Labrus mixtus (cuckoo wrasse): 132991795
Help
Entry
132991795 CDS
T10666
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132991795 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmix03019
]
132991795 (nup54)
Messenger RNA biogenesis [BR:
lmix03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132991795 (nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
132991795
NCBI-ProteinID:
XP_060916663
LinkDB
All DBs
Position
17:6391112..6400032
Genome browser
AA seq
587 aa
AA seq
DB search
MAFSFGGAASNPAAALTAPGFGVTTTTAAAPATGFSFGSTNSGFGGLGAGNITAGGFSFG
GFGLNANPAAVSFNVGCFGTATTSGTVFNFGNSLASTGAFGGFGTTATTANATGSTFSFA
APSSTTGGLFGTTQNKGFGFSSGLGAGTTAGATGFGAGLGTTGLGGFGCFNIQPTQQQGG
LFGQPAQQPGQPQPTQLYQQVTALSAPTLLGDERDSILAKWNQLQAYWGTGKGYYSNNNP
AVDFTQENPFCRFKAVGYSCSPVSKDEDGFVVLVLNKKEADVRALQQQLVESLHKILGSN
QSLTVNVDGVKALSSDQTEVIIYLVERSPNGTSKRIPATTLYSYVEQANIKVQLTQIGVA
MSMTRTELSPAQLKQLLQNAPAGVDPIIWEQAKVDNPDPEKLIPVPMVGFKELLRRLQIQ
EQMTKQHQTRVDIISSDISDLQKNQATTVAKIAQYKRKLMDLSHRVLQVLIKQEIQRKSG
YAIQVDEEHLRVQLDTIQSELNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYNVDADLL
REIKQHLKQQQDGLSHLISVIKDDLEDIKLIEHGLSDSGHMRGGMLS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcagttttggcggcgctgcgagcaacccagcggcagctctcacagcccctggt
tttggggtaaccaccactactgcggctgcaccggccacaggatttagttttggctccacc
aactctggatttggggggctgggagctggaaacatcacggctggtgggtttagttttggg
gggtttggtttaaatgccaacccagcagcagtcagctttaatgtgggatgctttggtaca
gcaaccacttctggcactgttttcaattttggtaatagcctggctagcacaggtgcgttt
ggtggctttgggacgacagcaacaactgccaacgctactgggtcgacctttagctttgca
gctccttccagtacgacaggaggcctgtttggtaccactcagaacaaaggctttgggttc
tcgtctggcctcggcgctgggactactgctggggcaacaggatttggagctggattagga
acaactggcctgggtgggtttggatgctttaatatccagccaactcagcagcaaggaggc
ttgtttggtcagccggcccagcagccgggtcagcctcagcccacccagctttaccagcag
gtcactgccctgtcagctcccaccttgttgggcgatgagcgtgattccatcctagcaaaa
tggaaccaactacaggcttactggggcactgggaagggctactatagcaacaacaaccca
gctgttgactttacgcaggagaatccattctgcaggttcaaggcggtgggctatagctgc
agtccagtaagtaaggacgaggatggttttgtggttctggttctcaataaaaaggaagca
gatgtgcgagctctgcagcagcagctcgtcgagtcccttcacaagatcctgggaagcaac
cagtcactcactgtcaatgtagatggggtcaaagctctttccagtgatcagacggaggtg
atcatttatctggtggagcgttcacctaatggcacctccaagcggataccagccaccacc
ctctacagttacgtggagcaggcaaacattaaggtccagctcacgcagatcggagtggcc
atgtctatgacgcgcacagagctgtctccggcacagctcaaacagctgctgcaaaatgct
cccgcaggagtggaccctataatctgggagcaggccaaagtggacaacccagaccctgag
aaattgatcccagtgcccatggtgggattcaaagagctgcttcgtaggctgcagatccag
gagcagatgaccaaacagcaccagaccagagtggatatcatctcaagtgacatcagcgat
ctgcagaagaaccaggcgaccacagtggccaagatcgcccagtacaagaggaagctgatg
gatctctcccacagggtgctgcaggtgctgatcaaacaggagattcagaggaagagtggt
tacgctatccaagtggatgaggagcacctcagggtgcagctggacaccattcagtcagag
ctcaatgctcccacacagttcaagggtcggttgaatgagctgatgtcccaaatccgcatg
cagaatcattttggagctgtgagatcagaagagcgctacaacgtcgatgccgaccttctc
agagaaattaaacaacatctgaaacagcagcaggatggtttaagtcatctgatcagcgtc
atcaaagacgacttggaagacatcaaactcatagagcacgggctgagcgacagtggacac
atgagaggaggcatgctgagctga
DBGET
integrated database retrieval system
