Labrus mixtus (cuckoo wrasse): 132992068
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Entry
132992068 CDS
T10666
Name
(RefSeq) tenascin-like isoform X1
KO
K06252
tenascin
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04510
Focal adhesion
lmix04512
ECM-receptor interaction
lmix04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132992068
04518 Integrin signaling
132992068
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132992068
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lmix00536
]
132992068
Glycosaminoglycan binding proteins [BR:
lmix00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
132992068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
EGF_TEN
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
Fn3_Dep-1_3rd
Pur_ac_phosph_N
Fn3_Dep-1_2nd
Fn3_VIN3
DUF7949
EGF
NDNF_C
Motif
Other DBs
NCBI-GeneID:
132992068
NCBI-ProteinID:
XP_060917160
LinkDB
All DBs
Position
17:1243916..1278730
Genome browser
AA seq
2417 aa
AA seq
DB search
MGTRGLLGCLLITALLGSSHAGLVKKILRHRRQTLTPPDEHNVSLPSTDHPVVFNHVYNI
NVPASSLCSVNLDAPESTPLLPNDAPASPGRRVDEHTVDRDNQIVFTHRINIPRRACGCA
DDLPGLKDLMSRLEMLEGEVSALRDQCSVDGGCCGAQVTGDVGTKPYCNGHGNYSSESCG
CVCGPGWTGPNCTEPECPDNCQNRGRCSDGKCECFKGFGGDDCSLQVCTVDCGEHGQCAG
GVCVCSDGYLGDDCSQTECLNNCRGRGRCEDGECMCEEPWTGSDCAELICPKDCYDRGRC
ANGTCYCDDGFAGEDCGERTCPHDCNGNGFCVDGRCVCIAGFSGDDCAQLTCINDCNDRG
MCFNGVCICDAGYQGEDCSQLACLNNCNHRGQCINGQCACDVGFVGDDCSELSCPSNCLN
RGRCVNGQCVCEEGFAGEDCSIRTCPSNCYGRGECVDGRCECHTGFTGADCGELSCPNDC
QSRGRCVDGQCVCDEGFTGEDCGQKACPNDCLGRGHCADGKCVCREGYSGDDCSVLACPS
NCNSRGRCVDGKCACDSGYRGESCAELSCLNDCQDQGRCEDGRCVCDEGYIGDDCSEVSP
PKDLTVSEVTSDTVDLAWNNEMLVTEYLVTFVPTSPGGLLQEFTVSGDKTAATVKELEPG
LEYLISVYAVLSNKRSVPISARVATDLPQPEGLIFKSVRETTVEVVWDQLDFPFDGWEIY
FRNTKKENGKVLSTVSSSQNQFLQSGLGPGQEYEVSLNIVKNDTRGPPTSKRVTTRIDGP
RQVEVKDVTDSSALIGWSQPLAPVDRITLSYGPGSAPSDETSVEVPPPDKQYSIDGLQPD
TEYSVSLVSRSGDVSSDPVLTTFTTALDGPRNLQVVSQTEDSITLEWTNSRADVGSYRVK
FSPISGASHGEDLFPRGPGETTGATITGLKPGTEYGIGVTAVKNESESLPATTNAATDID
PPTDFEEVESTETSLTLRWRKPEAKVGAYRLVYATGDGLIEIEEIPAAATSHVLTNLTPG
MSYTLTLAAERGLKRSSPVTISASTASFTFYLADSDDRELTTPTGAEDNVISFSNLDPSE
PRFSGADPEDELGALTISGVTPEGFDLSWKLSARTVYDGFTVEYTDTQGLSDVRQIQLPG
DATASRIQGLEASTEYQIKLSGISGSQRSALLEAVAVTATKPTSPDVLTLRIKNVQTTPQ
TARDTQQTQTPEPLNTEAPPTTEAPPISTAPPTHVAPPISEAPPTNVAPPISEAPPTSDS
DVMSSGAEPESSILDVVRNLTVNVSSSSVSLTWSAPDDAFDSFSVEVSASSKTHLTSLPG
NIRKAEIEGLTPSTQYNITLHGLVEGKRSLPLRVFATTAELKPSVVNLTISDKTWDGFTA
SWRPVDGEFESFVIEVTNLENFAESQNLTVSGDALSLGISGLNPNTSYMVGLFGMHQGSF
LEPLYIEATTVILPTLGKLFISNLTSESFSIHWNGTDGTFDGFILEIIDSDWLTEPRECN
ISHVVKSYDVTGLRPSTDYVAYLYGTYKGSRTSAVSIVASTAEEPDLSRLVVSNITSDRF
SLSWRTGGKAFDNFIVEVRESALPSQAMGRALTGDVRSTVMAGLKASTRYNIKLYASDGG
QNTPPLFEVATTEDVPLLGPIAASSVSPHDLSVSWRTVSGHFDGFVIRVSDPEQHSDTLE
FRLPGEARNFTVSNLMDATGYDIELYGLSHGRQTPSVLAHAVTAPLPRVENLTISNITPY
