Labrus mixtus (cuckoo wrasse): 132991822
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Entry
132991822 CDS
T10666
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132991822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmix03021
]
132991822
03036 Chromosome and associated proteins [BR:
lmix03036
]
132991822
Transcription machinery [BR:
lmix03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132991822
Chromosome and associated proteins [BR:
lmix03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
132991822
Chromatin remodeling factors
BAF complex
132991822
PBAF complex
132991822
GBAF(ncBAF) complex
132991822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Arc1p_N_like
Motif
Other DBs
NCBI-GeneID:
132991822
NCBI-ProteinID:
XP_060916715
LinkDB
All DBs
Position
2:complement(29049161..29069330)
Genome browser
AA seq
1703 aa
AA seq
DB search
MSTPDPPMGGTPRPGTSPGPGPSPGAMIGPSPGPSPGSSHSMMGPSPGPPSSGHSQPGPS
GYGQESMHPLHKPMESMHEKSLSEESRFSQMKGLSMRQGGHSGMGPPPSPLDQHSQGYHS
PLGGSDHSSPVPSNGPPSGPLMPSSSSSSSSGGPGSTSAPLDGPSGDQHTLGPNNRPGPP
GGSGPGPSPGPSLGSSVPSLGSGLEPVGPAGPGGPGGPTPFNQNQLHQLRAQIMAYKMLA
RGQPLPDHLQMAVQGKRPMPGMQQQPMPSLGPGAGGGPGVGPAGPGPGPMVSGYGRAHGM
MGPNMPPPGPSGTPVGMQGPNPNGPPKSWPEGPMVNAAAPSNAPQKLIPPQPTGRPSPAP
PSVPPAASPVMPPQTQSPGQPAQPTPMMPYHAKQNRITPIQKPCGLDPVEILQEREYRLQ
ARITHRIAELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALD
AKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSITG
KMQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQ
QTDEYVANLTELVRAHKAAQALKEKKKKKKRKKKLENAESQTPALGPDGEPLDETSQMSD
LPVKVIHVDSGNILTGVDAPRAGQLDTWLEMNPGYEVAPRSDSEDSEEEEEEEEEEEEPQ
PSTALVDDKKKITDPDCEDVSEVDVRHIIENAKQDVDDEYMGAAFARGLQSYYAVAHAVT
ERVDKQSSLLINGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEL
KRLNGPYLIIVPLSTLSNWVYEFDKWAPTVVKVSYKGSPAARRAFVPQLRSGKFNVLLTT
YEYIIKDKQVLAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNKLP
ELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRR
LKKEVEAQLPEKVEYVIKCDMSSLQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTI
MQLRKICNHPYMFQQIEESFSEHLGFSGGIVTGPDLYRASGKFEVLDRILPKLRVTNHKV
LLFCQMTSLMTIMEDYFAYRSFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAG
GLGLNLQSADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTINSVEEKILAAAK
YKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEVWGQEVCLRINEEDEVPDDET
VNQMIARSEEEFDQFMRMDLDRRREDARNPRRKPRLMEEDELPTWIMKDDAEVERLTCEE
EEEKMFGRGSRQRKEVDYSDSLTEKQWLKVSSYLQIDIKIKTLNTSLGIKGFLVSHVSMS
LQAIEEGTLEEVEEEVRHKKTTRKRKRDRDLDLPGPSSSSLGGRGRGDKDEDGKRQRKRG
RPPAEKLSPNPPALTKKMRKIVDAVIKYKDSTSGRQLSEVFIQLPSRKELPEYYELIRKP
VDFRKIKERIRGHRYRSLGDLERDVMLLFQNAQTFNLEGSLIYEDSIVLQSVFTSLRQKI
EKEEESEGEDSEEEEEELDEGSESETRSVKVKIRLGRKDKGGDRGKGRSRRMGRTRAKPV
