Labrus mixtus (cuckoo wrasse): 132990691
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Entry
132990691 CDS
T10666
Name
(RefSeq) polyadenylate-binding protein 1A-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03015
mRNA surveillance pathway
lmix03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132990691
09123 Folding, sorting and degradation
03018 RNA degradation
132990691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmix03019
]
132990691
03041 Spliceosome [BR:
lmix03041
]
132990691
Messenger RNA biogenesis [BR:
lmix03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
132990691
mRNA cycle factors
Stress granule specific factors
132990691
Spliceosome [BR:
lmix03041
]
Complex C
Other components
Complex C specific factors
132990691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_10
RRM_5
RRM_7
RRM_occluded
RBD_RDR6
RRM_3
YflT
HTH_58
PABC_AtC3H46
POP1_C
Motif
Other DBs
NCBI-GeneID:
132990691
NCBI-ProteinID:
XP_060915033
LinkDB
All DBs
Position
16:23431239..23437324
Genome browser
AA seq
634 aa
AA seq
DB search
MNPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGARAKEFTNVYVKNFGEDMDDEKLREIFNKYGHAMSIRVMTDDNGKSRGFGFVSFER
HEDAQKAVDEMNGKEMNGKLIYVGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKN
LDDGIDDERLRKEFTPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
KPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQAQNRA
AYYPAAGQMAQIRPSPRWATQGVRPQHFQNMPGTMRPSGPRPQTYGAMRPTSQVPRMMST
QRVAAQTMGPRPATAAAAAAAPVRGVPQYKYAAGVRNPTQHMTSQPQVNMQQPAVHVQGQ
EPLTASMLAAAPPQEQKQMLGERLFPMIQNMHPSLAGKITGMLLEIDNSELLHMLESPES
LRSKVDEAVAVLQAHQAKEAAQKTVTNSTGVPSV
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccagtgctcccagttaccccatggcctccctttacgtcggggatctgcatcaa
gatgtgactgaggccatgctttacgagaaattcagcccagccggagctatcctgtcgata
cgagtgtgcagggacatgatcacccggcgctctcttggatacgcctatgtcaactttcaa
caaccagcggacgccgagcgagcactggacaccatgaactttgacgtgatcaaggggcgg
cctgtgcgcatcatgtggtcgcagcgtgatccatcactgagaaaaagtggagtgggaaac
atctttatcaagaatcttgacaagtccattgacaacaaggctctgtatgacaccttctct
gcttttggaaacatcctgtcctgtaaggtggtctgtgatgaaaatggctctaaaggctac
ggctttgtgcattttgagactcaggaggcagccgaacgagccattgagaaaatgaatggc
atgcttctcaatgacaggaaagtatttgttggtcgcttcaaatctcgcaaagagcgcgag
gctgagctgggtgcccgagccaaggagttcacaaatgtctatgttaaaaactttggagag
gacatggatgatgaaaagctgagggaaatcttcaataaatatggacacgccatgagtatt
cgtgtaatgacagatgacaatggaaaatctagaggctttgggtttgtcagctttgagagg
cacgaggatgcccagaaggcagtggacgagatgaacgggaaagagatgaacggcaagctg
atctacgttggccgagcccagaagaaggtggagcgacagacggaactcaagcgcaagttt
gagcaaatgaaacaagaccgcatgactcgctaccagggtgtcaacttgtatgtgaagaac
cttgacgatggcattgatgatgaacgccttagaaaggagttcacgccattcggcaccatt
accagtgccaaggtcatgatggagggtgggcgcagcaaaggattcggctttgtctgcttc
tcgtccccagaggaagccaccaaagcggtgacagaaatgaatgggcgcattgtagccacc
aagccgttgtatgttgccctggcccagcgcaaagaggagcgacaagcccacctcaccaac
cagtacatgcagcgcatggccagtgtgcgtgcagtgccaaacccagtcatcaacccctac
cagccagccccaccctctggatacttcatggcagccatacctcaggcccagaaccgtgct
gcttactatccagctgctgggcagatggcccagatccgcccaagcccacgctgggccacc
caaggtgtccggcctcaacacttccagaacatgccagggaccatgcgtccctcaggaccc
cgccctcagacctatggggccatgagacctacctctcaggtgccccgcatgatgtccact
caacgtgtcgcagctcagacgatgggtccccgaccagctactgcagctgctgcagcagcc
gcccctgtgcgtggagtccctcagtacaagtacgctgcaggtgtccgcaacccaacccag
cacatgacttctcagccacaagtcaacatgcagcagcctgctgtccatgtgcagggacag
gagcctctgactgcctccatgcttgctgctgctccaccacaggaacagaagcagatgctg
ggtgagcgtttgttcccaatgatccagaatatgcaccccagcctggcagggaagatcact
ggcatgctcctggagattgacaactcagagctgctccacatgctggagtccccagagtct
ctccgttcaaaggtggatgaggctgtggctgtccttcaggcacaccaggccaaagaggct
gcccagaagactgtgacaaattcaactggtgtcccaagtgtctga
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