GFRVSWEVKQQQQQQQQQHQEEDLAPSSGGFSRFHIVVTDSGWLLEPQEFTVPGNQSHLD
IWGLITGIGYEVRLTGVSESGLLSRPLNTVAVTEAEPEVDHLFLSDVTADGFRVSWAADD
DLFDRFVIKVRDGKRLAHPQEYSVRGDERTKVLTGLMGGTEYEIELYGVSLDQRSQPITG
VAQTGLSTPKGLHFSEVTDSSAVVHWSMPRSPVDNYRVTYIPFEGGSPMSLTVDGGVFET
LLPNMIPGKVYQVTVSAVKGLEESDPSTDTVTTGLDKPQGLIAVNVTDTSALLLWQPSVA
IVDGYVITYSVDSVSPMVEHVSGNIVEFEMDSLFPGTHYTVGVHAMREAQKSDSAVTDFT
TDVDPPRDLTAVNIQTDSATLTWRPPQAAVTGYTLTFTSADGTIREVVLSETASSYSMAQ
LTGSTEYNVRLQAIAGAQRSRHVNTVFTTIGQLYRRPKDCAQILLNGERTSGLYTIYVGG
EETQPVQVYCDMTTDGGGWLVLLRRQNGKLEFYRNWKNYTAGFGNMNNEFWLGLSNLHKI
TNSGHYELRVDLRDKGESAYAQYDKLTIAEPRTRYKIYIGAYSGTAGDSMTYHQGRPFST
YDNDNDIAVTNCALSYKGAFWYKNCHRVNLMGKYGDDSHSKGINWFHWKGHEHSIEFAEM
KIRPANFRNFESRKKRS
NT seq
7254 nt
NT seq
+upstream
nt +downstream
nt
atgggtacgagaggccttctgggctgcctcctcatcaccgccttgctcggctcgtcacac
gccgggctcgtgaagaaaatcctgcggcatcgacgacagaccctgacgccccccgatgag
cacaacgtcagtctgcccagcacggaccaccctgtggttttcaaccacgtctacaacatc
aacgtccccgccagctctctgtgctcggtgaacctggacgccccggagagcacgccgctg
ctccccaacgacgctccggcctctccaggccgtcgggtcgacgagcacacggtggacagg
gacaaccagatcgtcttcacccatcggatcaacataccgcggcgggcctgtggatgtgcg
gacgacctgccaggcctcaaagatctcatgagccggctggagatgctggaaggagaagtt
tcagctttgagggatcagtgcagtgtggacgggggctgctgcggcgcccaggtcacaggt
gacgtgggaactaaaccgtactgcaacggtcatgggaactacagctctgaatcctgcggc
tgtgtgtgcgggcccggctggacgggacccaactgcaccgaacccgagtgtcccgacaac
tgccagaaccgaggccgctgctcggacggaaagtgcgagtgcttcaaaggcttcggcgga
gacgactgctcgctccaggtctgcaccgtggactgcggggaacacgggcagtgcgcgggc
ggcgtttgcgtctgctcggacggttacctgggcgatgactgctctcagaccgagtgcctc
aacaactgccggggccgcggccgctgcgaggacggagaatgcatgtgcgaggaaccgtgg
accggctcggactgcgccgaactcatctgccccaaagactgctacgaccgtgggcgatgc
gcgaacgggacctgctactgcgatgacgggttcgccggggaagactgcggggaacgcacc
tgtccgcacgactgcaacggcaacggtttctgcgtggacggccgctgcgtctgcatcgcc
ggcttcagcggggacgactgcgcccagctcacctgcatcaacgattgtaacgaccgagga
atgtgcttcaacggcgtgtgcatctgcgacgccgggtaccaaggcgaggactgcagccag
ctggcgtgcttgaataactgcaaccacagaggccagtgtatcaacgggcagtgcgcctgc
gacgtcggcttcgtgggcgacgactgctccgagctctcctgcccgagcaactgcctgaac
cgcggccggtgcgttaacgggcagtgcgtgtgcgaggaaggctttgccggcgaggactgc
agcatcaggacctgcccctccaactgctacggccgcggcgagtgcgtagacggacgctgc
gagtgtcacacgggcttcacgggcgcggactgcggcgagctgagctgccctaacgactgt
cagagccgcgggcgctgcgtcgacgggcagtgcgtttgcgacgagggcttcaccggggag
gactgcggtcagaaagcgtgtcccaacgactgcctgggccgcggtcactgcgccgacggg
aagtgcgtctgtcgggaaggctactccggggacgactgctccgtgctcgcgtgcccgagc
aactgcaacagcagggggcgctgcgtcgatgggaagtgcgcttgtgacagcgggtaccga
ggagagagctgtgcggagctgagctgcctcaacgactgtcaggaccaaggtcgctgcgag
gacggccggtgcgtctgtgacgagggatacatcggagacgactgctcagaagtgtctcct
ccaaaggacctgacagtcagcgaggtcaccagtgacacggtggacctggcctggaacaac
gagatgctggtcactgagtacctcgtgacctttgtgcccaccagtcccggcggtctcctc