VSDDDSEDEQEEERSPSATDDES
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccagatccccccatgggaggcacccctcgcccaggtacttcccctggtcct
ggtccctcccctggggcaatgattggcccgagccctgggccctccccgggctcctctcac
agtatgatgggccctagccctggccctccctcctctggacactctcagcctggaccctct
ggttatggccaggagagcatgcacccactgcacaaacccatggagagcatgcatgagaag
agcctgagtgaggagagccgcttcagtcagatgaagggactgtccatgagacagggcggg
cacagcggcatgggccccccgccaagtcctctagaccaacactcgcaaggttaccactct
cctcttggtggctccgaccactccagccctgtcccttcaaatggtcctccctctggacct
ctcatgccttcctcctcctcttcctcctcctctggtggtcctggctctacctcagcacca
ttagacggccccagtggagatcaacacactctgggtcccaataaccgccctggccccccg
ggaggctcaggcccaggccccagtcctggacccagtcttggctcaagcgtccccagcctt
ggatctgggcttgaacctgtgggacctgcaggccctggaggtcctggtggccccactccc
tttaaccagaaccagcttcaccaactcagagcccagatcatggcttataagatgctggcc
cggggtcagcccctgccggaccacctccagatggctgtccaggggaaaaggccgatgcct
gggatgcagcagcagccgatgcccagcctgggcccaggagctggaggcgggccgggtgtt
ggaccagcaggacccggacctggtccaatggtctcaggctacggtcgagctcatggaatg
atgggtcccaacatgcctcctcctggcccatccggtactccagttgggatgcagggacca
aacccaaatggacctcccaagtcctggcctgaaggtcctatggtgaatgcagcagccccc
tccaacgcaccccaaaagctgattccccctcagcccaccggccggccctctcccgcccct
ccatcagttccccctgctgcctccccagtgatgcctcctcagacccagtcccccggacag
ccggcacagcctactcccatgatgccttaccacgccaagcagaaccgcattacccccatc
cagaagccctgcggcctcgacccagtggagatcctgcaggagagggagtacaggttacag
gctcgtatcactcatcgcatcgcagaactggagaacctgccgggctccctggcgggtgat
ttacgtaccaaagctaccatagagctcaaagccctgcgactgcttaacttccagagacag
ctgcgtcaagaagtggtggtgtgtatgcgtcgtgacacagctctagagacggcgcttgat
gccaaggcctacaagcggagcaagcgtcagtctctgcgggaggcccgcatcacagagaag
ctggagaaacagcagaagattgagcaggagcgcaaacgcaggcagaaacatcaggagtac
ctcaacagcatccttcaacacgccaaagacttcaaagagtaccaccgctccatcacgggc
aaaatgcagaaactgaccaaagctgtggccacttaccacgccaacaccgagcgcgagcag
aagaaagagaacgagcggattgagaaagagaggatgaggaggctcatggctgaggatgag
gagggctatcgtaaactgatcgaccagaagaaggataagcgtctggcctacctgctgcag
caaactgacgagtacgtcgccaacctcaccgagctggtcagagctcacaaagctgcacag
gcgctcaaggagaagaagaagaagaagaagagaaagaagaagttggagaatgctgaaagt
cagactcctgcgttgggtccagatggagagcctctggatgagacgagtcagatgagcgac
ctgcctgtgaaggtcatccatgtggacagtgggaacatcctgacaggagttgatgctcct
agagctggacagctggacacatggctggagatgaacccaggttacgaggtggcgccccgc
tcagacagtgaagacagtgaggaggaggaagaggaggaggaggaagaggaggagcctcag
ccatccactgctctggtggatgacaagaagaagataacagaccctgactgtgaagacgtg
tcggaggtggatgtccgacatattattgaaaatgcgaaacaggatgtggatgatgagtac
atgggtgcagcgtttgctcggggcctgcagtcttactatgcggtggctcacgctgtcaca
gagagggtggacaaacagtccagtttgttaataaatggacaactcaagcagtatcagatt
aaaggtctggagtggctggtttccctctacaacaataatctgaacgggatccttgctgac
gagatgggtttgggaaaaaccatccagacgatcgccctcatcacgtacctcatggagctc
