Labrus mixtus (cuckoo wrasse): 132991589
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Entry
132991589 CDS
T10666
Name
(RefSeq) probable ATP-dependent RNA helicase ddx6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03018
RNA degradation
Brite
Enzymes [BR:
lmix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132991589
Messenger RNA biogenesis [BR:
lmix03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
132991589
mRNA degradation factors
5'-3' decay
Decapping complex
132991589
Chromosome and associated proteins [BR:
lmix03036
]
Eukaryotic type
Gene silencing
piRNA pathway
132991589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132991589
NCBI-ProteinID:
XP_060916369
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Position
16:complement(5041540..5053780)
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AA seq
494 aa
AA seq
DB search
MATARTENVGPVVMGLNKQNGQLRGQTKPAPVQPASTTQGKALGSAQIAGAALQDGGGGG
GGGIKFGDDWKKSLKLPPKDCRVKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPI
QEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDHIQALVMVPTRELALQVSQ
ISIQISKHLGGVKVMATTGGTNLRDDIMRLDEIVHVVIATPGRILDLIKKGVAKVDRVQM
MVMDEADKLLSQDFVVLIEDIISFLAKNRQILLYSATFPISVQKFMAKHLQKPYEINLME
ELTLKGITQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCF
YIHAKMMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRI
GRSGRFGHLGLAINLITSEDRFNLKSIEDQLVTDIKPIPSSIDKSLYVAEFHSSGADCDV
EEVEEKPGRQQDST
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgccagaacagaaaacgttggcccggtcgtcatgggactgaacaagcagaac
ggacagctcagaggacagaccaaaccagctccagtccagccagcatccacaactcaagga
aaggctttgggatcagcccagatagcaggtgctgcccttcaggacggaggaggaggagga
ggaggcggcatcaagtttggagacgactggaaaaagagcctaaagctcccacccaaagac
tgcagggtcaaaacctcagatgtgacgtccaccaagggaaatgaatttgaagattactgt
ctcaaaagagaactcctgatgggcatctttgagatgggttgggagaaaccttcccctatc
caggaggagagtattcccatcgccctgtctggacgggacattctggctcgggctaagaac
ggaacggggaaaagtggagcctatctcatcccactgctggagagaatagacctgaaaaag
gaccacatacaggcgctcgtcatggttcccacccgtgagctggcactgcaggtgagccag
atctccatccagatcagcaaacacctgggaggagtcaaagtcatggcaaccacagggggt
accaacctgcgagatgacatcatgcgtctggatgaaatcgtgcatgtggtcatcgccacg
cctggtaggatcctggacttgataaaaaaaggagtggcaaaagtggacagggtccagatg
atggtgatggatgaggcggacaagctgctgtctcaggactttgtggtgctcatcgaggat
atcatcagcttcctggccaaaaacaggcagatccttctctactctgcaaccttccccatc
agcgtgcagaagttcatggccaagcaccttcagaaaccctatgagataaacctgatggag
gagctgactctgaagggcattactcagtactacgcctacgtcacagagaggcagaaagtc
cactgcctcaacacgctgttctccaggcttcagatcaaccagtctatcatcttctgtaac
tccactcagagggtggagctcttagccaagaagatcactcagctgggctactcctgcttc
tacatccacgccaagatgatgcaggagtacagaaaccgcgtgtttcatgacttcagaaat
gggctgtgcagaaatctggtctgcactgatctcttcaccagaggtatcgacatccaggct
gtcaatgtagtcatcaacttcgacttccctaagaatgctgagacttacctccatcgtatc
ggaagatcagggaggtttggtcacctgggcttggccatcaacctgatcacatcagaggac
cgcttcaacctgaagtccatcgaggaccagctggtgaccgacatcaagcccattcccagc
agcatcgacaagagcctctacgtggccgagttccactcgtccggagcggactgcgacgtg
gaggaggtggaggagaaaccaggacgccaacaggacagcacctaa
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