caggagttcaccgtgtcaggagataaaacagcagccacagtgaaagagctggagccggga
ctggagtacctgatcagcgtctacgctgttctgagcaacaagaggagtgtccccatcagc
gcccgggtcgctacagatcttccacagccagagggtctcatcttcaaatcagtgagagag
accacggtggaggtggtgtgggaccagctggacttccccttcgatggctgggagatctat
ttccgcaacacgaaaaaggaaaatggaaaagtcttgagcaccgtttcaagctcccagaac
cagttcctccagtcgggcctcggaccgggccaggagtacgaagtctccctcaacatcgtc
aagaacgacaccagaggacccccgacgtccaaaagagtcacgaccaggattgacggcccc
cggcaggtggaggtgaaggacgtcacagactcctccgctctgattggatggtctcagccg
ctggctcccgtggacagaatcaccttgtcttacgggcccggctccgccccctcagatgaa
accagcgtggaggttcctcctccagacaagcagtacagcatcgacggcctgcagcccgac
accgagtacagcgtgtcgctcgtttcaaggagcggagacgtcagcagtgatcctgtcctg
accacattcactacagccctggatggtcccagaaacctgcaggtcgtttcccagacagag
gacagcatcactctggagtggaccaacagtcgagccgacgtcggcagctatcgagtgaaa
ttcagccccatctctggagcgagtcacggtgaggatctgttcccacgaggaccgggagaa
accaccggagctactatcacagggctgaagccggggacggagtatgggatcggagtgact
gctgtgaagaatgagagcgagagcctccctgctactaccaacgcagcgactgacatcgac
cctcccaccgatttcgaggaagtggagtccacagagacgtccctcaccttgaggtggcgg
aaaccggaggccaaggtgggtgcctacaggctggtgtacgccaccggagacggcctgatc
gagatcgaggagatcccggccgcggcgacgagccacgttctcaccaacctgactcctggg
atgagctacaccctcactctggctgcagagagaggtctcaagaggagctcgcccgtcaca
atatctgcatccacagcctctttcacattttatttagctgactctgacgaccgcgagcta
acgactcctacaggcgccgaggacaatgtcattagcttttcaaatttagacccctctgag
cctcgcttctctggggcggatcctgaggacgagctcggagcgctgacgatttcgggcgtc
acgcctgaaggatttgacctctcgtggaaactgagcgctcgcacagtttacgacggtttc
acagtcgagtatacagacacacagggactgtcagacgtgagacagattcaacttcctgga
gatgccactgcctctagaatccaaggcctcgaggcatcaacagaatatcaaataaaactc
agtggaataagcggtagtcaaagatctgcactacttgaagcggttgcagttacagcaacc
aagcctacctctcctgacgtgctaacgctgagaatcaaaaatgtccaaacgaccccacaa
actgctcgggatactcaacaaactcaaaccccagaaccccttaacactgaggcccctccc
acaacagaggcccctccaatttcaacggctcctcccacacatgtggcccctcccatttca
gaggctcctcctacaaatgtggcccctcccatttcagaggctcctcccacttctgattct
gatgtaatgagctctggggctgagcctgagagctcgatcttggatgtagtgagaaacctc
acagtcaatgtttcctcctctagcgtcagcctgacgtggtcggcgcctgatgacgcgttc
gatagcttttcggtcgaggtcagtgcttcatcaaaaactcacctgacctcactgccagga
aatataaggaaggctgaaatcgagggtttgacgccctcgacacaatataatataacatta
catgggctggtggaagggaagagatctttacctctcagagtttttgccacaacagctgag
ctgaagccctcggtggtgaacctcaccatctctgacaaaacatgggacggcttcactgcg
tcctggcgccccgtcgatggggagtttgagagctttgtcattgaggtaacaaacttggag
aatttcgcagagagccagaacctcactgtgtccggagacgctctcagtctgggcatctcg
gggctcaatcccaacaccagctacatggttggcctgtttgggatgcatcagggctccttc
cttgaaccactgtacattgaagccaccacagtgattctgccaacacttggcaaactattt
atctcaaacttaacgtccgagagcttttcaatccactggaacggcactgatggaacattt
gatggttttatcctggagataattgattctgactggctgacggagccgcgagaatgtaat
atatcccacgttgtgaagtcctatgacgtcacggggctccggcccagcactgattatgta
gcctacctctatgggacttataagggatcccgaacaagcgctgtcagtattgttgcatca
