Labrus mixtus (cuckoo wrasse): 132990930
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Entry
132990930 CDS
T10666
Name
(RefSeq) E3 ubiquitin-protein ligase RING2-A-like isoform X1
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
132990930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmix04121
]
132990930
03036 Chromosome and associated proteins [BR:
lmix03036
]
132990930
Enzymes [BR:
lmix01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132990930
Ubiquitin system [BR:
lmix04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132990930
Chromosome and associated proteins [BR:
lmix03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
132990930
Noncanonical PRC1 (PRC1.1)
132990930
Noncanonical PRC1 (PRC1.3/1.5)
132990930
Noncanonical PRC1 (PRC1.6)
132990930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-Nse
zf-C3HC4_4
zf-RING_6
RING_XB3-XBAT31
zf-RING_4
zf-RING_5
zf-rbx1
zf-UDP
TRAF3_RING
zf-C3HC4_5
DUF6555
Sina_RING
Motif
Other DBs
NCBI-GeneID:
132990930
NCBI-ProteinID:
XP_060915402
LinkDB
All DBs
Position
16:12910159..12919528
Genome browser
AA seq
398 aa
AA seq
DB search
MAAPVNIQAPSKTWELSLYELHRSPQEAIVDGTEVAVSPRALHSELMCPICLDMLKNTMT
TKECLHRFCSDCIVTALRSGNKECPTCRKKLVSRRSLRRDSNFDALISKIYPSRDEYEAH
QLRVLERLNRLHNKDALSSSIEEGLRQQARYRSERNHRVKKPTQESDNTTFSGAEDNGDS
RSHLSHDSAPSHAPHSRGQTTSEAGPSRKRPRASDDGSGPEADSCSPNPPVRRLKEGPAS
EIELVFRPHPQLVHAQDYNQTRFVKTTANATVDHLSKYLALRIALEDGQSNKEREDRGRE
EAAAEETKGAAGSGEGSTLNHVSEKQYTIYIMTRGGQFSTLNGSLTLELVNEKYWKVRKP
LELYYAPTKDQQQPQQQPQQTPQHKSPPPPPPPPQREG
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggcagctccagtgaacatccaggctcccagtaagacctgggagctgagtctgtacgag
cttcacaggagccctcaggaggccattgtggacgggacagaggtggccgtgtctcctcgt
gctctgcacagtgagctcatgtgtcccatctgtctggacatgctgaagaacaccatgacg
accaaagagtgtctgcaccgcttctgctccgactgcatcgtgaccgcgctgcgatcaggg
aacaaagagtgtcccacctgcaggaagaagctggtctccaggcgttcgctgcgcagggac
tcaaacttcgacgccctgatctcaaagatttatccgagccgggacgagtatgaggcccac
cagctccgggtcctggagcgactcaacagactccacaacaaggatgcgctgagctccagc
atcgaggaggggctccgacagcaggcccgctacaggtctgagaggaaccaccgggtcaag
aagccgacccaggagagcgacaacaccaccttcagcggggcggaagacaatggcgactcc
cgctctcacctgtctcacgactccgccccctcacacgcccctcactcccgtggtcagacc
acctcagaggccggaccgagcagaaaacgcccccgagcgtcagacgacggctccgggcca
gaggcagacagctgcagccccaaccctccggtgagacgcctcaaagaggggccggcctcg
gagatcgagctggtgttcaggccacacccacaactggtccacgcccaggactacaaccag
accaggtttgtgaagacgacagccaacgccaccgtggaccatctgtctaaatacctcgct
ctgcgtatcgctctggaggacgggcagagcaacaaagagagggaggacagagggagagaa
gaggcagcagcagaagagactaaaggagcagcagggagcggagagggctcgactctgaac
cacgtcagtgagaaacagtacaccatctacatcatgacgagaggaggacagttctctacg
ctgaacggctctctgactctggagctggtcaacgagaaatactggaaggtgaggaaaccg
ctggagctttattacgctcccacaaaggaccaacaacaaccacaacaacaaccacaacaa
accccacagcataagtccccccctcctcctccccctcctcctcagagggaggggtga
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