Labrus mixtus (cuckoo wrasse): 132990439
Help
Entry
132990439 CDS
T10666
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04120
Ubiquitin mediated proteolysis
lmix04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132990439 (ube4b)
04120 Ubiquitin mediated proteolysis
132990439 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmix04121
]
132990439 (ube4b)
Enzymes [BR:
lmix01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132990439 (ube4b)
Ubiquitin system [BR:
lmix04121
]
Ubiquitin ligases (E3)
U-box type E3
132990439 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
132990439
NCBI-ProteinID:
XP_060914723
LinkDB
All DBs
Position
15:complement(12521114..12540691)
Genome browser
AA seq
1374 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPSTPLSTPLTSPQRETPPGPLPGPSGAASQPLPPAA
SQSLGLNVHSGTPATSPMGTSGVAYGSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDID
TASCEKSMSQVDVDSGIENMEVEDSDRREKRNLTEKDMSANSDVSEEQALQLICKILRVS
WKEQDRDVIFLPSLAAEFHQNPKDVYSDFKDLIGQILMEVLMMSTQSRVQNPFASLTATS
QPIAAAKSPDHRLTLVPPSSQGGSPMGPSAGSFGASSLSSLYGCGSPHTMALDASKTSSA
SLPTPSTPSIPQFIVPPSPPAIAPPRQTLNPPSAPMPISQRYRPYSVSSPWGTSSPSSPG
HRGFSFFGPSPGPAGLAVPPNTPVPVPPPSPQSLSLSSPRAHNPPSTPTSPAVPPSPRSH
THQTAFAARIPPSSPLSSLFFALSDMSQDSSDEESEEEDFARVQFGSSLGACGGSMSCDS
TSDRFTIETCKETEMLNYLIERFDSVGMEERKAPKVKMCSQPNVSQLLSNIRSQCISNVA
LVLQGTLTQPRSPLEQSLLVPYMLCRNLPYGFIQELVRITHQEEEVFRQIFIPILHGLAL
AVKECSFDSDNFKFPLMALAELCEIKFGKTHPVCSLATTLPLWCTKPLSPGCGREIQRLS
YLGAFFSLSVFAEDDAKVGDKYFSGPAITIENTRVVSQSLQHYLESARGDLFKILHNILL
NGETRESALNYMAALVNYNVKKAQMQTDDKLVSADGFMLNFLWVLQQLSMKIKLETVDPY
YIFHPRCRLVVSSEETRLKATMEELKCWITELHEDPTKFSEPKFPTECFFLTLHTHHLSI
LPGCRRYIRRLRAIRELNRTVEELKNSENQWKDSPLASRHREMLKRCKTQLKKLVRAKAC
ADVGLLDENLLRRCLQFYSTVIQLILRMVDSAYPNIMLPLNPEIPKSFAALPEFYIEDVA
EFLLFVVQYSPQVLYEPCVQDIVTFLVVFICSQNYIRNPYLIAKLVEVLFVTNPAVQPRT
QRFSEMMENHPLSIKQLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNLAH
HGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWEQLPREQQ
QSRQSQLTQDERVSRSYLALATETVEMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLC
GPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFEEVISK
MRKAGIKSSIAIEKFKLLLEKVEEIVAKNSQSEMDYSDAPDEFKDPLMDTLMTDPVILPS
GNIMDRSIILRHLLNSPTDPFNRQPLTESMLESVPELKERIHTWMREKQGGRLV
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttgagcgcagatgagattcgtcgaaggcgattggcacgactggcaggggga
cagacatcacagcccagtaccccgctcagcacacccctgacatcccctcagagagaaact
ccccctggacccctccctggaccctcaggtgccgcatcccagcccctgccaccagctgcc
tctcaatcattggggttaaatgtccacagtggtacccctgccacatccccaatgggcact
tctggggtggcatatggtagtcagagcagtgagggtgtgagctccctctccagctccccc
tccaacagcctggagactcagtcccagagcttgtcccgatcgcagagcatggacattgac
actgcctcctgtgaaaagagcatgtcccaggtggatgttgactcagggatcgagaacatg
gaggtagaggacagcgatcgaagggagaagaggaacttgactgaaaaggacatgtcggca
aactcggatgtctcagaagaacaggctctgcagctcatctgtaagatcctccgtgtatcg
tggaaggagcaggatagagatgtcatctttctcccttcactggctgcagagttccaccag
aaccctaaagatgtatactccgacttcaaagacctgatcggtcagatcctcatggaagtc
ttaatgatgtccacacagtctcgtgtccaaaacccctttgctagcttaaccgccacctct
cagccaattgcagcagccaaatcccccgaccaccgtctgacactggtgccgccctccagt
caaggtggcagccccatgggccccagtgcaggatcctttggagccagctctctttccagt
ctgtatgggtgtggtagtcctcacacgatggctttggatgcatccaagacgtcctctgca
tctctccccaccccatctacaccttctatcccacagttcattgttcctcctagcccacct
