Labrus mixtus (cuckoo wrasse): 132991362
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Entry
132991362 CDS
T10666
Symbol
col9a2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04510
Focal adhesion
lmix04512
ECM-receptor interaction
lmix04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132991362 (col9a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132991362 (col9a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
132991362 (col9a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lmix00535
]
132991362 (col9a2)
Proteoglycans [BR:
lmix00535
]
Extracellular matrix (ECM) proteoglycans
Others
132991362 (col9a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
132991362
NCBI-ProteinID:
XP_060916108
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Position
16:16208198..16229404
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AA seq
691 aa
AA seq
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MAALSALLKTWVILQTLCLALAQVRGPPGPQGQPGPAGPSGTPGSDGIDGDKGPPGPPGS
PGQKGEPGEAGPDGAPGENGIDGLIGAKGDRGPVGSPGPKGQPGPGGEPGPPGSGLPGLA
GAPGPIGLPGEIGPNGPKGVLGASGPPGLPGPPGKPGPPGKFIGGEEGSAEFQCPLNCPA
GPKGPQGLQGVKGHKGRSGVLGEPGTIGKTGLKGEVGISGEQGIPGPPGPMGLRGYPGMM
GPKAEAGPRGYKGITGPVGIPGPPGEEGPQGPPGEAGDKGDKGSRGIQGPQGAVGKKGEN
GLPGIDGKDGTPGIPGIKGGPGQAGMPGPPGPQGTAGLPGSPGSKGGPGSKGEPGPRGHV
GMQGASGPLGEPGLPGEAGMEGVPGPKGDRGQRGEVGPQGVVGKPGSKGERGPIGVPGAQ
GLSGTKADKGFQGKVGSKGDIGDPGVEGLAGEKGEKGLSGEPGPKGQQGIRGDSGHNGPT
GDPGKPGDQGPPGLPGPRGLNGERGVPGMPGIQGVTGRDASDQHIIEVVLKMLQERLAAV
AVSAKRAVLGGAGVMGPPGPPGPPGATGPQGPHGLPGARGIPGMFGGPGQIGNTGLKGKR
GARGDRGDPGKPHPGLPGPPGIQGPPGVDGVARDGRHGERGPQGAAGEAGYPGKAGSPGL
PGYCEAAMCLAASAYTSPRLQEAGTIKGPNV
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctctctgccttgctgaagacctgggtgatactgcagaccctgtgcctggct
ctggcccaagtgaggggtccacctggaccccagggccagcccggcccagcaggcccttct
ggcacccctggatcagacggcattgatggagataaaggacctcctggccccccgggttca
ccaggacaaaagggagagccaggagaggcaggtcctgatggagcaccaggagagaatggc
attgatggtttgatcggagcaaagggggatcgaggtcccgttggaagccctggccccaag
ggccaacctggaccaggtggggaaccaggacctcctggatccggacttccaggactggct
ggcgctccagggccaattggtcttccaggcgaaattggaccaaatgggcccaagggtgtg
ttgggagcatctggacctccaggacttcctggacctcctggcaagcctggtcctccaggg
aagttcattggtggagaagaaggcagcgctgaatttcagtgtcctcttaattgtccagca
ggacctaaaggcccacagggactgcagggagtcaagggacacaaaggacgttctggtgtt
cttggagagcctggcaccataggaaaaacgggtctcaagggagaagtgggcatctctggg
gaacagggtatcccaggacccccgggtccaatgggtctgaggggttatccagggatgatg
ggtcctaaagcagaagcaggccctcgtggctacaagggcatcacgggacctgtaggaatt
cctgggccccctggtgaggaagggcctcagggaccacctggagaggcaggagacaaggga
gacaaaggcagtcgaggcatccagggcccacagggtgcggttggcaaaaagggagaaaat
ggtctgccgggcattgatggaaaggatggcacacctggtattcctggaatcaagggcggc
cctggccaagctgggatgcctggtcctcctggtcctcagggaacagctggattgcctggc
agcccagggtcaaaaggtggacctggatctaaaggcgagcctggaccgaggggtcatgtt
ggcatgcagggtgcatctggacctttgggtgagcctggtcttcctggtgaggctggtatg
gaaggagttcctggaccaaagggtgaccgaggccagcggggagaagtcggaccacaggga
gtagttggcaaacctggaagcaaaggagagagaggaccaattggagtcccaggagcccag
ggtcttagtggaacaaaagcagacaagggtttccaaggaaaagttgggtcaaagggagac
attggtgaccccggcgttgagggattggctggagagaaaggtgaaaagggtttgtctggc
gagcctgggcccaaaggacagcaaggaatcaggggtgacagcggtcacaatggacccact
ggagacccaggtaaacctggagaccagggaccaccaggacttcctggtcctaggggactc
aatggagagcgaggagtacccggcatgccaggcattcagggagtaactggacgtgatgca
tcagaccagcatatcattgaagtggtgttgaagatgttgcaggagaggctggcagcagta
gcagtgagcgccaagcgggctgtgctcggtggagcgggtgtgatgggacctcccgggcct
cctggacctccaggggcaactggaccacaggggccacatggtttacctggtgcacgtggt
attcctggcatgtttggagggccagggcagattggaaacacaggactgaaaggaaagaga
ggagcaaggggagacagaggagatcccggtaaaccacatcctggactacccggaccccca
ggaatacaaggtcctcctggtgttgatggtgtagctcgggatggtcgccatggcgagaga
ggacctcagggagcagctggagaggccggttacccaggtaaggcgggttcaccaggtctc
ccaggctactgtgaggcggcgatgtgtctggccgcatcagcgtacacctccccgagacta
caggaggcaggcacaatcaaaggacccaatgtttag
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