aaacgtcttaatggaccctacctcatcatcgtaccgctctcaactctttctaactgggtg
tacgagttcgacaagtgggcacccacagttgtgaaagtgtcctacaagggttctcctgcc
gccagaagagctttcgtcccccagctgcgcagtggaaagtttaacgtccttctcaccact
tacgagtacatcatcaaggacaaacaagtgctggccaagatccgctggaagtacatgatc
gtggacgagggccaccgtatgaagaaccaccactgtaagctgacccaggtcctgaacacc
cactacctggccccgcggcgagtcctgctgacggggacgccgctgcagaacaaactgcct
gagctctgggcgctgctcaacttcctcctgcccaccatcttcaagagctgcagcaccttc
gagcagtggttcaacgctccgtttgccatgaccggagagaaggttgacctaaatgaagag
gagaccattttgattatccgtcgtctccataaagtgctacgtcccttcctgttgcgcagg
ctgaagaaggaagtggaggcacagcttccagagaaggtggaatatgtgatcaagtgtgac
atgtcgtctcttcagagggtgctgtacagacacatgcaggccaaaggagtcctgctcact
gatggatcagagaaggacaagaagggtaaaggaggcacaaagacgctgatgaacaccatc
atgcagctgaggaagatctgcaaccacccttacatgttccaacaaatagaggaatctttc
tctgaacatttaggattctctggtgggatagtaacgggtcccgacctgtatcgagcatcg
gggaagtttgaggtgttggatcgaatcctgccaaagctgagagtcacaaaccacaaagtg
ctgctgttctgtcagatgacatcactcatgaccattatggaggattactttgcctatcgc
agcttcaagtatctgcgtctggatggcactacgaaggccgaggacagagggatgttactg
aagacatttaatgagccggggtcggaatactttatcttcctcctgagcaccagagctggt
ggcctgggactcaacctgcagtctgcagacactgtggtcatctttgactctgactggaac
cctcatcaggaccttcaggctcaggatcgagcccaccgtatcggtcaacagaacgaggtg
cgcgtgctgcgtctgtgcaccatcaacagtgttgaggagaaaatcttggccgctgctaag
tacaaactaaatgtggaccagaaggtcatccaggccggcatgtttgaccaaaagtcctcc
agccacgagcgcagggccttcctgcaagccatcctggagcacgaggagcaagacgaggtc
tggggacaggaagtgtgtctgcggatcaacgaagaggacgaggtgcccgatgacgagacg
gtcaaccagatgattgcaaggagtgaggaggagtttgaccaattcatgcgaatggacctg
gaccggcgtcgtgaggacgcccgaaatccccggagaaagcctcgactgatggaggaggac
gagctgcccacctggatcatgaaggacgacgccgaggtggaacggttaacctgcgaggag
gaggaggagaaaatgtttggacgaggatccaggcagcggaaagaggtggactacagcgat
tctctgaccgagaagcagtggctcaaggtgagttcatatctacagattgacatcaaaatt
aaaactttaaatacaagtctaggcattaaagggttcttagtgtcacatgtatctatgtca
ttgcaggcgatagaggagggcacgctggaggaggtggaggaagaggtgcgtcacaaaaag
acgacccgtaagaggaagcgggaccgcgacctggacctccctggtccctcctcttcttcc
ctaggggggcgagggcggggggacaaagatgaagatggaaaaaggcagagaaagagagga
cgaccacccgctgagaaactttctcccaacccgcccgccctcacaaagaagatgaggaag
atcgtggacgccgtcatcaagtataaagacagcaccagcgggcgtcagctcagcgaggtg
ttcatccagctgccgtctcgaaaagagctgcctgagtactacgagctgatccgcaagccg
gtggacttcaggaagatcaaggagaggattcgtggtcatcgctaccgcagtctgggcgac
ctggagagagacgtcatgctgctcttccaaaacgctcagaccttcaacctggaggggtcg
ctgatatatgaagactccatcgtcctccagtcagtgttcaccagtttgaggcaaaagatc
gagaaggaggaggagagtgagggagaggacagtgaggaagaggaagaggaactggatgaa
ggatcagagtctgaaactcgctcagtgaaagtgaagatccgtctgggaaggaaggacaaa
ggtggagatcgtgggaagggtcgcagcagacgaatgggacgcaccagagccaagcctgta
gttagtgacgatgactcggaggacgagcaggaagaggagcgctcccccagtgccacagat
gacgagtcctga
DBGET
integrated database retrieval system
