Labrus mixtus (cuckoo wrasse): 132990724
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Entry
132990724 CDS
T10666
Symbol
aptx
Name
(RefSeq) aprataxin isoform X1
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
132990724 (aptx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmix03400
]
132990724 (aptx)
Enzymes [BR:
lmix01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
132990724 (aptx)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
132990724 (aptx)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
132990724 (aptx)
DNA repair and recombination proteins [BR:
lmix03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
132990724 (aptx)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
132990724 (aptx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
FHA_2
zf-C2HE
HIT
zf-C2H2_6
FHA
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
132990724
NCBI-ProteinID:
XP_060915083
LinkDB
All DBs
Position
2:26313563..26316714
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AA seq
332 aa
AA seq
DB search
MPICWLISDEGNHKPIRLPHLQAVILGRGPETTIKDKKCSRHQVEVKAECNKGYVKVKQL
GLNPTSVDSAVVGKGNEVKMRPGQQLHIVNQLFPYTVQFREDPAGDHGRSRRPREPSEDK
KCDREAPSPKVAKQTEKQSVPLQKEEATKSSESFGHWSQGLKTSMQDPKMQVYKDDKVVV
IKDKYPKARYHWLVLPWQTISSLKVLRGEHTDLLKHMQQVAEQMVQQCPHKSSLRFRKGY
HAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFTTDYFIESHDVIQMLETDGKVAVTEGTS
ELLKLPLRCHMCRKELPTIPALKEHLKSHFPS
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcccatttgctggcttatcagcgacgagggcaatcataaacccatcagactgcctcat
cttcaggcagttattctgggtcgaggtccagaaacgacaattaaagacaaaaagtgctcc
aggcatcaagttgaagtgaaagcagaatgcaacaaaggatatgtcaaagttaaacagttg
ggcttgaaccccacgtccgtagactctgcggtggttggtaaaggcaatgaggtcaaaatg
aggcctggacagcagcttcatattgtcaatcagctcttcccatacactgttcagttcagg
gaggatcctgctggggatcatggccgctccagaagaccacgagagccttcagaggacaaa
aagtgtgacagagaggctccgagtccaaaagtagctaaacaaacagaaaagcaatctgtg
cccctccaaaaggaagaagccacaaaaagcagtgaaagttttggacactggagccaaggt
ctgaagacatcaatgcaggacccaaagatgcaggtgtacaaggatgataaagtagtggta
atcaaagataaataccccaaagctcgctaccattggctggtcctgccatggcagaccatt
tccagtctgaaggtgttacgtggggaacacactgacctgttgaaacacatgcaacaggtt
gctgagcagatggttcagcagtgtccacataaaagctcactacgctttcgcaaagggtac
catgccatccccagtatgagtcatgttcatctccatgtgatcagccaagactttgactct
ccgtgtttaaagaataaaaaacactggaactctttcacaactgactatttcattgagtca
catgatgtgattcagatgcttgaaacagatggaaaggttgccgtcacagaaggaaccagt
gagttgctgaaactacctctccgctgtcacatgtgccgaaaagagcttcccactatacca
gctctgaaggaacacctgaagtctcactttcccagctag
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