Labrus mixtus (cuckoo wrasse): 132990607
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Entry
132990607 CDS
T10666
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
lmix Labrus mixtus (cuckoo wrasse)
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmix04131
]
132990607 (vps50)
Membrane trafficking [BR:
lmix04131
]
Protein recycling
Others
EARP complex
132990607 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
132990607
NCBI-ProteinID:
XP_060914919
LinkDB
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Position
16:complement(18501315..18610879)
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AA seq
995 aa
AA seq
DB search
MQKIKSLMARQGLKSPQESMADLSPVENLRIPSKEELRELREQPIDPQAEQEIIDSIEEV
YFSNDSFDMVQHELEKLPPELNLQELEEYRDKLKKQQAAVSKKVADLILEKQPAYVKELE
RVTALQTNLQLAAVICTNARRQLSVSKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKNFDVSHYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITLDSYIPCLMDLCKALWEVMLSYHRTMQWHEEHDKLETAPTPAV
DDTAAAESDESVVDRSYVKKKLEHGLTRIWQDVQLKVKAYILGTDMSNFKYDDFIVVLDV
ISRLMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRTRLEELRMFLENETWELCPVKSNF
NIAQLHEFKFMGQCRSPSVSPSRQAVSSTGLAQEELSLFQQYLQEGNPFEMHTEHKEEET
EDVLASNGYESDELEKSVYQDYDSDSDVPEELKQDYVDEQTGDAPLKSVSRETIRSKKKS
DYNLNKTNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFG
RNDMPVPSPSLPSHGGREVGAVRVVGPTCLYESSGLGLISSRLRTTLNRIQESLIDMEAV
GENTGVHGPAEDRKEKVPSPHLSQLVVLTNSGTLYGLAQRVVATESLVFLAEQFESLQSH
LDTMMPLAKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLMMAGVKWDIREIM
SQHNVYVDALLKEFEQFNKRLGDVSRHVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKC
SNEGRALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSM
KQLANLVNVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagattaagtctctcatggcccggcagggtctgaaaagcccccaagagagcatg
gcagaccttagccctgtggagaacctgaggatcccaagcaaggaggagttgcgggagctg
agggagcaacccatcgacccccaggcggagcaggagatcatcgatagcatcgaggaggtc
tacttctccaacgactcctttgacatggtgcagcacgagctggagaaactcccacctgag
ctcaacctgcaggagctggaagagtacagagacaaactgaagaaacaacaagcagcagtt
tcaaaaaaggttgcagatctcattttggagaaacagcctgcttatgtcaaggagctggag
cgagtgacagcattacagactaacctgcagctggcagcagtcatttgcactaatgcaagg
aggcaactaagcgtctcaaaggagggattcacagaagccagcctgggtctattagccaat
cagaggagacgacagctactgacaggcctgctgaagtcactaaggaccatcaagacgctg
caaagaacagatgtacgactcagcgagatgcttgaggaggaagactatccaggtgcaatc
cagctctgtctggaatgtcaaaaggctgccagcaccttcaaacactacagctgcatcagt
gaattgaattccaaactacaagacactctggagcaaatcgaggagcagcttgatgtcgcc
ctgtccaagacgtgtaaaaactttgatgtgtcgcactacaccaaggtccagctggcctac
acactcctcggcaagacacagactgccatggaccagctgcacatgcacttcacccaggcc
atacacaacactgttttccaagtcgtgctgggatatgtggagctgtgcgccggcaatgcc
gataccaagttccagaaaatgcaatacaaggatctttgtacgcatatcacactggacagc
tacataccatgcctgatggatctatgcaaggcattatgggaggtgatgctgagctaccat
cgcaccatgcagtggcacgaggagcatgacaaactggagactgcacccactccagccgta
gatgacacagcggcagcagagtcggatgagtcagtggtggaccgcagctatgtaaagaag
aagctggagcacggactgacacgcatctggcaggatgtccagttgaaagtgaaggcctac
atccttggcacagacatgtccaacttcaaatacgatgatttcatcgtggttctggatgtc
atcagcaggctgatgcaggtgggtgaggagttttgtggcagcaagtcagaggtcctgcag
gagtccatcaaacggcagagtgtcaactacttcaaaaactaccacaggacgcgactggaa
gagctgaggatgtttctggaaaatgagacgtgggaactgtgcccggtcaagtctaacttt
aacatcgcccagctccatgagtttaagttcatgggccagtgtcgctctccgtccgtgtct
ccgagcagacaggccgtatcctccaccggcctggctcaggaggagctgtctcttttccag
cagtacctgcaggagggaaacccctttgagatgcacactgagcacaaagaggaggagaca
gaggatgtgctggcatctaacgggtacgagtcagacgagctggagaagagcgtgtatcaa
gattatgacagcgacagcgacgtccccgaggagctcaagcaggactacgtcgatgagcag
acgggagacgcacctctcaagagtgtctcccgtgagaccatcagaagcaagaagaagtcc
gactacaacctgaataaaaccaacgcaccaatcctcaccaacaccaccctcaacgtcatc
cggcttgtcgggaagtacatgcagatgatgaacatcctgaagccgatcgccttcgatgtc
atccactgtgtgtcccagctgttcgattactatctgtacgccgtctacaccttctttgga
cgcaatgacatgcctgtcccaagcccatctttgccgtctcatggtggcagagaggtgggt
gctgtcagggtggtgggccctacctgcttgtatgagtcatcgggcctgggccttatcagc
agccgactgagaaccacactgaaccggatccaggagagtctcatcgacatggaggctgtg
ggggagaacacaggagttcacggtccggcagaggacaggaaggagaaggtacccagcccc
catctcagccaactcgtggtcctcactaacagcgggactctttacggactcgcccagcgg
gtggtggccactgaatctcttgtgtttttggcagaacaatttgaatccctacagtctcac
ctggacacaatgatgcctttagccaagaaacccttcctgcaacagttttattctcagacg
gtgtcgacagccagtgaactccgcaaaccaatctactggattgttgcagcgaaggccatc
gactacgaacaaatgttgctcatgatggcgggggttaaatgggacatcagggagataatg
tcacagcataatgtgtacgtggacgcccttttaaaggagtttgaacagttcaacaagcgt
ctgggagatgtttccagacatgtacgcatcccgctgcctgtgtccaatgttctgtgggag
cactgcatccgcctggccaacaggactctagtagaaggctatgctaatgtgaagaaatgc
agcaacgagggccgggccctgatgcagctggacttccaacagttcctcatgaagcttgag
aaactgaccgacctgcgacccatccctgataaagagttcgtggagacttacatcaaggcc
tactacttgactgagaacgatatggagcagtttatcaagaatcacagggagtactccatg
aagcagcttgccaacctggtgaacgtttgcctgggctcgcacataaataagaaggctcgt
cagaaacttctggcggccatcgatgacattgacagacccaagagatag
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