acagctgaagagcctgatttatccaggctagtcgtttctaacattacctcagacagattt
tctctgtcatggcggacaggaggaaaggcgtttgataatttcatagtagaagtcagagaa
tctgctttgccctcgcaggcgatggggcgcgctctcaccggagacgtgcgctcaacggta
atggccgggctcaaagcgagcacaaggtacaacataaagctgtacgccagcgatggcggg
cagaacacgccgcccctgtttgaagtagctacaacagaggatgtccccctgttggggccc
atagcggcgtcgtccgtgagcccgcatgacctcagcgtgtcctggagaactgtgtcagga
cactttgacggctttgttatccgggtcagtgacccagagcagcattctgacacgctggag
ttcagactgccgggcgaggctcgtaactttaccgtctctaacctgatggatgccacaggc
tatgatattgagctgtatggtctctctcatgggcgccaaactccctctgtgttagcccac
gccgtcacagctcctttgcccagagtggaaaacttaaccatatccaacataaccccctac
ggcttccgggtgtcatgggaggtgaaacagcagcagcagcagcagcagcagcagcaccag
gaggaggacttagccccctctagtggcggtttcagccgttttcacatagtggtgacagac
tccgggtggctgctggagccgcaggagttcaccgtgccaggaaaccaaagtcacctggac
atctggggcctcatcacagggataggctatgaggtcaggctgacgggggtgtcagagtca
gggctgctctctcggcctctgaacacagtggctgtgacagaggccgagccggaggtggat
catctcttcctctcagacgtcacggccgacggtttccgcgtgtcgtgggcggccgacgat
gaccttttcgaccgatttgtgatcaaagtaagagacggcaaaaggttagcccaccctcag
gagtacagcgtccgcggggacgagcgcaccaaggttctgacgggactcatggggggcacc
gagtatgaaatcgagctctacggcgtctcgttggaccaacgctcccaaccgataacgggg
gtcgctcagacaggtctgagcactccaaaggggcttcacttctctgaggtgaccgactcc
tctgccgtggttcactggtccatgcctcgctctcccgtcgataactaccgagtcacctac
atcccctttgaaggagggagcccgatgtcgctgaccgtggacggcggcgtgttcgagact
ctgctgcccaacatgatccccggcaaagtttaccaagtgaccgtgagcgccgtgaagggt
ctggaggagagcgacccgagcaccgacaccgtgaccacaggtctggacaaacctcagggt
ctgatcgcggttaacgtcaccgacacgtcagcgctgctcctgtggcagccgtctgtggcc
attgtggacggctacgtcattacttacagcgttgactcagtgtcccccatggtggagcat
gtttccgggaacatcgtggagttcgagatggactcactgtttccaggaactcactacaca
gtcggagttcatgcgatgagagaagctcagaagagtgactcagccgttactgacttcacc
acagacgtggacccccctcgtgatctgacagccgtcaacattcaaaccgacagcgccacg
ctcacctggagacccccgcaggctgcagtcaccggttacacgctcaccttcacctccgct
gatggaaccatcagggaagtggtgctcagcgagacggcgtcctcttacagcatggctcag
ctgactggctccaccgagtacaacgtccgactgcaggccatcgccggagcgcagaggagt
cgacacgttaacaccgtcttcaccaccatcggacagctgtacagacggcccaaagactgc
gctcagattctgctgaacggagagaggacctcgggtctgtacaccatctacgtgggcgga
gaggagacgcagcccgtccaggtctactgtgacatgaccacggatggcggaggatggctg
gttttgctccgacgccagaatggaaagctggaattctacaggaactggaagaactacacg
gccggctttggaaacatgaataatgagttctggctgggtctctccaacctccataaaatc
acaaactctggacattacgagctgcgagtggatttgagggataaaggcgaatcggcctac
gctcagtacgacaagttgacgatcgcagagccgagaacacgttacaaaatctacatcgga
gcgtacagcgggacagcaggtgactccatgacgtaccaccaggggcgacctttctccacc
tacgacaacgacaacgatatcgccgtcaccaactgcgccctgtcctataaaggcgccttc
tggtataaaaactgccaccgggtgaatctaatggggaaatatggggacgacagtcacagt
aaggggatcaactggttccactggaaaggccacgagcactcgatcgaatttgcagagatg
aagatcagaccggccaacttcaggaattttgagagcagaaaaaaacgatcatag
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