQRQELLSHCT
TVQPREATEEELLLTHTKQYVDLMKSTQTMTEDDLHTLSDKYDSVYLHPETFQVCVSAVG
SVLQLVDQVMTSELRNGFAVIRPPGHHAQSDQANGFCVFNNVAIAARYARTTHSVSRVLI
VDWDVHHGQGIQYLFQDDPSVLYFSVHRHEGGAFWPHLPESDSLSVGGGRAEGRNINLPW
NKTGMTDADYIASFQQLLLPVAHEFQPQLVLVSAGFDAALGDQKGEMCVTPQCFHVLTHM
LMSLAEGRLVLALEGGYNLQATAEGAAACVRALLGGACPPLTPPTAPSDSALQSISQTVS
ALYPYWASLQTLEGGPLSEGHVIRAPINEQSTKPSSPAPSVTTTTGLVYDERMMEHMNMW
DRHHPEQPQRISKIFSKHQQLGLVKRCQRIPARLATEEELARCHSVQHIEQMKATAGMKP
RDLNKLGNEFNSIFFNNQSFTSALLAAGSCFNAVESILTGQVSNGVAIVRPPGHHAERDS
PCGFCLFNTAALAARHAQKISQGAPLRVLILDWDVHHGNGTQHMFEDDDSVLYISLHRYD
NGTFFPSSVDAAPNRVGVSKGAGFNVNVAWSGGRMGDSDYLAAFHRVIMPIATEFNPGLV
LVSAGFDAARGDPLGGYNVTPEGYAHFTHQLMSLAGGRVLVILEGGYNLTSISDSMAMCT
SVLLGDSPPSLVTPLPPPHHSAMATINQVIRHHAPYWRSLRIQIPESLRASLPSPKHRGK
RSSKGKGRKSDQSNADRPPLPPTGREDSTTEHSLDQLTQGLAGLDLSHNSAIHSPVTSTP
VGGARPKVRTSPEKVTCGGEVKTESDEVTPEQSQSGESPQPQPQVIRTF
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccggatcagatcccccaggacccggactgaagtcagtgagaagatctcctcga
ctgtcccctcagtgcagcagcagcggtaaaggagcagaggagaagaaaggagggagcagc
ctgcaggaggtgaagaggagaggcaggatggagaggagcggagaggaggaggagctgaac
gacaggctgcagacactggatctgtcctgtagatctgcagccagtggaaccggtgtggtg
tattcagagttcttcactcatcataagaacctgtgggagcccagtcacccagagagtcct
gacagagtgaagtccatcatggaggagctacaaagacaagagctgctgtctcactgcacc
actgtacagcccagagaggcgacggaagaagagctgctgctcactcacacgaaacagtac
gtcgatctgatgaagtcgacacagacgatgacggaggacgacctacacactctgtctgac
aaatacgactctgtgtacctccatcctgagaccttccaggtgtgtgtgtcggcggtgggg
tcagtcctccagctggtcgatcaggtgatgacctctgagctcaggaatggatttgccgtc
atcagacctccaggtcatcacgctcagtctgaccaggccaacggtttctgtgttttcaac
aacgtggcgatcgcagctcgatacgctcggaccacgcactccgtcagcagggttctgatc
gtggactgggatgtccatcatggtcaggggatccagtacctcttccaggatgaccccagt
gtgctgtacttcagtgtccacaggcatgagggcggggctttttggccacacctcccagag
tctgacagtctgagtgttggcggaggacgagctgagggcagaaacatcaacctgccctgg
aacaagacgggaatgaccgacgctgattacatcgcttcttttcaacagctgttgctacct
gtagcccacgagtttcagcctcagctggtcctggtctctgccgggtttgatgctgcactc
ggagatcagaagggggagatgtgtgtgactcctcagtgtttccacgtcctcactcacatg
ttgatgagtttggcagaaggtcgactcgttctcgctctcgagggaggttataacctgcag
gcgacagcagagggcgctgcagcctgtgtcagagctctgctgggaggagcctgtcctcct
cttactccgcccaccgctccgtccgacagtgctctccagtcgatctctcagaccgtctct
gctctgtatccatactgggcctccttgcagaccctcgagggcggtccgttgtccgagggg
catgtcatcagagcacctatcaatgagcagagcacgaaaccgtccagccccgccccctcc
gttaccacgacaacaggtctggtttatgacgagaggatgatggagcacatgaacatgtgg
gacagacatcatcctgaacagcctcagagaatctctaagatcttctccaaacatcagcag
ctgggattggtcaaacgttgccaacggataccagctcgtctagcaacagaggaggagctg
gccaggtgtcacagtgtgcagcacattgagcagatgaaggccacagcagggatgaagccc
agagatctgaacaaactgggaaacgagtttaactcgatcttcttcaacaaccagagcttc
acgtccgctctgctggctgcaggaagctgcttcaacgctgtggagagcatcctcacagga
caggtgagtaacggtgtggcgatcgttcgtcctcctggtcatcatgctgagagagactct
ccctgcggtttctgtctcttcaacaccgcagcgctcgctgctcgccacgctcagaaaatt
tcccagggtgcaccgctgcgagtcctaatcctggactgggacgttcaccacggcaacggg
acacagcacatgtttgaagacgatgacagcgtcctctacatctccctccatcgctatgac
aacgggacattcttcccgtcgtcagtggacgcagccccaaacagggttggcgtgtccaag
ggggcggggtttaatgtgaacgtggcgtggagcggagggaggatgggcgactcagactac
ctcgctgcctttcaccgagtcattatgccgatcgccaccgagtttaaccccggcctggtt
ctggtgtcggccgggttcgatgcagctcgcggggatccgctcggtggatataacgtgact
ccagagggatacgcccactttacacaccagctgatgtcactggctggggggcgggtccta
gtcatactggagggcggttataatctgacgtccatctctgactccatggcgatgtgcacc
agcgtgttgctaggagactctcctccctccttagtgacgcctctccctcctccccatcac
agcgccatggcaacgataaaccaagtgatccgacaccacgccccctactggaggtccctg
aggatacagattccagagtctctgcgggcatccctgccctcaccaaagcatcgtgggaaa
cgtagttccaaaggaaaaggcaggaagtcagatcagagcaatgcagacagaccacctctg
ccccctacaggacgggaggactcaacgacggagcacagtctggatcagctcactcaggga
ttggccggtttggacctcagccataactcagccattcacagccctgtcacgtccacacca
gtgggcggggccaggccgaaggtccgcaccagcccagagaaggtcacctgtggaggtgaa
gtgaagacggagtcagatgaagtgacacctgagcagagccaatcaggagagagcccacag
cctcaacctcaggtgatcaggacgttttag
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