Labrus mixtus (cuckoo wrasse): 132991656
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Entry
132991656 CDS
T10666
Symbol
exosc7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132991656 (exosc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmix03019
]
132991656 (exosc7)
Messenger RNA biogenesis [BR:
lmix03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
132991656 (exosc7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
132991656 (exosc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
132991656
NCBI-ProteinID:
XP_060916459
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Position
16:complement(20188012..20193612)
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AA seq
291 aa
AA seq
DB search
MATVQVSEAEKVYILHGIRDDLRVDGRGCEDYRHMEIETDVVSNTDGSAKITLGHTAVLV
GVKAEIGKPKPLVPNEGYLEFFVDCSANATPEFEGRGGEELGTELSNTLYKVFNNKHSVD
LKSLCISAGEHCWVLYVDVLLLQCDGNLYDAISIAIKAALFNTKIPRVHISSDDEGGKEI
ELSDDPYDCMRLDVENVPCIVTLCKVGHRHVVDATLQEKACSVASLIISVTHKGTVTCTR
KVGGGSLDPESIYEMTEAGKRVGKALHAPLMKLLQQEESLGTKRQKVGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagtacaagttagcgaggcggaaaaggtgtatattttacacggtattcgggat
gacttacgggtggatggaagaggctgtgaggactatagacacatggaaatagagactgat
gtggtgtcaaacacggacggctcggctaaaatcacactggggcacacagcagttctagtt
ggggttaaagctgaaatcggaaaaccaaaacctctggtcccaaacgaaggctatttggag
ttctttgtggattgttcagccaacgccacccctgagtttgagggcagaggaggtgaggag
cttggcacagagctgagtaatactctctacaaagtattcaacaacaaacacagtgtggac
ctgaagagcctctgcatcagtgcaggagagcactgctgggtcctctatgtggatgtgctg
ctcctgcagtgtgatggaaacctgtatgatgccatttcaatagctatcaaggcagctctc
ttcaacacaaaaattcccagagtgcacatatcatctgacgacgaaggaggaaaggaaatt
gagctttcggatgatccgtatgattgcatgaggctcgatgtagaaaacgttccttgcata
gtgacgttgtgtaaggtgggtcacaggcacgtagtggacgccaccctgcaggagaaggcc
tgctctgttgccagccttatcatctctgtcacacacaagggcaccgtcacctgcaccagg
aaggtgggtggaggcagcctggacccagagagcatctatgaaatgacagaggcaggtaaa
cgggtggggaaagctcttcatgctcctcttatgaagcttctgcagcaggaggagagtttg
ggaaccaagcgacagaaagttggcttccttggttaa
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