gcaattgcccctccaagacaaactctcaacccaccatctgcccccatgcccatctctcag
cgttataggccttactctgtcagctctccctggggcacttcttccccttccagccctggt
cacagaggctttagtttctttggaccctctccaggccctgcagggctcgctgtacctccc
aacaccccagttcctgtgccaccaccaagcccccagtccctttctttgagctcacctagg
gctcacaaccctccctccacccccacctctcctgcagtgcccccttctcccagatcacat
actcatcagactgcctttgctgcaaggattccaccatctagccccttgtcgtccctattc
tttgccctctctgacatgtctcaggacagcagtgatgaagaatctgaggaggaggatttt
gcacgggttcagtttgggtccagtcttggtgcatgtggagggtcgatgtcctgtgactca
accagtgaccgcttcactattgaaacttgcaaagagacagagatgctgaactacctcatt
gagcgttttgacagtgttggcatggaggagagaaaagcccccaaggtaaagatgtgtagc
caaccgaatgtcagccagcttctcagcaacattcgctctcagtgtatttccaatgtggcc
ctggtcctgcaaggcacactgacccagccacggagtcctctggagcagtctttgcttgta
ccctacatgctgtgccggaaccttccttatggcttcattcaggagctggtgcgcattacc
caccaggaggaagaggtgtttagacagatcttcatccccatcctgcatggacttgctctt
gcagtgaaagaatgttcctttgacagtgacaactttaaattccctcttatggcattagct
gagctttgtgaaatcaagttcgggaagactcacccagtttgcagtttggcaacgacgctg
cctctctggtgtaccaagcctctgagccctggctgtggaagagagatccagagactgtcc
tacttaggcgctttcttcagcctctctgtgtttgctgaggatgatgccaaagtaggagac
aagtatttctctgggccagctatcactatcgagaacacacgagttgtcagccaatcattg
cagcattacctggagtctgcaaggggtgacttgtttaaaattcttcataacatcctgcta
aatggagaaaccagagagtcagctcttaattacatggcagctttagtcaactacaatgtg
aagaaagctcagatgcagacggatgataagctggtgtctgcagacggcttcatgctcaac
ttcttatgggtgctgcaacagctgagcatgaagatcaagctggagacagtggacccctac
tacattttccatccacggtgtcgcctggttgttagctcggaggaaactcgtctgaaagcc
accatggaggagctcaagtgctggataactgaactgcacgaagaccctactaagttctca
gagcccaagttccctacagagtgcttcttcttgacgctgcacacccaccacttgtccatc
ctacctggctgcagacgctacattcgcaggttgcgagccatacgagaactaaataggact
gtagaggagctgaagaatagtgaaaaccaatggaaagattctcccctggctagtagacac
agagagatgctcaagcgatgcaaaacccagcttaagaaactggtgcgagccaaagcttgt
gctgacgtgggccttctggatgaaaacctgctccgcagatgtctgcagttctacagcact
gtcattcagctcattctccgcatggtggattctgcctaccccaacattatgctgccactg
aaccctgagattcccaaaagctttgctgctctgcctgagttctacattgaagatgtggcc
gagtttctcctttttgtcgtgcagtactccccccaggttttatatgagccctgtgtacag
gacattgtcaccttcttggtggtgttcatctgcagccagaactacatcaggaacccctac
cttattgccaagttggtggaggtgctgtttgtaaccaaccctgctgtacagcctcgtact
caaagattctctgaaatgatggagaaccacccgttgtctatcaaacagctggtccctgcc
ctcatgaaattctacactgatgttgagcataccggcgccaccagcgagttctacgataag
ttcactataaggtaccatatcagcactattttcaagagtctttggcagaacctggcccac
catggcaccttcatggaggaattcaattctggcaagcagtttgtgcgctacatcaacatg
ctgataaacgacaccaccttcttgttagacgagagcctcgagtccctgaagcgtatccac
gaggttcaagaagagatgaaaaacaaagagcagtgggaacagttgcccagggagcagcag
cagagccggcagtctcagctgactcaggatgagcgggtgtctcgctcttatttggccctg
gctacagagacggttgaaatgtttcacatactcaccaagcaggtccagaagcctttcctc
aggcctgaacttgggcctcgtttagctgccatgctgaactttaaccttcagcagctctgc
gggcccaagtgtcgcgatctgaaggtggagaacccggagaagtatggctttgagcccaag
aagctcctagaccagctaactgacatctacctgcaactagactgtgcccgctttgctaag
gctattgcagatgaccagcggtcgtacagccgcgagctctttgaagaggtgatatcaaag
atgaggaaggctggtattaagtcctcaattgccattgagaaattcaagctgcttttggag
aaggtggaggaaatagtcgccaagaactcccagtctgaaatggactacagtgacgcacct
gacgagttcaaagaccctctcatggacacactgatgaccgaccctgtgattctgccttcg
gggaacataatggaccgatccatcatcttgcgccacctcctcaactcccccactgatccc
ttcaacaggcagccgctcacagagagcatgctggagtcagtccctgaattaaaagagagg
atccatacctggatgagagagaaacaaggcggacgtcttgtctaa
DBGET
integrated database retrieval system
