Labrus mixtus (cuckoo wrasse): 132991077
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Entry
132991077 CDS
T10666
Symbol
rxrba
Name
(RefSeq) retinoic acid receptor RXR-beta-A isoform X1
KO
K08525
retinoid X receptor beta
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03320
PPAR signaling pathway
lmix04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
132991077 (rxrba)
03320 PPAR signaling pathway
132991077 (rxrba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmix03000
]
132991077 (rxrba)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lmix03310
]
132991077 (rxrba)
Transcription factors [BR:
lmix03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
132991077 (rxrba)
Nuclear receptors [BR:
lmix03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
132991077 (rxrba)
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
132991077
NCBI-ProteinID:
XP_060915658
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Position
16:complement(1918655..1937685)
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AA seq
471 aa
AA seq
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MEDSRDSRSPDSSSVSSPPSGQRSPPLASSAAASMTSLPPISTSGVNSPISSIGSPFSVI
SSSLGSPCLPGTPSVGYGPISSPQINSTVSMSGLHAVSSSDDVKPPLGLKQLSAHSPGPM
LSQKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCMVDKRQRNRCQ
YCRYQKCLAMGMKREVAEMNVRSVQEERQRNRERDGEVESTSSVVNEEMPVDKILEAEVA
VEQKTELHADGSSGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRA
GWNELLIASFSHRSISVKDGILLATGLHVHRNSAHSAGVGAIFDRAHNAEVGAIFDRVLT
ELVSKMRDMQMDKTELGCLRAIILFNPDAKGLSNSSEVELLRERVYASLESYCKQKYPDQ
QGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagcagagattcccgcagccccgacagctcctctgtgtcgtccccgccgtcg
ggccaacgctcgccccccctggcgtcctcagccgcagcttccatgacctccctgcctccc
atcagcacctcaggagtcaacagtcccatcagcagcatcggctcccccttctctgtcatc
agctcctcgctgggctcgccatgcctacctggcacgccatcggtgggatacggcccgatc
agcagcccgcagatcaactccacagtgtccatgtcggggctccacgctgtgagcagctct
gacgatgtgaaacctccgctgggcctgaagcagctgtcggcccacagtccagggccgatg
ctctctcagaaacgcctttgtgccatctgtggagaccgatcctctggtaagcactacggc
gtctacagctgcgagggctgcaaaggcttcttcaagcggacagtacgcaaagacctgacc
tacacgtgtcgggacaataaagactgcatggtggataagaggcagaggaaccgctgtcag
tactgccgctaccagaagtgcctggccatgggcatgaagagagaagtggccgagatgaac
gtcagatccgttcaagaagagcgacagaggaacagggagcgggacggcgaggtggagtcg
actagcagtgtggtgaacgaggagatgccggtggataagattttagaggcggaggtggct
gtggagcagaagacggagcttcatgctgacggcagttcaggcggcagctctcccaacgac
ccggttaccaacatctgtcaggcagcagacaagcagctcttcaccctggtggagtgggca
aagaggattcctcacttctcagagctgcctctggatgaccaggtcatcctgctacgtgca
ggctggaatgaactcctgattgcatcgttctctcatcgctccatctcggtgaaggacggg
attttactggccaccggcctgcacgtccacaggaacagcgctcacagtgcaggtgttgga
gccatctttgacagggcgcacaatgccgaggttggggccatatttgacagggttttgaca
gagctcgtaagcaagatgagagacatgcaaatggataagacggagctgggctgccttcga
gcgatcatcctctttaacccagatgccaagggtttgtctaactccagtgaggtggagctc
ctgagagagagggtgtacgcgtctctcgagtcttactgcaaacagaaatatccagatcaa
cagggcaggtttgcaaagctcctcctccggctgccggcgctgcgctccataggtctgaag
tgcctggagcacctgttcttctttaaactaatcggtgacacacccattgacaccttcctg
atggagatgcttgaggcccctcaccagctcacctag
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