Labrus mixtus (cuckoo wrasse): 132991059
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Entry
132991059 CDS
T10666
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132991059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmix03019
]
132991059
Messenger RNA biogenesis [BR:
lmix03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132991059
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
132991059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
132991059
NCBI-ProteinID:
XP_060915622
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Position
16:725803..750206
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AA seq
950 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGTWLTNTIDTLNMQVDQYESEVESLSVVTRKKKGDKEKQDRIEELKKFIEKHRHHI
RMLETILRMLDNDSVQVDSVRKIKDDVEYYLDSSQDPDFEENEFLYDDLDLEDIPQALLA
TSPPGNSILEDEIFQHSSSTPTSTTSSSPIPPSPATCTTENSEDDKKRGRSTDSEVSQSP
VKNGNPSSSLSSSSSSSSSSSSSSSCSSSSVSGLASSSLVSMATIAVGGSGGASGGSSHQ
VNSFGLLSNAAASSYSNATQQPPHPLVQQQQVKNSVISSSISTPLTNSASSAISYPASSA
ASPPNASTQGLLSSSSQPLALSASPQNSNSLGLGLGLSLGKGGMSGSLTSSPMSGGLGLS
GMPASLSTMASLLSSSTAPYSQAASTGAFSSGLPGSLGGVSTTSTTNSALGSIGSGNMTV
GGPTSTSGGLLGAAPGLNSIGSGILGLGSSQSGMQGSSLMSLSPVGGLAPGSGVGVIGSN
GGSSGSAGSSMLGGNSSLSIRPPSQQKQNGSSTNASCLSFSLTGYSAVVADSTTDSALNS
ASQSQISQPSCLTSTANQPKDTGPSLLGSLSLSSSSPSPAYYSEAKTVMGGSLLNGPLSY
SQPTDGIKPQEPLSSLKSMAERAALSSGMEGDVPSLHLTSDIFPSSTTAPSGPPSAPQPS
LSEVSIPPSLGVCPLGPVPLSKDQLYQQAMEEAAWTHMPHPSDSERIRCSEMQYLMRNPC
PTLPFHHQVPPPHSDTVEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYM
MWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaaggaaactacaaggtgaaatagatcgatgtctgaaaaaagtagcggag
ggtgtggaacagtttgaagacatttggcaaaagcttcacaacgcagccaacgcaaaccag
aaggagaaatatgaagcagacctcaagaaagagatcaaaaagttacagcgtcttcgagac
cagatcaagacgtgggtggcttccaacgagatcaaagacaaacggcagctagtagagaac
cgcaaactcatagaaacgcaaatggagcgattcaaagtggtggagagggagacgaagacg
aaggcgtattctaaagagggcctcggtctggcccagaaggtcgacccggctcagaaggag
aaggaggaggtcggcacgtggctaacgaatacgatagacacgttgaacatgcaggtggat
cagtatgagagcgaggtggagtctctctcggtcgttacgaggaaaaagaaaggagacaag
gagaaacaggaccggattgaagagctcaagaaatttatcgaaaagcatcgacaccacatc
cggatgctggagacgatcctgaggatgctcgacaacgactctgtgcaggtcgactccgtc
aggaagatcaaggacgacgtggagtattacctcgactcgtcgcaggatccagacttcgag
gagaacgagtttctttacgacgacctcgacctggaagacatccctcaggcgctgctcgcc
acctccccgccgggaaactcgatcttggaggacgagatcttccagcactccagcagcacg
ccgacctccaccacctcgtcctcgcccatccccccttcacctgctacttgcactacggag
aactcagaagacgacaagaagaggggccgatcgacggacagcgaagtgagtcagtcacct
gtgaagaacggaaacccctcgtcctcgttatcctcgtcctcctcctcctcttcctcctcc
tcctcatcgtcctcctgctcttcctcctccgtctccggactggcctcgtcctcactggtc
tctatggcaaccatcgccgtgggaggaagcggcggcgcctcagggggcagcagccatcag
gtgaactctttcggtctgctctccaacgccgccgccagcagctacagcaacgccacccag
cagcccccccacccgttggtccagcagcagcaggtcaagaactccgtcatctcgtcctcc
atctcgactcctctgacaaactccgcctcctccgccatcagttatcccgcctcctccgcc
gcctctccccccaacgccagcacgcagggtctcctgtcctctagctcgcagcccctcgct
ctgtcggcgtccccgcagaactccaacagtctgggcctgggtctgggtctctctctgggg
aaaggcggcatgtcgggctccctcaccagcagccccatgtctggaggtctcggcctgtcg
gggatgccggcgtccctgagcaccatggcgagcctcctgtccagctccaccgcgccctac
tctcaggcagcctccaccggcgccttcagctcgggcctgcccggctccttaggcggcgtc
agcaccaccagcaccaccaacagcgctctgggctccatcggcagcggcaacatgacagtc
ggcgggccgacatccacatcaggaggtctgctgggagcggcgcccggcctcaacagcatc
ggctctgggattctgggtctgggctcgagtcagtcggggatgcaggggtcttctctgatg
tcgctgagccccgtcggaggtttggcgcccggcagtggagtaggagtcatcgggagtaac
ggaggcagctcagggtcggcggggagcagcatgctgggaggaaactcctcgctctcgatc
aggccgccgagccaacagaagcagaacggcagcagcaccaacgcttcgtgtttgtccttt
tctcttacaggttacagtgccgtggtagcagacagcacaacagactccgccctcaacagt
gccagccaatcacaaatcagccaaccctcgtgtttgacctccacagccaatcagcctaag
gacactggtccgagtttactcggctctctaagtctgtcatccagctccccgtcgccggct
tactacagcgaggccaaaacagtgatgggaggcagcctgctgaacggcccgctgtcgtac
tcacagcccacagacggcatcaagccacaggagcctctgagcagcctgaagtccatggcc
gagcgagcagcactcagctcagggatggagggagacgtgccctccctgcacctcacctca
gacatcttccccagcagcactacggcgccctcgggccccccgtcagcacctcagccctca
ctgtcagaggtcagcatccccccctcgttgggggtctgcccgctgggcccagtccccctg
tccaaggaccagctgtaccaacaggccatggaggaggcggcgtggacccacatgccccac
ccgtccgactcggagaggatcaggtgcagtgaaatgcagtacctgatgaggaacccgtgc
cccaccctgcctttccaccaccaggtgccaccgccacactcggacacggtggagttttac
cagaggctttccacggagacgctcttcttcatcttttactacctggagggtactaaggcc
cagtatctggcagccaaggccctgaagaagcagtcgtggcgtttccacacgaagtacatg
atgtggtttcagagacacgaagaacctaaaaccatcaccgatgagtttgagcagggaaca
tatatttactttgattatgagaagtggggccagcggaagaaggaaggcttcacgtttgag
taccggtacctggaggaccgcgacctccagtga
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